NC_006573 AY628208 1 GCGCACCGGGGATCCTAGGCATTTTTGGTTGCGCAATTC---AAGTGTCC 47 *|||||*|*|||||||||||**|***|*||||||**|*****||*|||*| 1 -CGCACAGTGGATCCTAGGCGATG--GATTGCGCTTTGTGATAATTGTGC 47 48 TATTTAAAATGGGACAAATAG-------TGACATTCTTCCAGGAAGTGCC 90 ****||||*||***|**|*||*******||*||*||**||***|*||**| 48 AGAGTAAAGTGACTCTTACAGAACCACTTGTCACTCCACCTTTAGGTTGC 97 91 TCATGTAATAGAAGAGGTGATGAAC---ATTGTTCTCATTGCACTG-TCT 136 ||*****|*|**||***|||**|||***|**|***|||***||*|**|*| 98 TCCAAGCACATCAGCAATGAGCAACTCCAAGGAAATCAAATCATTCCTTT 147 137 GTACTAGCAGTGCTGA--AAGGTCTGTACAATTTTGCAACGTGTGGCCTT 184 |*|||**||||*||*|**||||***|*||*||*|*|**||*|||****** 148 GGACT--CAGTCCTTACGAAGG---GAACTATCTGGTTAC-TGTTCTAAC 191 185 GTTGGTTTGGTCACTTTCCTCCTGTTGTGTGGTAGGTCTTGCACAACCAG 234 *|****|||**||**||******|*||****|****||*||||***||** 192 ATAAAGTTG--CAAGTTGTCAAAGATGCTCAGGCTCTCCTGCATGGCCTT 239 235 TCTTTATAAAGGGGTTTATGAGCTTCAGACTCTGGAACTAAACATGGAGA 284 ***||*|***|*|||*****|**|*||||**|||***|**||***|*||| 240 GACTTTTCT-GAGGTCAGCAATGTGCAGAGGCTGATGCGCAAGCAGAAGA 288 285 CACTCAATAT-GACCATGCCTCTCTCCTGCACAAAGAACAA-CAGTCATC 332 *|****||***||||********||***|*|*****|*|||*|*||||*| 289 GAGATGATGCAGACCTAAAGCGACTGAGGGATCTGAATCAAGCTGTCAAC 338 333 A---TTATATAATGGTGGGCAATGAGACAGGACTAGAACTGACCT-TGAC 378 |***||*|**||**|**|*|||****||||*|**|***||*|****|*** 339 AATCTTGTTGAACTGAAGTCAACTCAACAGAAGAATGTCTTAAGGGTCGG 388 379 CAACACGAGCATTATTAATC--ACAAATTTTGCAATCTGTCTG-ATGCCC 425 ||*|**|||******|*|||**|*||*|||*|||******|||*|****| 389 CACCTTGAGTTCAGATGATCTAATAACTTTGGCAGCGGACCTGGAAAAAC 438 426 ACAAAAAGAACCTCTATGACCACGCTCTTATGAGCATAATCTCAACTTTC 475 *|||****||**||*||*|**||******|*|****|*|*||||**|*|* 439 TCAAGTCCAAAGTC-ATAAGGACAGAA--AGGCCTTTGAGCTCAGGTGTT 485 476 CACTTGTCCATCCCCAACTTCAATCAGTATGAGGCAATGAGCTGCGATTT 525 *||*||***|*****|*||***|*|||**|||***||*|||**||**|*| 486 TACATGGGGAATTTAAGCTCACAACAGCTTGATCAAAGGAGG-GCTCTCT 534 526 TAATGGGGGAAAGATTAGTGTG-CAGTACAACCTGA--GTCACAGCTATG 572 |*|*****|*|*||||*|**||*|||****||||*|**|**|*||****| 535 TGA-----GCATGATTGGGATGTCAGGTGGACCTCAAGGAAATAGGACAG 579 573 CTGGGGATGCAGCCAACCAT-TGTGGTACTGTTGCAAATGGTGTGTTACA 621 *||||||||**|*|**|****|*|||*||*||***|||||**|**||||* 580 GTGGGGATGGTGTCGTCAGGGTTTGGGAC-GTAAAAAATGCAGAATTACT 628 622 GACTTTTATGAGGATGGCTTGGGGTGGGAGCT-ACATTGCTCTTGACTCA 670 *|*|***|**|***|||******|******||*||*|||**|*||*|||| 629 CAATA--ACCAATTTGGAACCATGCCAAGCCTCACCTTGG-CGTGCCTCA 675 671 GG---CCGTGGCAACTGGGACTGTATTATGACTAGTTATCAATATCTGAT 717 *****|***|||||*|||**||**||*|||****|**|*|**||*|*||| 676 CCAAACAAGGGCAAGTGGACCTCAATGATGCTGTGCAAGCTTTAACAGAT 725 718 AATCCAAAATACAACCTGGGAAGATCACTGCCAATTCTCGAGACCATCTC 767 *************|**|**||****|||*||*||*|******|||****| 726 TT-----------AGGTTTGATTTACACAGCAAAGT------ACCCGAAC 758 768 CCATCGGTTATCTCGGGCTCCTCTCACAAAGGACTAGAGATATTTATATT 817 *|*||*|**||||*|***|*|||*|*||*||*************||||*| 759 TCTTCAG--ATCTAGACATGCTCACTCAGAGTCACCC-------TATACT 799 818 AGTAGAAGATTGCTAGGCACATTCACATGGACACTGTCAGATTCTGAAGG 867 ||*****||*||*|*|*||||***|***|**|*|||**|***|||*|*|* 800 AG-----GAATGGTTGACACAAAAAAGAGTTCCCTG--AACATCTCAGGT 842 868 TGAAGACACAC-CAGGGGGATATTGTCTGACCAGGTGGATGC-TAATTGA 915 |**|****||**|*|||||*|***||***|*|*||||**|||*|**|||| 843 TACAACTTCAGTCTGGGGGCTGCAGTTAAAGCTGGTGCTTGCATGCTTGA 892 916 GGCTGAACTAAAATGCTTCGGGAACAC---AGCTGTGGCAAAATGTAATG 962 *|**|****||*|||*|**||*||||****|**|||**|*|*|***|||| 893 TGGGGGC--AACATGTT--GGAAACAATAAAAGTGTCACCACAAACAATG 938 963 AGAAGCATGATGAGGAATTTTGTGACATGCTGAGGCTGTTTGACT-TCAA 1011 ****|*||**|||****|*||*|||****|**|*|*|***||****|*** 939 GACGGTATTTTGAAATCTATTCTGAAGGTCAAAAGATCACTGGGAATGTT 988 1012 CAAACAAGCCATTCAAAGGTTGAAAGCTGAAGCACAAATGAGCATTCAGT 1061 ||*****|*||*||***|**||||||***||*|*||*|||||*|*****| 989 CATTTCTGACACTCCTGG--TGAAAG---AAACCCATATGAGAACATCCT 1033 1062 TGATCAACAAAGCAGTAAATGCTTTGATAAATGACCAACTTATA-ATGAA 1110 **||*|*****||**|**|*|***|||****||*||***|**|**||*|| 1034 CTATAAGATCTGCCTTTCAGG---TGAAGGTTGGCCGTATATTGCATCAA 1080 1111 GAAC--CATCTAC-GGGACATCATGGGAATTCCATACTGTAATTACAGCA 1157 ||||**||**|||*||||*|*|*||||||**|***|||*|**||****** 1081 GAACATCAATTACTGGGAGAGCTTGGGAAAAC---ACTCTTGTT------ 1121 1158 AGTATTGGTACCTCAACCACACAACTACTGGGAGAACAT--CACTGCC-C 1204 *|**||||*|*||*|*|*|||*|||*||*|**|**|*||**|*|||***| 1122 -GATTTGGAATCTGA-CAACA-AACCACCGAAACTAAATAGCGCTGGTTC 1168 1205 AAATGTTGGCTTGTATCAAATGGTTC---ATACTTGAACGAGACCCACTT 1251 *|||****|||||*|*******|*||***||*||*|***||******||* 1169 CAATAAAAGCTTGCAGGCTGCAGGTCTAAATGCTGGGTTGACCTATTCTC 1218 1252 TTCTGATGATATTGAACAACAAGCTGACAATATGATCACTGAGATGTTAC 1301 **|||||||*|*|*||**|*****||**|***|*****|**||**|**|* 1219 AACTGATGACACTAAAAGATTGTATGTTACAGTTGGACCCAAGTAGCAAA 1268 1302 AGAAGGAGT-ATATGGAGAGGCAGGG--GAAGACACCATTGGGTCTAGTT 1348 |*|*|||***||||*|||*||||||***||||||*|||*|||***|*|** 1269 ACATGGATAGATATTGAG-GGCAGGCCTGAAGAC-CCAGTGGAGATTG-- 1314 1349 GACCTCTTTGTGTTCAGCACAAGTTTCTATCTTATTAGCATCTTCCTTCA 1398 *****||||||*||||*|*||||***||*|**|**|**|||***|*||** 1315 -----CTTTGT-TTCAAC-CAAG---CTCTGGTTGTTACATACACTTTTT 1354 1399 CCTAGTCAAAATACCAACTCATAGGCATATTGTAGGCAAGTCGTGTCCCA 1448 **|||**||**|||**||*|*||*|||*|||*****|||***|**|*|*| 1355 --TAGAGAACCTACTGAC-CTTAAGCA-ATT-----CAAACAGGATGCTA 1395 1449 AAC-CTCACA--GATTGAATCATATGGGCATTTGTTCCTGTGGACTCT-- 1493 |***||||||**|**|**||**||**|***|||*||||*****||*|*** 1396 AGTACTCACATGGGATAGATGTTACAGATCTTTTTTCCACACAACCCGGG 1445 1494 ---ACAAACAGCCTGGT-GTGCCTGTGAAATGGAAGA-GATGAGACCCTT 1538 ***||||******|**|*|*|*|**|*****|*||*|*|*||****|||* 1446 CTGACAAGTGCTGTCATAGAGGCACTTCCCCGCAATATGGTGTTGACCT- 1494 1539 GTCAGGGCCCCCGTGAC--CCACCGCCTATTGGCGGTGGGTCACGGGGGC 1586 |*|||||**|***||||**|*|****||*||||*|*****||*|**|||* 1495 GCCAGGGGTCAGATGACATCAAAAAGCTGTTGGAG-----TCTCAAGGGA 1539 1587 GTCCATTTACAGAACGACTCTAGGTGTCGATGTTCTGAACACCATATCTC 1636 |***|***|***||****|**|**|*||**||**|***|*|*||*||*|| 1540 GAAGAGACATCAAATTGATTGATATTTCTTTGAGC---AAAGCAGAT-TC 1585 1637 TGGGCAGCACTGCTCTCAAAACCGATGTGTTCAGTCC-TCCTGACACTGC 1685 **||*||******|*|*||||**|*|||||*****|**|*|**|*|||** 1586 AAGGAAG------TTTGAAAAT-GCTGTGTGGGACCAATACAAAGACTTG 1628 1686 TG---CAT-CAAACATGATGCAGTCCATTAGTGCACAGTGAGGGGTT--- 1728 ||***|||*||*||**||*|*||||**|*||***|*|**|||||||**** 1629 TGTCACATGCACACGGGA-GTAGTCGTTGAGAAGAAAAAGAGGGGTGGAA 1677 1729 ATTTCCTCTTTACCGCCTCTTTTCTTCTTTTCAACAACGACACCTGTG-T 1777 |********|*|||*|***||****|*|**|**||**|**||**|*||*| 1678 AAGAGGAAATCACCCCACATTGCGCTTTACTGGACTGCATCATGTTTGAT 1727 1778 GCATGTGGCATAAGTCTTTATACTGGTCCCAGACTGCATTTTCATACTTC 1827 |||**|***|***||**||**|******|*|*||||*|******|||||| 1728 GCAGCTACTACTGGTAGTTTGAACATCACAACACTG-AGGGCAGTACTTC 1776 1828 CTGGAATCAGTTTTACTGAGGTCAATATC-----AATTAGTTTAATGTCT 1872 |**||**||*|**|**|*|||*|*|***|*****||*|*|||***|***| 1777 CCAGAGACA-TGGTCTTCAGGACCAGCACCCCTAAAGTCGTTCTGTAAAT 1825 1873 TTTCTTCCTTGTGATTCAAGGAGTTT--CCTTATGTCATCGGACC--CCT 1918 ***|**||**||||**||**|***||**|**|**||||**||**|**||| 1826 GAACGCCCCCGTGACCCACCGCCATTGGCGGTGGGTCACGGGGGCTCCCT 1875 1919 GACAGGTAATGACCATATTCCGGGGGAGTGCATCA--ATG--------AC 1958 |***||*****|*|*|*||||*******||*|*||**|*|********|| 1876 GTTTGGAGTCTATC-TCTTCCACTTTGTTGGAACACCAGGGTGTTTGTAC 1924 1959 AG--CACTGGT-CAAGCCCGGTTGTG---TAG-CGAAGAGGTCTGTGACA 2001 ||**|||*||**||**|*|***||||***|||*|*|*|*|||*||*|||| 1925 AGTCCACAGGAACATACTCCCATGTGATTTAGTCTATGGGGTTTGGGACA 1974 2002 TCAATCCC-----ATGTGAGTACTT--AGCATCCTGCTTGAACTGCTTTA 2044 ****|*||*****|||||***|**|**||*****|***|*||*|||***| 1975 GGGTTTCCCAACGATGTGTCGATGTGTAGGGATTTTAATTAAATGCAAGA 2024 2045 AATCAGTAGGTTCACGGAAGAAGTGTATGTAGCAGCCTGAACTTGGTTGA 2094 ||****|**|*|||***||*|||**|*||****||**||||**||***** 2025 AAATGCT--GATCAGATAA-AAGCTTGTGCTAAAGA-TGAAAATGTCCAC 2070 2095 TAG-----AGGGCAATTTCCACTGGATCTTCAGGTCTTCCTTCAATGTCC 2139 |||*****|||||**|||||**||**|*|**|*||*|||*|||*****|* 2071 TAGTCCCAAGGGCGTTTTCCCTTGTCTTTCAATGTATTCTTTCTGAAGC- 2119 2140 ATCCAGGTCTTAGCATTTGGGTCAAGTTGCAGCATTGCATCCTTGAGGGT 2189 |||***||**|**|||*|||*||***||||*|***|***||*|**||*|* 2120 ATCTCTGTGAT--CATATGG-TCGGCTTGCTGTTCTATGTCATC-AGAGA 2165 2190 CATCAGCTGAGAATAGGTAAG-CCCAGCGG---TAAACCCTGCCGACTGC 2235 **|**|*|*****|||*||*|*||||**||***|||*||****|****|* 2166 ACTGGGTTTCATTTAGATATGACCCATTGGATATAAGCCAACACTTTGGT 2215 2236 AGGGATTTACT---GGAATTGTTGCTGTCAGCTTTCTGTGGCTTCCCATC 2282 ||*|||*|*||***|**|*|**|****|*|***|*|*****|||*|**|* 2216 AGTGATGTTCTCCCGCTACTAGTATGATTAAGGTACCAATACTTGC--TG 2263 2283 TGATTCCAGATC--AACGACAGTGTTTTCCCA-----GGCCCTTCCTGTT 2325 |*|||*|||*****||*|*|**||*|*||*|******||**||||*||*| 2264 TAATTGCAGTAGGGAATGCCCATGATGTCTCTTAAATGGTTCTTCATGAT 2313 2326 --ATTGAGG-TTCTTGATGCAATATATGGCC--ATCCATCTCCTGACAAA 2370 **|||||***||**|*|*|**||**|*|||***||**||****|||*|*| 2314 TAATTGATCATTGATTAAGGCATTCACGGCTTTATTTATTAATTGA-ATA 2362 2371 CAAATCTTGTAGAGTATGTTTTCA---TAAGGATTCCTTTCACCAGGGGT 2417 |**||||*|**|**|**|**||||***||*|||||*|||*|*****|*** 2363 CTCATCTGG--GCCTCAGCCTTCAACCTACGGATTGCTTGCTTGTTGAAA 2410 2418 GTCTGAAATG--AACATTCCAAGAGCCTTCTTGAC---CTTTAAAATGGA 2462 ******|||***|*|||**||**|**||*||***|***|||***|*||*| 2411 TCAAACAATCTCAGCATGTCACAAAACTCCTCATCATGCTTCTCATTGCA 2460 2463 TTTGAGGATACCATCCATTGTCTGAGGTGACACCTTGATTGTCTCCAACA 2512 |||****|*|*|*|**|||**|**|****||||*||||*|*|||*|**|| 2461 TTTTGCCACAGC-TGTATTCCCAAA----ACAC-TTGAGT-TCTGCTTCA 2503 2513 TATTGCCACCATCCAGC-ATGCAAG---CTCCTGCCTTCACAGCTGCACC 2558 **|*||**|||*|**|**|**|||****|*||||***|**||**|||*|* 2504 ATTAGCATCCACCTGGTTAAACAATAACCACCTGGTGTTTCAT-TGCCCT 2552 2559 CA--AGCTAAAATTATA-ACCTGAGATATTCAAAGAGCTT-----TTCTT 2600 ||**|*||*|*|*|*|**|**|||******|*||||||*|*****||*|* 2553 CAGAATCTGACAATGTCCAGGTGAAGGTCCCCAAGAGCCTCCTACTTATA 2602 2601 GGTGTCAATCATATTTAGGATGGGATGACTTTGAGTCAGCCTGTCTAAG- 2649 **|*|***||*|*|******||**|**|*****||**|*||**|***||* 2603 TATATATCTCTTGTCCTTTGTGACAAAAGGCCAAGGTACCCGATAGGAGA 2652 2650 ---TCTGAAGTGTTGGGATACTT--TGCTGTGTAGATCAAACCCAAATCT 2694 ***|||**||**||||*|****|**|*|**|||*|***********|||* 2653 CGGTCTTGAGAATTGGCAGTGGTCCTCCCATGTTGTATTTTGAATTATCA 2702 2695 GTCAATGCTTGTACTGCATCATTCAAGTCAACCTGCCCCTGTTTTGTCAG 2744 |**|*||*|*|*****|||*||*||*|||****|**||||*|**||**** 2703 GGTACTGGTAGCTGGTCATTATACA-GTCCCAGTTTCCCTTTCCTGAGTC 2751 2745 ACATGCCA-GTGTCAGACTTGGCATGGTCCCGAACTGATTACTGA--GCA 2791 **||||*|*||*||***|****||*|***||***||*||*|*||***||| 2752 TAATGCAATGTATCTTCCACCCCAGG---CCATTCTCATAAATGTTTGCA 2798 2792 ACTCTGCATTTTTCACA-TCCCAAACTCTCACCACTCCATCTCTCCCA-- 2838 ||*||*|*||****||**|||||*|*|*|**|**|**||||*|***||** 2799 ACACTCCGTTGGCAACTGTCCCACAGTGTT-CGGCCGCATCCCCAGCATA 2847 2839 -GCCCGAGCCCC-TTGATTACCACCACTCATT--CCTATCATATTCAGGA 2884 *|***|||*****|||**|**|||*|||*|||**||***|||****|**| 2848 GGAATGAGAGAGGTTGTATTGCAC-ACTGATTTTCCCTCCATTGAAATCA 2896 2885 GAGCTCTTCTTTGGTCAAGTTGCTGTGAGCTTAGGTTGCCCATATAGACA 2934 *|*|||*|***|**|||***||*|***||*||*|**||***|*||*||** 2897 CAACTCATGGCT--TCATACTGATTGAAGTTTGGAATGGATAGATGGAAT 2944 2935 CCTGCACTTAATGGCCTTTCTGTTCTGATCACCT---TTGACTTTAACTT 2981 **||*|**|*|||**|*|*******||||||******||***|||***** 2945 GTTG-AGATGATGCTCATGAGAGCATGATCATAAAGATTCTTTTTGTGAG 2993 2982 CTCTAGATCAGCGGCTAA------GATTAATAAGTCATCTGAG-GTTAGA 3024 |****|||*||**||*||******||||*||||**|***||***||||*| 2994 CATCGGATAAGTTGCAAAATTTGTGATTTATAATGCTGGTGTTAGTTAAA 3043 3025 GTCC--------CAACTCTCAGTAT--ACTCTTTTGTTGAGTTGATTTTA 3064 |||*********|*|*|||||*|****||||||*|||***|*|||*|*** 3044 GTCAATTCTAATCCAGTCTCATTGCCCACTCTTATGTAATGATGACTGCT 3093 3065 ATTCAACAAGATTGTTGACCGCTTGAT-----TTAGGTCCCTCAACCGT- 3108 *|||*****|**||*|*|**||*||*|*****|||||**|**||****|* 3094 GTTCTTGGTGCATGATAAGGGCATGGTCATGTTTAGGGTCTCCATATTTA 3143 3109 -TTCAAATCATTGTCATCCCTTCTCTCCTTGCGCATCAACCGTT---GAA 3154 *|||*||***|||*||*|*|*|*||*||*|*****|*||**|||***||| 3144 ATTCTAAGGTTTG-CAGCTCATATCCCCCT-----TTAAGGGTTAGGGAA 3187 3155 CATTACTGACTTCGGAGAAGTCAAGTCCATGTAAAAGAGCCTGGGCATCT 3204 ||**|||**|**|**|**|*|*||****|*|**||**|**|*****|||* 3188 CAAGACTTGCCACACAAGAATAAA----AAGGCAACCAATCCAATAATC- 3232 3205 TTCACCACCTGTAGTTTGATGTTGGAGCAGTAACCAGATAATTCCCTCCT 3254 ****||||*|||||***||||||**|**||***|***|**|||*||**** 3233 ----CCACATGTAGC--GATGTTATACAAGCC-CTTCAAGATTGCCAATA 3275 3255 CAAAGATTGTGTCCACAAAAAGGATTTT-ATTTCCTTT-------GAGGC 3296 *|*|*|**|*****|**|*||*|*|**|*|*|||||*|*******|*||| 3276 GAGAAAGCGCAATTAGCACAATGTTCATGACTTCCTCTATTACATGTGGC 3325 3297 ACTCATCGCCAGATTGTTGTGTTGTATGCACACAACAAAGAACTGAGACT 3346 |||**|*|**|||*|||**|**|*|***|****|***|*|||*|****|| 3326 ACTTCTTGAAAGAATGTAATAATCTGCCCCATGATTTAGGAATTC---CT 3372 3347 ATCTGCCAAAATGACAAAAGCAAAGCGCAATCCAATA-GCCTAGGATCCA 3395 |*||***|***|||*******||||||||||||*|*|*|||||||||||| 3373 AACTAGTAG--TGAATCTCTAAAAGCGCAATCCTAAATGCCTAGGATCCA 3420 3396 CTGTGCG 3402 ||||||| 3421 CTGTGCG 3427