NC_001984 AJ439059 1 ATCGGTGTATAGCCATTTAGCTCTATGTATCGGTGTATCGGTGTCTTATT 50 |************************************************* 1 A------------------------------------------------- 1 51 TATAGGTACTAGAGTTACTATCACTTTAGACCTACTAACCGGCTCTAGGG 100 ************************************************** -------------------------------------------------- 101 GTCCTCAGCTATAATATTACCTGAGGACCCCGCCATCGGTGTATGGGTAT 150 *******************||||||**||||||*|*||||||||*||||| 2 -------------------CCTGAGTGCCCCGCGACCGGTGTATCGGTAT 32 151 TTCGCCCACGTGGGTGGTCCCTCTAAGACGTGGCGCATTCTGGAAACGCG 200 |**|**|||||||||||||||||||**|||||||||**|*||||**|*|| 33 TA-GAGCACGTGGGTGGTCCCTCTATTACGTGGCGCGCTGTGGAGTCTCG 81 201 CTGGGAGGTTATTTAAGACATTGTCTACTTGTGGTAACAGGTAACCGGCT 250 ||***||*||*||||****|**|*|||||||**|||||||||*|||||*| 82 CTCAAAGTTTGTTTATTGAAC-GACTACTTGGAGTAACAGGTGACCGGAT 130 251 AAGTGACCGGTTGGAGAGCGTGCCTTTCC-CACCCCTGGTAAATTACCTC 299 |*|||||||*|*|*|*|**|*****|||**|*********|||**|||*| 131 AGGTGACCGTTCGTACATGGACAAATTCGTCTTTTACTCAAAAAGACCGC 180 300 ATATGCCATTTGGAGTACAC------AAACCGAC-------AAAACCCGG 336 ***||||||||||*|||*|*******|**||*|********|||||||** 181 TATTGCCATTTGGTGTAGAACTTTTTATGCCTATGGAGCTTAAAACCCTC 230 337 GAGC-ATTTATGTCCTTTGACGAAAAAGGACTTTAACTATTTATCGTTTC 385 |*|**||||*||||*|||*|*||**||*|||||||**|***||*|||||* 231 GTGGTATTTCTGTCATTTCA-GAGGAATGACTTTATTTGGATACCGTTTT 279 386 AAATTAA-AGAAACGATAGACGTTGAATATATCGATTTTGTGGTGTTAA- 433 *|*||*|*|*|||||||***||||*|||*|*||*|***|*||*|*|**** 280 TATTTTATAAAAACGATCTTCGTTCAATTTGTCCACACTATGCTATACGC 329 434 ACAATGAGCGTTGGTTGAAAATTTAATATTTTCAACATTTGTCTATTTAT 483 ||*|||**||||*|||*|***|||||****||*|||||||**|*||*|*| 330 ACTATGT-CGTTCGTTTAT--TTTAAG---TTAAACATTT--CAATATCT 371 484 GCATAGAGATTTTATTTGCGGATAAAATCAAACTACTTGAGGGTTTTATA 533 *|||**|*||*|*|*******||**||***|***||*||||**||**|** 372 TCATCTACATATAA-------ATCTAACGCATGAACGTGAGTTTTCAACC 414 534 GAGTA-TGTACAACCGTAACATACGAACCCCAGTGAAATTACGTAGAAGT 582 **|*|*|||**|||||*||****||*||*||**|*|||||||||***||| 415 ATGAAATGTTTAACCGCAATTATCGCACACCTCTTAAATTACGTCATAGT 464 583 AATTTCGGGCACAGATGGAGTTCTTTAACTCCGTCAACGAGTCGATTAAG 632 |||||*|||**|*|||||****||*|*||*|||||||***|*||*|||*| 465 AATTTTGGGTTCCGATGGCAGCCTATGACCCCGTCAAGAGGACGTTTACG 514 633 ACCGAGTAAATTAAATGTTTCAAGGAAACTAGGATACGACCGTATTGATC 682 *|**|*|||****|*||*||||*|*|||*|***|||*|||||**|*||*| 515 TCATAATAAGCCTAGTGCTTCACGTAAATTGTCATATGACCGCGTGGAAC 564 683 GTGAATTTCGCAAAAATTCCATTGTTGAGGTTCAACATGGAAGCCATATG 732 |*|||*|*||*|**|||||||||||||||||||||||||||||||||||| 565 GGGAAATGCGTACCAATTCCATTGTTGAGGTTCAACATGGAAGCCATATG 614 733 TCCTTGGACAAGAACACAGACATTTCATCTTTTGTTCAGTATCCTACTCG 782 |||*|*||*||||||||*||**|*||*||*|||||*||*||*|||*|||| 615 TCCCTTGAGAAGAACACGGATGTGTCTTCATTTGTGCAATACCCTGCTCG 664 783 TGGTATTAATCGTGAATGGTCGTTCGAGG-ATTACATCAAGTTATTAAAC 831 |||*||*||**||||*|||*||||**|||*|||||||||||||**|*||* 665 TGGAATCAACGGTGA-TGGACGTTGTAGGGATTACATCAAGTTGCTCAAA 713 832 CTTGATGTATCTGGTGTTATCAACGTAAACGCTACTGGCAGTGATCATAC 881 ||||||||*||||||||*||*|||*|*||**||*|*****|*||*||*** 714 CTTGATGTCTCTGGTGTGATAAACATTAAGTCTTCGAATGGAGACCAGGA 763 882 AATGGAATCTGGTGACAAAATGAACGGGCTATTCGTGTTATCTATCCTGT 931 *||||||*|*||||||||**|*|**||*|||||**|**|**||*||*||| 764 CATGGAACCAGGTGACAAGTTAAGTGGCCTATTTATCCTTACTGTCTTGT 813 932 TGGACAAGAAACCGTATTTACCAGATGGTGTGAATACGATACCATCCTTT 981 |*|||||||||||*|||*|*|||||*||||||||||***||||*|||||| 814 TAGACAAGAAACCCTATCTTCCAGAAGGTGTGAATAAATTACCCTCCTTT 863 982 GCCGAATTATTCGGTCCTTATGCTGCTGCCTACGCAAATATGCATTTGCT 1031 ||*||*|||||*||*||||||*|||||||*||*||*||||||||**|**| 864 GCGGAGTTATTTGGACCTTATTCTGCTGCATATGCGAATATGCACCTCTT 913 1032 GGATACTCAAAAGCAGCGATTTAAGGTCCTGGGACCAATTAAGAAATATT 1081 ||||*||||*||||**||*||*||||||||*||**||||*|||||*|*** 914 GGATTCTCAGAAGCCACGCTTCAAGGTCCTTGGGACAATAAAGAAGTTCG 963 1082 GTTCCTGTACTTCTGGAGCAATATATGCTCCATTAAAATTAAGGCTGAGA 1131 ****|||*||**|*||**||*|*||||**||**|*|||||||***||*** 964 TGAACTGCACACCCGGGACACTGTATGGGCCTCTGAAATTAAATATGCCT 1013 1132 TTGTCGAAGCCAAAGTGTCCTTTGTGGACTACGTTTAAGGACCCTGATCT 1181 *|*||*|*||*||||||||||||||||||||||||*|||||||||||||* 1014 CTATCAAGGCGAAAGTGTCCTTTGTGGACTACGTTCAAGGACCCTGATCA 1063 1182 TGGGAACTGCGGTGGAAATTATAAAAATATTTCCAAGAACGCTATTGTAA 1231 *||*||||||||||||||||||||*||*||||||||*||*|||||||||* 1064 GGGTAACTGCGGTGGAAATTATAAGAACATTTCCAAAAATGCTATTGTAT 1113 1232 TAAGCTATGCATTTATCTCTATGCATAGCCTTCATGTGGAACCATATGTT 1281 |*||||||||||||||*||*|||||||||||***|||*|||||||||*|| 1114 TGAGCTATGCATTTATATCAATGCATAGCCTAATTGTAGAACCATATTTT 1163 1282 CAATTTGAACTACAATACATTGGATAAA-TAAATAAGTATT-ATTTATTT 1329 |||||||||*|**|||||*|*|||||||*||||||*|*|||*|||||||| 1164 CAATTTGAATTGAAATACGTGGGATAAAATAAATATGAATTTATTTATTT 1213 1330 AAATT----TAAAGAGCTTTGTTTGCATTAGATCTCTGTGTTATTAGACA 1375 **|||****||*|**||||||||**||||*||*|**||**||||*||||| 1214 TCATTGTGTTACAACGCTTTGTTCACATTGGACCGTTGACTTATGAGACA 1263 1376 TTTGCTAATTGTTGACTCTATGATGTCCTCTATGTCCTTGCGACTCATTG 1425 |||||||||*||*|**|||||*|||||||||||*||**|****||||||| 1264 TTTGCTAATAGTCGTTTCTATAATGTCCTCTATTTCTCTCTTGCTCATTG 1313 1426 AATTCGATTGAGCTTGAGAAATTGAGTCTCCGGGGTCTAGAGACGACTCC 1475 **||*||*||*|**||*||*|*|||*|||||*||*||*|**||*|*|||* 1314 CGTTAGAGTGGGACTGGGATACTGAATCTCCAGGATCCAATGATGCCTCT 1363 1476 GGTAATTTATGCAAATGTCTTAGTGGATATTCTGCCTCGGACGTACTCCC 1525 ||*||*||*|||||||||||*|||||*||*|||||*||*||*|**||*** 1364 GGCAACTTGTGCAAATGTCTAAGTGGGTAATCTGCGTCTGAAGCGCTGGT 1413 1526 ATTATTGGTTAGGCCCAATCTTTCCGTGGACGTCAACCGCATAGAACTAC 1575 *||*|*****|**|*****||*||**|***|||**|||||||*||*||*| 1414 GTTGTCTACAATACTGGGCCTGTCGTTATTCGTGTACCGCATGGAGCTGC 1463 1576 TGCGCCCAATACTGGACCTTGTAGCCCAAGTCTCTCCAGGCTGTAGCATA 1625 |||||||||||***||||||||||||||||||||*||*|||||||||||| 1464 TGCGCCCAATAGATGACCTTGTAGCCCAAGTCTCACCTGGCTGTAGCATA 1513 1626 ATGGGCCTTTGTCCATTTATTGAATAGGGATCCTGGTTGGGTCCAGGATT 1675 ||||||||*||*|||*||||*|*|||*|||*|||||||||||||*||||| 1514 ATGGGCCTGTGGCCACTTATCGGATATGGACCCTGGTTGGGTCCTGGATT 1563 1676 CAGCAACCGCCTAATGGGCTTAGGCTTCTCAACAGACCAAAAGTACACAC 1725 *||||**||||||||||||||*||||||||||||||||||||||*||||| 1564 AAGCATACGCCTAATGGGCTTGGGCTTCTCAACAGACCAAAAGTCCACAC 1613 1726 AGTTTTCGTTGTAGTCCTTGGACAATATATTTATTGTCGGAGGTTTGAAT 1775 |*|*|||**||||||||||*||||||||*|||||||||||*||||||||| 1614 ATTCTTCTGTGTAGTCCTTTGACAATATGTTTATTGTCGGGGGTTTGAAT 1663 1776 CTAATGTCTGTTGAGTGTTTGGCTGACGACAATTTCAGCTTCGCCTTAAT 1825 ||||||||||||||||||||*||*||*||||||||||*|||*|||||*|| 1664 CTAATGTCTGTTGAGTGTTTTGCGGAAGACAATTTCAACTTGGCCTTTAT 1713 1826 CTGGGCAAATGTTGTCCCGTCGATCACATTGGAGTCTTCGACCTTGTAAA 1875 |||||||||||||||*||||||||||||||||||||*|||||||||||*| 1714 CTGGGCAAATGTTGTTCCGTCGATCACATTGGAGTCCTCGACCTTGTAGA 1763 1876 CTATTTCCCATGGAGTCTCATCCTTTAAAGAAAAAAAGGATGATGAGAAA 1925 ||||*||||||||*||*||*|||||*|**||*||*||||||||||||||* 1764 CTATCTCCCATGGTGTTTCGTCCTTCAGTGAGAAGAAGGATGATGAGAAG 1813 1926 TAATGGAGATCGACGTTACATGCTATTGGGAATGTGAACGCAGCCTGTGC 1975 |||||*|||||||||||||||||*||||||||*|||||*|||||*||||| 1814 TAATGAAGATCGACGTTACATGCAATTGGGAAGGTGAAAGCAGCTTGTGC 1863 1976 TGCTTGTTCGTAACTGAGTCTTGTGTCACGTATAGTGACCACTACGGTCC 2025 ||||||||||||*||*||*|||||||||||*||*|||||*|**||*||*| 1864 TGCTTGTTCGTAGCTTAGCCTTGTGTCACGAATTGTGACTATGACCGTTC 1913 2026 CCTTGGCGTTAAAGGGGACTTGATTTCGGTATTCAATAACGGCATGGTCA 2075 ||||*||*||*||*||*|||||*||||*|||*|||||*|||||||||||* 1914 CCTTTGCATTGAACGGAACTTGGTTTCTGTACTCAATCACGGCATGGTCT 1963 2076 ACCTTCATGCATTTGCCCATTATTTGGACAGTTTTCTGTTCCAAATAAGA 2125 ||||||||||||||||||||*||*||*||*||*||||||||||*|||||| 1964 ACCTTCATGCATTTGCCCATAATCTGAACGGTCTTCTGTTCCAGATAAGA 2013 2126 AGGGAATTGTAATTTGATAGGCATCTCGTTGTTCGTCAGCCTGTATTCGC 2175 *||*||||||||*|||||*||||||||||||||*|||||*|||||||||| 2014 CGGAAATTGTAACTTGATTGGCATCTCGTTGTTTGTCAGTCTGTATTCGC 2063 2176 AACTCTTTGTTTCTACATACTTGTTGTTTACAACCACCCCTGAATAATTC 2225 ||||||||||*||*|||||*|||||*||*|||||**|*|||||||||||| 2064 AACTCTTTGTCTCCACATATTTGTTATTAACAACTGCGCCTGAATAATTC 2113 2226 TCCATTATTCAGTAATA-TGTTGCGAATTATCACCTGCATATGAACATAT 2274 ||||||||||||*|||**|||||||||||****||||*|*|*|||||*|* 2114 TCCATTATTCAGAAATTGTGTTGCGAATTTATCCCTGAAAAGGAACACAC 2163 2275 CCAGAGAAATTAACAATTTAATTTCAGATAGGCCGCGCAGCGTCACTTGA 2324 *|***|||||||***|*|||||||||*|||||||||||||||*|**|*|| 2164 ACCAGGAAATTATTCAATTAATTTCAAATAGGCCGCGCAGCGGCTAT-GA 2212 2325 CAGT-GTTTAGATTTAAATCATAATCTAAACCAAAGAGGATAATAAGTGA 2373 *|*|*||||||||*|*|||||||||||||||||||||||*********** 2213 GATTAGTTTAGATATGAATCATAATCTAAACCAAAGAGG----------- 2251 2374 TAAGGGATACAAAATTATATGCATAAGATCTTACTTATGCCACGACTGGA 2423 *****||||*||||****||*|*|*||*||||**|*||****|*|****| 2252 -----GATAAAAAACCTAATACCTGAGTTCTTTGTAATCGTCCCAAAAAA 2296 2424 ATTCTGATGAATATTGTGTACAGAGGAAATAACAAATATTTACT--AATA 2471 *|***|****||||*|||*|||||||||*||||||||||||**|**|||| 2297 TTAAAGCACTATAT-GTGCACAGAGGAAGTAACAAATATTTTATTAAATA 2345 2472 TTTGTTCTCCAACTACAAATGATTGTTTGACAACAATCGAATTAAATAAT 2521 ||||||*|*****||****|*|*|**||*|*|*||*||||*||||||||* 2346 TTTGTTGTTGTGATATTTCTTAGTTATTCA-ATCACTCGATTTAAATAAA 2394 2522 ATGCACATCTGTTTCGGAA-GCGTTGTTCAAACATAAAATAACTCA-TAT 2569 |***|****||****|||**||||**|**|*|**|*|||||****|*||| 2395 AGAGAAGCATGCGCAGGATTGCGTCCTGGATA--TTAAATAGGGGAGTAT 2442 2570 TTTATTTGGCTTAAATGAACCATAGCGGAACCCCTTCCAATTGGTGTAAA 2619 ||*||*|**|**||**||***||***|***|*|||*|***|*|||||**| 2443 TTAATATCCCCAAATGGATATATCTGGTGCCTCCTACGTTTCGGTGTCTA 2492 2620 AGCGCTTCAATTCTAGAGAGAGATGC------------------------ 2645 ||*||*|***||||||||*||||*||************************ 2493 AGAGCATGT-TTCTAGAGTGAGAAGCATAGCAAAACGCAAGATGCGAGGC 2541 2646 -----------------------------TCTCGA--------------- 2651 *****************************||||*|*************** 2542 AAAAGAGCGTGTCGTTTTGTATCGGTGTCTCTCCAAAAGTCCTATGTATC 2591 2652 -----------------------CTAGCGCTTCTAGAGAGAGAAG---CA 2675 ***********************||||*|||*|||*|*****|||***|| 2592 GGTGTATCGGTGTCTTATATATACTAGAGCTACTAAAAGCCTAAGGGGCA 2641 --------------- *************** 2642 CTCAGCTATAATATT 2656