NC_006573 AY628207 1 GCGCACCGGGGATCCTAGGCATTTTTGGTTGCGCAATTC---AAGTGTCC 47 *|||||*|*|||||||||||**||**|*||||||**|*****||*|||*| 1 -CGCACAGTGGATCCTAGGCGATTG-GATTGCGCTTTGTGATAATTGTGC 48 48 TATTTAAAATGGGACAAATAG-------TGACATTCTTCCAGGAAGTGCC 90 ****||||*||***|**|*||*******||*||*||**||***|*||**| 49 AGAGTAAAGTGACTCTTACAGAACCACTTGTCACTCCACCTTTAGGTTGC 98 91 TCATGTAATAGAAGAGGTGATGAAC---ATTGTTCTCATTGCACTG-TCT 136 ||*****|*|**||***|||**|||***|**|***|||***||*|**|*| 99 TCCAAGCACATCAGCAATGAGCAACTCCAAGGAAATCAAATCATTCCTTT 148 137 GTACTAGCAGTGCTGA--AAGGTCTGTACAATTTTGCAACGTGTGGCCTT 184 |*|||**||||*||*|**||||***|*||*||*|*|**||*|||****** 149 GGACT--CAGTCCTTACGAAGG---GAACTATCTGGTTAC-TGTTCTAAC 192 185 GTTGGTTTGGTCACTTTCCTCCTGTTGTGTGGTAGGTCTTGCACAACCAG 234 *|****|||**||**||******|*||****|****||*||||***||** 193 ATAAAGTTG--CAAGTTGTCAAAGATGCTCAGGCTCTCCTGCATGGCCTT 240 235 TCTTTATAAAGGGGTTTATGAGCTTCAGACTCTGGAACTAAACATGGAGA 284 ***||*|***|*|||*****|**|*||||**|||***|**||***|*||| 241 GACTTTTCT-GAGGTCAGCAATGTGCAGAGGCTGATGCGCAAGCAGAAGA 289 285 CACTCAATAT-GACCATGCCTCTCTCCTGCACAAAGAACAA-CAGTCATC 332 *|****||***||||********||***|*|*****|*|||*|*||||*| 290 GAGATGATGCAGACCTAAAGCGACTGAGGGATCTGAATCAAGCTGTCAAC 339 333 A---TTATATAATGGTGGGCAATGAGACAGGACTAGAACTGACCT-TGAC 378 |***||*|**||**|**|*|||****||||*|**|***||*|****|*** 340 AATCTTGTTGAACTGAAGTCAACTCAACAGAAGAATGTCTTAAGGGTCGG 389 379 CAACACGAGCATTATTAATC--ACAAATTTTGCAATCTGTCTG-ATGCCC 425 ||*|**|||******|*|||**|*||*|||*|||******|||*|****| 390 CACCTTGAGTTCAGATGATCTAATAACTTTGGCAGCGGACCTGGAAAAAC 439 426 ACAAAAAGAACCTCTATGACCACGCTCTTATGAGCATAATCTCAACTTTC 475 *|||****||**||*||*|**||******|*|****|*|*||||**|*|* 440 TCAAGTCCAAAGTC-ATAAGGACAGAA--AGGCCTTTGAGCTCAGGTGTT 486 476 CACTTGTCCATCCCCAACTTCAATCAGTATGAGGCAATGAGCTGCGATTT 525 *||*||***|*****|*||***|*|||**|||***||*|||**||**|*| 487 TACATGGGGAATTTAAGCTCACAACAGCTTGATCAAAGGAGG-GCTCTCT 535 526 TAATGGGGGAAAGATTAGTGTG-CAGTACAACCTGA--GTCACAGCTATG 572 |*|*****|*|*||||*|**||*|||****||||*|**|**|*||****| 536 TGA-----GCATGATTGGGATGTCAGGTGGACCTCAAGGAAATAGGACAG 580 573 CTGGGGATGCAGCCAACCAT-TGTGGTACTGTTGCAAATGGTGTGTTACA 621 *||||||||**|*|**|****|*|||*||*||***|||||**|**||||* 581 GTGGGGATGGTGTCGTCAGGGTTTGGGAC-GTAAAAAATGCAGAATTACT 629 622 GACTTTTATGAGGATGGCTTGGGGTGGGAGCT-ACATTGCTCTTGACTCA 670 *|*|***|**|***|||******|******||*||*|||**|*||*|||| 630 CAATA--ACCAATTTGGAACCATGCCAAGCCTCACCTTGG-CGTGCCTCA 676 671 GG---CCGTGGCAACTGGGACTGTATTATGACTAGTTATCAATATCTGAT 717 *****|***|||||*|||**||**||*|||****|**|*|**||*|*||| 677 CCAAACAAGGGCAAGTGGACCTCAATGATGCTGTGCAAGCTTTAACAGAT 726 718 AATCCAAAATACAACCTGGGAAGATCACTGCCAATTCTCGAGACCATCTC 767 *************|**|**||****|||*||*||*|******|||****| 727 TT-----------AGGTTTGATTTACACAGCAAAGT------ACCCGAAC 759 768 CCATCGGTTATCTCGGGCTCCTCTCACAAAGGACTAGAGATATTTATATT 817 *|*||*|**||||*|***|*|||*|*||*||*************||||*| 760 TCTTCAG--ATCTAGACATGCTCACTCAGAGTCACCC-------TATACT 800 818 AGTAGAAGATTGCTAGGCACATTCACATGGACACTGTCAGATTCTGAAGG 867 ||*****||*||*|*|*||||***|***|**|*|||**|***|||*|*|* 801 AG-----GAATGGTTGACACAAAAAAGAGTTCCCTG--AACATCTCAGGT 843 868 TGAAGACACAC-CAGGGGGATATTGTCTGACCAGGTGGATGC-TAATTGA 915 |**|****||**|*|||||*|***||***|*|*||||**|||*|**|||| 844 TACAACTTCAGTCTGGGGGCTGCAGTTAAAGCTGGTGCTTGCATGCTTGA 893 916 GGCTGAACTAAAATGCTTCGGGAACAC---AGCTGTGGCAAAATGTAATG 962 *|**|****||*|||*|**||*||||****|**|||**|*|*|***|||| 894 TGGGGGC--AACATGTT--GGAAACAATAAAAGTGTCACCACAAACAATG 939 963 AGAAGCATGATGAGGAATTTTGTGACATGCTGAGGCTGTTTGACT-TCAA 1011 ****|*||**|||****|*||*|||****|**|*|*|***||****|*** 940 GACGGTATTTTGAAATCTATTCTGAAGGTCAAAAGATCACTGGGAATGTT 989 1012 CAAACAAGCCATTCAAAGGTTGAAAGCTGAAGCACAAATGAGCATTCAGT 1061 ||*****|*||*||***|**||||||***||*|*||*|||||*|*****| 990 CATTTCTGACACTCCTGG--TGAAAG---AAACCCATATGAGAACATCCT 1034 1062 TGATCAACAAAGCAGTAAATGCTTTGATAAATGACCAACTTATA-ATGAA 1110 **||*|*****||**|**|*|***|||****||*||***|**|**||*|| 1035 CTATAAGATCTGCCTTTCAGG---TGAAGGTTGGCCGTATATTGCATCAA 1081 1111 GAAC--CATCTAC-GGGACATCATGGGAATTCCATACTGTAATTACAGCA 1157 ||||**||**|||*||||*|*|*||||||**|***|||*|**||****** 1082 GAACATCAATTACTGGGAGAGCTTGGGAAAAC---ACTCTTGTT------ 1122 1158 AGTATTGGTACCTCAACCACACAACTACTGGGAGAACAT--CACTGCC-C 1204 *|**||||*|*||*|*|*|||*|||*||*|**|**|*||**|*|||***| 1123 -GATTTGGAATCTGA-CAACA-AACCACCGAAACTAAATAGCGCTGGTTC 1169 1205 AAATGTTGGCTTGTATCAAATGGTTC---ATACTTGAACGAGACCCACTT 1251 *|||****|||||*|*******|*||***||*||*|***||******||* 1170 CAATAAAAGCTTGCAGGCTGCAGGTCTAAATGCTGGGTTGACCTATTCTC 1219 1252 TTCTGATGATATTGAACAACAAGCTGACAATATGATCACTGAGATGTTAC 1301 **|||||||*|*|*||**|*****||**|***|*****|**||**|**|* 1220 AACTGATGACACTAAAAGATTGTATGTTACAGTTGGACCCAAGTAGCAAA 1269 1302 AGAAGGAGT-ATATGGAGAGGCAGGG--GAAGACACCATTGGGTCTAGTT 1348 |*|*|||***||||*|||*||||||***||||||*|||*|||***|*|** 1270 ACATGGATAGATATTGAG-GGCAGGCCTGAAGAC-CCAGTGGAGATTG-- 1315 1349 GACCTCTTTGTGTTCAGCACAAGTTTCTATCTTATTAGCATCTTCCTTCA 1398 *****||||||*||||*|*||||***||*|**|**|**|||***|*||** 1316 -----CTTTGT-TTCAAC-CAAG---CTCTGGTTGTTACATACACTTTTT 1355 1399 CCTAGTCAAAATACCAACTCATAGGCATATTGTAGGCAAGTCGTGTCCCA 1448 **|||**||**|||**||*|*||*|||*|||*****|||***|**|*|*| 1356 --TAGAGAACCTACTGAC-CTTAAGCA-ATT-----CAAACAGGATGCTA 1396 1449 AAC-CTCACA--GATTGAATCATATGGGCATTTGTTCCTGTGGACTCT-- 1493 |***||||||**|**|**||**||**|***|||*||||*****||*|*** 1397 AGTACTCACATGGGATAGATGTTACAGATCTTTTTTCCACACAACCCGGG 1446 1494 ---ACAAACAGCCTGGT-GTGCCTGTGAAATGGAAGA-GATGAGACCCTT 1538 ***||||******|**|*|*|*|**|*****|*||*|*|*||****|||* 1447 CTGACAAGTGCTGTCATAGAGGCACTTCCCCGCAATATGGTGTTGACCT- 1495 1539 GTCAGGGCCCCCGTGAC--CCACCGCCTATTGGCGGTGGGTCACGGGGGC 1586 |*|||||**|***||||**|*|****||*||||*|*****||*|**|||* 1496 GCCAGGGGTCAGATGACATCAAAAAGCTGTTGGAG-----TCTCAAGGGA 1540 1587 GTCCATTTACAGAACGACTCTAGGTGTCGATGTTCTGAACACCATATCTC 1636 |***|***|***||****|**|**|*||**||**|***|*|*||*||*|| 1541 GAAGAGACATCAAATTGATTGATATTTCTTTGAGC---AAAGCAGAT-TC 1586 1637 TGGGCAGCACTGCTCTCAAAACCGATGTGTTCAGTCC-TCCTGACACTGC 1685 **||*||******|*|*||||**|*|||||*****|**|*|**|*|||** 1587 AAGGAAG------TTTGAAAAT-GCTGTGTGGGACCAATACAAAGACTTG 1629 1686 TG---CAT-CAAACATGATGCAGTCCATTAGTGCACAGTGAGGGGTT--- 1728 ||***|||*||*||**||*|*||||**|*||***|*|**|||||||**** 1630 TGTCACATGCACACGGGA-GTAGTCGTTGAGAAGAAAAAGAGGGGTGGAA 1678 1729 ATTTCCTCTTTACCGCCTCTTTTCTTCTTTTCAACAACGACACCTGTG-T 1777 |********|*|||*|***||****|*|**|**||**|**||**|*||*| 1679 AAGAGGAAATCACCCCACATTGCGCTTTACTGGACTGCATCATGTTTGAT 1728 1778 GCATGTGGCATAAGTCTTTATACTGGTCCCAGACTGCATTTTCATACTTC 1827 |||**|***|***||**||**|******|*|*||||*|******|||||| 1729 GCAGCTACTACTGGTAGTTTGAACATCACAACACTG-AGGGCAGTACTTC 1777 1828 CTGGAATCAGTTTTACTGAGGTCAATATC-----AATTAGTTTAATGTCT 1872 |**||**||*|**|**|*|||*|*|***|*****||*|*|||***|***| 1778 CCAGAGACA-TGGTCTTCAGGACCAGCACCCCTAAAGTCGTTCTGTAAAT 1826 1873 TTTCTTCCTTGTGATTCAAGGAGTTT--CCTTATGTCATCGGACC--CCT 1918 ***|**||**||||**||**|***||**|**|**||||**||**|**||| 1827 GAACGCCCCCGTGACCCACCGCCATTGGCGGTGGGTCACGGGGGCTCCCT 1876 1919 GACAGGTAATGACCATATTCCGGGGGAGTGCATCA--ATG--------AC 1958 |***||*****|*|*|*||||*******||*|*||**|*|********|| 1877 GTTTGGAGTCTATC-TCTTCCACTTTGTTGGAACACCAGGGTGTTTGTAC 1925 1959 AG--CACTGGT-CAAGCCCGGTTGTG---TAG-CGAAGAGGTCTGTGACA 2001 ||**|||*||**||**|*|***||||***|||*|*|*|*|||*||*|||| 1926 AGTCCACAGGAACATACTCCCATGTGATTTAGTCTATGGGGTTTGGGACA 1975 2002 TCAATCCC-----ATGTGAGTACTT--AGCATCCTGCTTGAACTGCTTTA 2044 ****|*||*****|||||***|**|**||*****|***|*||*|||***| 1976 GGGTTTCCCAACGATGTGTCGATGTGTAGGGATTTTAATTAAATGCAAGA 2025 2045 AATCAGTAGGTTCACGGAAGAAGTGTATGTAGCAGCCTGAACTTGGTTGA 2094 ||****|**|*|||***||*|||**|*||****||**||||**||***** 2026 AAATGCT--GATCAGATAA-AAGCTTGTGCTAAAGA-TGAAAATGTCCAC 2071 2095 TAG-----AGGGCAATTTCCACTGGATCTTCAGGTCTTCCTTCAATGTCC 2139 |||*****|||||**|||||**||**|*|**|*||*|||*|||*****|* 2072 TAGTCCCAAGGGCGTTTTCCCTTGTCTTTCAATGTATTCTTTCTGAAGC- 2120 2140 ATCCAGGTCTTAGCATTTGGGTCAAGTTGCAGCATTGCATCCTTGAGGGT 2189 |||***||**|***|||***|*|**|*||****||**||||****||*|* 2121 ATCTCTGTGATCATATTGTCGGCTTGCTGTTCTATGTCATC----AGAGA 2166 2190 CATCAGCTGAGAATAGGTAAG-CCCAGCGG---TAAACCCTGCCGACTGC 2235 **|**|*|*****|||*||*|*||||**||***|||*||****|****|* 2167 ACTGGGTTTCATTTAGATATGACCCATTGGATATAAGCCAACACTTTGGT 2216 2236 AGGGATTTACT---GGAATTGTTGCTGTCAGCTTTCTGTGGCTTCCCATC 2282 ||*|||*|*||***|**|*|**|****|*|***|*|*****|||*|**|* 2217 AGTGATGTTCTCCCGCTACTAGTATGATTAAGGTACCAATACTTGC--TG 2264 2283 TGATTCCAGATC--AACGACAGTGTTTTCCCA-----GGCCCTTCCTGTT 2325 |*|||*|||*****||*|*|**||*|*||*|******||**||||*||*| 2265 TAATTGCAGTAGGGAATGCCCATGATGTCTCTTAAATGGTTCTTCATGAT 2314 2326 --ATTGAGG-TTCTTGATGCAATATATGGCC--ATCCATCTCCTGACAAA 2370 **|||||***||**|*|*|**||**|*|||***||**||****|||*|*| 2315 TAATTGATCATTGATTAAGGCATTCACGGCTTTATTTATTAATTGA-ATA 2363 2371 CAAATCTTGTAGAGTATGTTTTCA---TAAGGATTCCTTTCACCAGGGGT 2417 |**||||*|**|**|**|**||||***||*|||||*|||*|*****|*** 2364 CTCATCTGG--GCCTCAGCCTTCAACCTACGGATTGCTTGCTTGTTGAAA 2411 2418 GTCTGAAATG--AACATTCCAAGAGCCTTCTTGAC---CTTTAAAATGGA 2462 ******|||***|*|||**||**|**||*||***|***|||***|*||*| 2412 TCAAACAATCTCAGCATGTCACAAAACTCCTCATCATGCTTCTCATTGCA 2461 2463 TTTGAGGATACCATCCATTGTCTGAGGTGACACCTTGATTGTCTCCAACA 2512 |||****|*|*|*|**|||**|**|****||||*||||*|*|||*|**|| 2462 TTTTGCCACAGC-TGTATTCCCAAA----ACAC-TTGAGT-TCTGCTTCA 2504 2513 TATTGCCACCATCCAGC-ATGCAAG---CTCCTGCCTTCACAGCTGCACC 2558 **|*||**|||*|**|**|**|||****|*||||***|**||**|||*|* 2505 ATTAGCATCCACCTGGTTAAACAATAACCACCTGGTGTTTCAT-TGCCCT 2553 2559 CA--AGCTAAAATTATA-ACCTGAGATATTCAAAGAGCTT-----TTCTT 2600 ||**|*||*|*|*|*|**|**|||******|*||||||*|*****||*|* 2554 CAGAATCTGACAATGTCCAGGTGAAGGTCCCCAAGAGCCTCCTACTTATA 2603 2601 GGTGTCAATCATATTTAGGATGGGATGACTTTGAGTCAGCCTGTCTAAG- 2649 **|*|***||*|*|******||**|**|*****||**|*||**|***||* 2604 TATATATCTCTTGTCCTTTGTGACAAAAGGCCAAGGTACCCGATAGGAGA 2653 2650 ---TCTGAAGTGTTGGGATACTT--TGCTGTGTAGATCAAACCCAAATCT 2694 ***|||**||**||||*|****|**|*|**|||*|***********|||* 2654 CGGTCTTGAGAATTGGCAGTGGTCCTCCCATGTTGTATTTTGAATTATCA 2703 2695 GTCAATGCTTGTACTGCATCATTCAAGTCAACCTGCCCCTGTTTTGTCAG 2744 |**|*||*|*|*****|||*||*||*|||****|**||||*|**||**** 2704 GGTACTGGTAGCTGGTCATTATACA-GTCCCAGTTTCCCTTTCCTGAGTC 2752 2745 ACATGCCA-GTGTCAGACTTGGCATGGTCCCGAACTGATTACTGA--GCA 2791 **||||*|*||*||***|****||*|***||***||*||*|*||***||| 2753 TAATGCAATGTATCTTCCACCCCAGG---CCATTCTCATAAATGTTTGCA 2799 2792 ACTCTGCATTTTTCACA-TCCCAAACTCTCACCACTCCATCTCTCCCA-- 2838 ||*||*|*||****||**|||||*|*|*|**|**|**||||*|***||** 2800 ACACTCCGTTGGCAACTGTCCCACAGTGTT-CGGCCGCATCCCCAGCATA 2848 2839 -GCCCGAGCCCC-TTGATTACCACCACTCATT--CCTATCATATTCAGGA 2884 *|***|||*****|||**|**|||*|||*|||**||***|||****|**| 2849 GGAATGAGAGAGGTTGTATTGCAC-ACTGATTTTCCCTCCATTGAAATCA 2897 2885 GAGCTCTTCTTTGGTCAAGTTGCTGTGAGCTTAGGTTGCCCATATAGACA 2934 *|*|||*|***|**|||***||*|***||*||*|**||***|*||*||** 2898 CAACTCATGGCT--TCATACTGATTGAAGTTTGGAATGGATAGATGGAAT 2945 2935 CCTGCACTTAATGGCCTTTCTGTTCTGATCACCT---TTGACTTTAACTT 2981 **||*|**|*|||**|*|*******||||||******||***|||***** 2946 GTTG-AGATGATGCTCATGAGAGCATGATCATAAAGATTCTTTTTGTGAG 2994 2982 CTCTAGATCAGCGGCTAA------GATTAATAAGTCATCTGAG-GTTAGA 3024 |****|||*||**||*||******||||*||||**|***||***||||*| 2995 CATCGGATAAGTTGCAAAATTTGTGATTTATAATGCTGGTGTTAGTTAAA 3044 3025 GTCC--------CAACTCTCAGTAT--ACTCTTTTGTTGAGTTGATTTTA 3064 |||*********|*|*|||||*|****||||||*|||***|*|||*|*** 3045 GTCAATTCTAATCCAGTCTCATTGCCCACTCTTATGTAATGATGACTGCT 3094 3065 ATTCAACAAGATTGTTGACCGCTTGAT-----TTAGGTCCCTCAACCGT- 3108 *|||*****|**||*|*|**||*||*|*****|||||**|**||****|* 3095 GTTCTTGGTGCATGATAAGGGCATGGTCATGTTTAGGGTCTCCATATTTA 3144 3109 -TTCAAATCATTGTCATCCCTTCTCTCCTTGCGCATCAACCGTT---GAA 3154 *|||*||***|||*||*|*|*|*||*||*|*****|*||**|||***||| 3145 ATTCTAAGGTTTG-CAGCTCATATCCCCCT-----TTAAGGGTTAGGGAA 3188 3155 CATTACTGACTTCGGAGAAGTCAAGTCCATGTAAAAGAGCCTGGGCATCT 3204 ||**|||**|**|**|**|*|*||****|*|**||**|**|*****|||* 3189 CAAGACTTGCCACACAAGAATAAA----AAGGCAACCAATCCAATAATC- 3233 3205 TTCACCACCTGTAGTTTGATGTTGGAGCAGTAACCAGATAATTCCCTCCT 3254 ****||||*|||||***||||||**|**||***|***|**|||*||**** 3234 ----CCACATGTAGC--GATGTTATACAAGCC-CTTCAAGATTGCCAATA 3276 3255 CAAAGATTGTGTCCACAAAAAGGATTTT-ATTTCCTTT-------GAGGC 3296 *|*|*|**|*****|**|*||*|*|**|*|*|||||*|*******|*||| 3277 GAGAAAGCGCAATTAGCACAATGTTCATGACTTCCTCTATTACATGTGGC 3326 3297 ACTCATCGCCAGATTGTTGTGTTGTATGCACACAACAAAGAACTGAGACT 3346 |||**|*|**|||*|||**|**|*|***|****|***|*|||*|****|| 3327 ACTTCTTGAAAGAATGTAATAATCTGCCCCATGATTTAGGAATTC---CT 3373 3347 ATCTGCCAAAATGACAAAAGCAAAGCGCAATCCAATA-GCCTAGGATCCA 3395 |*||***|***|||*******||||||||||||*|*|*|||||||||||| 3374 AACTAGTAG--TGAATCTCTAAAAGCGCAATCCTAAATGCCTAGGATCCA 3421 3396 CTGTGCG 3402 ||||||| 3422 CTGTGCG 3428