NC_001984 AJ439058 1 ATCGGTGTATAGCCATTTAGCTCTATGTATCGGTGTATCGGTGTCTTATT 50 |************************************************* 1 A------------------------------------------------- 1 51 TATAGGTACTAGAGTTACTATCACTTTAGACCTACTAACCGGCTCTAGGG 100 ************************************************** -------------------------------------------------- 101 GTCCTCAGCTATAATATTACCTGAGGACCCCGCCATCGGTGTATGGGTAT 150 *******************||||||**||||||*|*||||||||*||||| 2 -------------------CCTGAGTGCCCCGCGACCGGTGTATCGGTAT 32 151 TTCGCCCACGTGGGTGGTCCCTCTAAGACGTGGCGCATTCTGGAAACGCG 200 |**|**|||||||||||||||||||**|||||||||**|*||||**|*|| 33 TA-GAGCACGTGGGTGGTCCCTCTATTACGTGGCGCGCTGTGGAGTCCCG 81 201 CTGGGAGGTTATTTAAGACATTGTCTACTTGTGGTAACAGGTAACCGGCT 250 ||***||*||*||||****|**|*|||||||**|||||||||||||||*| 82 CTCAAAGTTTGTTTATTGAAC-GACTACTTGGAGTAACAGGTAACCGGAT 130 251 AAGTGACCGGTTGGAGAGCGTGCCTTTCC-CACCCCTGGTAAATTACCTC 299 |*|||||||*|*|*|*|**|*****|||**|*********|||**|||*| 131 AGGTGACCGTTCGTACATGGACAAATTCGTCTTTTACTCAAAAAGACCGC 180 300 ATATGCCATTTGGAGTACAC------AAACCGAC-------AAAACCCGG 336 ***|||||||||***||||*******|**||*|********|||||||** 181 TATTGCCATTTGTTATACAACTTTTTATGCCTATGGAGCTTAAAACCCTC 230 337 GAGC-ATTTATGTCCTTTGACGAAAAAGGACTTTAACTATTTATCGTTTC 385 |*|**||||*||||*|||*|*||*|||*|||||||**|***||*|||||* 231 GTGGTATTTGTGTCATTTCA-GAGAAATGACTTTATTTGGATACCGTTTT 279 386 AAATTAA-AGAAACGATAGACGTTGAATATATCGATTTTGTGGTGTTAA- 433 *|*||*|*|*|||||||***||||*|||*|*||*|***|*||*|*|**** 280 TATTTTATAAAAACGATCTTCGTTCAATTTGTCCACACTATGCTATACGC 329 434 ACAATGAGCGTTGGTTGAAAATTTAATATTTTCAACATTTGTCTATTTAT 483 ||*|||**||||*|||*|***|||||****||*|||||||**|*||*|*| 330 ACTATGT-CGTTCGTTTAT--TTTAAG---TTAAACATTT--CAATATCT 371 484 GCATAGAGATTTTATTTGCGGATAAAATCAAACTACTTGAGGGTTTTATA 533 *|||**|*||*|*|*******||**||***|***||*||||**||**|** 372 TCATCTACATATAA-------ATCTAACGCATGAACGTGAGTTTTCAACC 414 534 GAGTA-TGTACAACCGTAACATACGAACCCCAGTGAAATTACGTAGAAGT 582 **|*|*|||**|||||*||****||*||*||**|*|||||||||*|*||| 415 ATGAAATGTTTAACCGCAATTATCGCACACCTCTTAAATTACGTCGTAGT 464 583 AATTTCGGGCACAGATGGAGTTCTTTAACTCCGTCAACGAGTCGATTAAG 632 |||||*|||**|||||||****||*|*||*|||||||***|*||*|||*| 465 AATTTTGGGTTCAGATGGCAGCCTATGACCCCGTCAAGAGGACGTTTACG 514 633 ACCGAGTAAATTAAATGTTTCAAGGAAACTAGGATACGACCGTATTGATC 682 *|**|*|||****|*||*||||*|*|||*|***|||*||||***|*||*| 515 TCATAATAAGCCTAGTGCTTCACGTAAATTGTCATATGACCACGTGGAAC 564 683 GTGAATTTCGCAAAAATTCCATTGTTGAGGTTCAACATGGAAGCCATATG 732 |*|||*|*||*|**|||||||||||||||||||||||||||||||||||| 565 GGGAAATGCGTACCAATTCCATTGTTGAGGTTCAACATGGAAGCCATATG 614 733 TCCTTGGACAAGAACACAGACATTTCATCTTTTGTTCAGTATCCTACTCG 782 |||*|*||*||||||||*|||*|*||*||*|||||*||*||*|||**||| 615 TCCCTTGAGAAGAACACGGACGTGTCTTCATTTGTGCAATACCCTGTTCG 664 783 TGGTATTAATCGTGAATGGTCGTTCGAGG-ATTACATCAAGTTATTAAAC 831 |||*||*||**||||*|||*||||**|||*||||||||||||||*|*||* 665 TGGAATCAACGGTGA-TGGACGTTGTAGGGATTACATCAAGTTACTCAAA 713 832 CTTGATGTATCTGGTGTTATCAACGTAAACGCTACTGGCAGTGATCATAC 881 ||||||||*||||||||*||*|||*|*||**||*|*****|*||*||*** 714 CTTGATGTCTCTGGTGTGATAAACATTAAGTCTTCGAATGGAGACCAGGA 763 882 AATGGAATCTGGTGACAAAATGAACGGGCTATTCGTGTTATCTATCCTGT 931 *||||||*|*||||||||**|*|**||*|||||**|**|**||*||*||| 764 CATGGAACCAGGTGACAAGTTAAGTGGCCTATTTATCCTTACTGTCTTGT 813 932 TGGACAAGAAACCGTATTTACCAGATGGTGTGAATACGATACCATCCTTT 981 |*|||||||||||*|||*|*|||||*||||||||||***||||*|||||* 814 TAGACAAGAAACCCTATCTTCCAGAAGGTGTGAATAATTTACCCTCCTTC 863 982 GCCGAATTATTCGGTCCTTATGCTGCTGCCTACGCAAATATGCATTTGCT 1031 ||*||*|||||*||*||||||*|||||||*||*||*||||||||**|**| 864 GCGGAGTTATTTGGACCTTATTCTGCTGCATATGCGAATATGCACCTCTT 913 1032 GGATACTCAAAAGCAGCGATTTAAGGTCCTGGGACCAATTAAGAAATATT 1081 ||||*||||*||||**||*||*||||||||*||**||||*|||||*|*** 914 GGATTCTCAGAAGCCACGCTTCAAGGTCCTTGGGACAATAAAGAAGTTCG 963 1082 GTTCCTGTACTTCTGGAGCAATATATGCTCCATTAAAATTAAGGCTGAGA 1131 ****|||*||**||||**||*|*||||**||**|*|||||||***||*** 964 TGAACTGCACACCTGGGACACTGTATGGGCCTCTGAAATTAAACATGCCT 1013 1132 TTGTCGAAGCCAAAGTGTCCTTTGTGGACTACGTTTAAGGACCCTGATCT 1181 ||*||*|*||*||||||||||||||||||||||||*|||||||||||||* 1014 TTATCAAGGCGAAAGTGTCCTTTGTGGACTACGTTCAAGGACCCTGATCA 1063 1182 TGGGAACTGCGGTGGAAATTATAAAAATATTTCCAAGAACGCTATTGTAA 1231 *||*||||||||||||||||||||*||*||||||||*||*|||||||||* 1064 GGGTAACTGCGGTGGAAATTATAAGAACATTTCCAAAAATGCTATTGTAC 1113 1232 TAAGCTATGCATTTATCTCTATGCATAGCCTTCATGTGGAACCATATGTT 1281 |*||||||||||||||*||*|||||||||||***|||*|||||||||*|| 1114 TGAGCTATGCATTTATATCAATGCATAGCCTAATTGTAGAACCATATTTT 1163 1282 CAATTTGAACTACAATACATTGGATAAA-TAAATAAGTATT-ATTTATTT 1329 |||||||||*|**|||||*|*|||||||*||||||*|*|||*|||||||| 1164 CAATTTGAATTGAAATACGTGGGATAAAATAAATATGAATTTATTTATTT 1213 1330 AAATT----TAAAGAGCTTTGTTTGCATTAGATCTCTGTGTTATTAGACA 1375 ***||****||*|**||||||||**||||*||*|**||**||||*||||| 1214 TCGTTGTGTTACAACGCTTTGTTCACATTGGACCGTTGACTTATGAGACA 1263 1376 TTTGCTAATTGTTGACTCTATGATGTCCTCTATGTCCTTGCGACTCATTG 1425 |||||||||*||*|**|||||||||||||||||*||**|****||||||| 1264 TTTGCTAATAGTCGTTTCTATGATGTCCTCTATTTCTCTCTTGCTCATTG 1313 1426 AATTCGATTGAGCTTGAGAAATTGAGTCTCCGGGGTCTAGAGACGACTCC 1475 **||*||*||*|**||*||*|*|||*|||||*||*||*|**||*|*|||* 1314 CGTTAGAGTGGGACTGGGATACTGAATCTCCAGGATCCAATGATGCCTCT 1363 1476 GGTAATTTATGCAAATGTCTTAGTGGATATTCTGCCTCGGACGTACTCCC 1525 ||*||*||*|||||||||||*|||||*||*|||||*||*||*|**||*** 1364 GGCAACTTGTGCAAATGTCTAAGTGGGTAATCTGCGTCTGAAGCGCTGGT 1413 1526 ATTATTGGTTAGGCCCAATCTTTCCGTGGACGTCAACCGCATAGAACTAC 1575 *||*|*****|**|*****||*||**|****||**|||||||*||*||*| 1414 GTTGTCTAGAATACTGGGCCTGTCGTTATTTGTGTACCGCATGGAGCTGC 1463 1576 TGCGCCCAATACTGGACCTTGTAGCCCAAGTCTCTCCAGGCTGTAGCATA 1625 |||||||||||***||||||||||||||||||||*||*|||||||||||| 1464 TGCGCCCAATAGATGACCTTGTAGCCCAAGTCTCACCTGGCTGTAGCATA 1513 1626 ATGGGCCTTTGTCCATTTATTGAATAGGGATCCTGGTTGGGTCCAGGATT 1675 ||||||||*||*|||*||||*|*|||*|||*|||||||||||||*||||| 1514 ATGGGCCTGTGGCCACTTATCGGATATGGACCCTGGTTGGGTCCTGGATT 1563 1676 CAGCAACCGCCTAATGGGCTTAGGCTTCTCAACAGACCAAAAGTACACAC 1725 *||||**||||||||||||||*||||||||||||||||||||||*||||| 1564 AAGCATACGCCTAATGGGCTTGGGCTTCTCAACAGACCAAAAGTCCACAC 1613 1726 AGTTTTCGTTGTAGTCCTTGGACAATATATTTATTGTCGGAGGTTTGAAT 1775 |*|*|||**||||||||||*||||||||*|||||||||||*||||||||| 1614 ATTCTTCTGTGTAGTCCTTAGACAATATGTTTATTGTCGGGGGTTTGAAT 1663 1776 CTAATGTCTGTTGAGTGTTTGGCTGACGACAATTTCAGCTTCGCCTTAAT 1825 ||||||||||||||||||||*||*||*||||||||||*|||*|||||*|| 1664 CTAATGTCTGTTGAGTGTTTTGCGGAAGACAATTTCAACTTGGCCTTTAT 1713 1826 CTGGGCAAATGTTGTCCCGTCGATCACATTGGAGTCTTCGACCTTGTAAA 1875 |||||||||||||||*||||||||||||||||||||*|||||||||||*| 1714 CTGGGCAAATGTTGTTCCGTCGATCACATTGGAGTCCTCGACCTTGTAGA 1763 1876 CTATTTCCCATGGAGTCTCATCCTTTAAAGAAAAAAAGGATGATGAGAAA 1925 ||||*||||||||*||*||||||||*|**||*||*||||||||||||||* 1764 CTATCTCCCATGGTGTTTCATCCTTCAGTGAGAAGAAGGATGATGAGAAG 1813 1926 TAATGGAGATCGACGTTACATGCTATTGGGAATGTGAACGCAGCCTGTGC 1975 |||||*|||||||||||||||||*||||||||*|||||*|||||*||||| 1814 TAATGAAGATCGACGTTACATGCAATTGGGAAGGTGAAAGCAGCTTGTGC 1863 1976 TGCTTGTTCGTAACTGAGTCTTGTGTCACGTATAGTGACCACTACGGTCC 2025 ||||||||||||*||*||*|||||||||||*||*|||||*|**||*||*| 1864 TGCTTGTTCGTAGCTTAGCCTTGTGTCACGAATTGTGACTATGACCGTTC 1913 2026 CCTTGGCGTTAAAGGGGACTTGATTTCGGTATTCAATAACGGCATGGTCA 2075 |||||||*||*||*||*|||||*||||*|||*|||||*|||||||||||* 1914 CCTTGGCATTGAACGGAACTTGGTTTCTGTACTCAATCACGGCATGGTCT 1963 2076 ACCTTCATGCATTTGCCCATTATTTGGACAGTTTTCTGTTCCAAATAAGA 2125 ||||||||||||||||||||*||*||*||*||*||||||||||*|||||| 1964 ACCTTCATGCATTTGCCCATAATCTGAACGGTCTTCTGTTCCAGATAAGA 2013 2126 AGGGAATTGTAATTTGATAGGCATCTCGTTGTTCGTCAGCCTGTATTCGC 2175 *||*||||||||*|||||*||||||||||||||*|||||*|||||||||| 2014 CGGAAATTGTAACTTGATTGGCATCTCGTTGTTTGTCAGTCTGTATTCGC 2063 2176 AACTCTTTGTTTCTACATACTTGTTGTTTACAACCACCCCTGAATAATTC 2225 ||||||||||*||*|||||*|||||*||*|||||**|*|||||||||||| 2064 AACTCTTTGTCTCCACATATTTGTTATTAACAACTGCTCCTGAATAATTC 2113 2226 TCCATTATTCAGTAATA-TGTTGCGAATTATCACCTGCATATGAACATAT 2274 ||||||||||||*|||**|||||||||||****||||*|*|*|||||*|| 2114 TCCATTATTCAGAAATTGTGTTGCGAATTTATCCCTGAAAAGGAACACAT 2163 2275 CCAGAGAAATTAACAATTTAATTTCAGATAGGCCGCGCAGCGTCACTTGA 2324 *|***|||||||*****|||||||||*|||*|||||||||||*||*|*** 2164 ACCAGGAAATTATTCTATTAATTTCAAATAAGCCGCGCAGCGGCAATGAG 2213 2325 CAGTGTTTAGATTTAAATCATAATCTAAACCAAAGAGGATAATAAGTGAT 2374 ****||||||||*|*|||||||||||||||||||||||*********||| 2214 ATAAGTTTAGATATGAATCATAATCTAAACCAAAGAGG---------GAT 2254 2375 AAGGGATACAAAATTATATGCATAAGATCTTACTTATGCCACGACTGGAA 2424 ||*****|*|||**||*||*|*|*||*|*||*****||*|*|*||***|* 2255 AA-----AAAAACCTA-ATACCTGAGTTATTGTAATTGTCGC-ACAAAAT 2297 2425 TTCTGATGAATATTGTGTACAGAGGAAATAACAAATATTTACT--AATAT 2472 |***|****||||*|||*|||||||||*||||||||||||**|**||||| 2298 TAAAGCACTATAT-GTGCACAGAGGAAGTAACAAATATTTTATTAAATAT 2346 2473 TTGTTCTCCAACTACAAATGATTGTTTGACAACAATCGAATTAAATAATA 2522 |||||*|*****||**|*|*|*|**||*|*|*|||||||*||||||||*| 2347 TTGTTGTTGTGATATTACTTAGTTATTCA-ATCAATCGATTTAAATAAAA 2395 2523 TGCACATCTGTTTCGGAA-GCGTTGTTCAAACATAAAATAACTCATATTT 2571 ***|****||****|||**||||**|**|*|**|*|||||****||**|| 2396 GAGAAGCATGCGCAGGATTGCGTCCTGGATA--TTAAATAGGGGATTATT 2443 2572 TATTTGGCTTAAATGAACCATAGC-GGAACCCCTTCCAATT-GGTGTAAA 2619 ||*|***|**|||||*|**|||*|*||**||*|*|*|**||*|||||*** 2444 TAATATCCCCAAATGGAT-ATATCTGGTGCCTCCTACGTTTCGGTGTCTT 2492 2620 AGCGCTTCAATTCTAGAGAGAGATGC------------------------ 2645 |||||*|***|||||||||||||*||************************ 2493 AGCGCATGT-TTCTAGAGAGAGAAGCATAGCAAAACGCAAGATGCTAGGC 2541 2646 -----------------------------TCTCGA--------------- 2651 *****************************||||*|*************** 2542 AAAAGAGCGTGTCGTTTTGTATCGGTGTCTCTCCAAAAGTCCTATGTATC 2591 2652 -----------------------CTAGCGCTTCTAGAGAG---AGAAGCA 2675 ***********************|||**|||*|||*|******||**||| 2592 GGTGTATCGGTGTCTTATATATACTACAGCTACTAAAAGCCTCAGGGGCA 2641 --------------- *************** 2642 CTCAGCTATAATATT 2656