NC_006573 AY628205 1 GCGCACCGGGGATCCTAGGCATTTTTGGTTGCGCAATTCAAGTGTCCTAT 50 *|||||*|*|||||||||||*|*||*|*||||||**||****|||*|*|* 1 -CGCACAGTGGATCCTAGGC-TATTGGATTGCGC--TT----TGTACCAA 42 51 TTAAAATGGGACA-AATAGTGACATTCTTCCAGGAAGTGCCTCATGTAAT 99 |||***|*|*|*|*|||***||||*|||*|*|***|*|*|**||****|* 43 TTACTTTAGCAGATAATTTCGACACTCTGCTA---AATACAACACACCAA 89 100 AGAAGAGGTGATGAACATTGTTCTCATTGCACTGTCTGTACTAGCAGTGC 149 ***||*|*|||*******|||*||||****|*******||**|*|**|*| 90 TTCAGCGATGAG------TGT-CTCAAAAGAGA-----TAAAATCCTTTC 127 150 TGAAAGGTCTGTACAATTTTGCAACGTGTGGCCTTGTTGGTTTGGT-CAC 198 ||*******||*|||***|**|***|***||**||||*||*||**|*|*| 128 TG-------TGGACACAGTCTCTGAGGAGGGAGTTGTCGGGTTACTGCTC 170 199 TTTCCTCCTGTTGT--GTGGTAGGTCTTGCACAACCAGTCTTTATAAAGG 246 |**|*|****||****|||||******|||*|||*|**||||****|*|| 171 TAACATAAAATTACAAGTGGTTAAAGATGCTCAAGC--TCTTCTGCATGG 218 247 GGTTTA------TGAGCTTCAGACTCTGGAACTAAACATGGAGA--CACT 288 |*||*|******||||*|****|*|*|**|*|*****|||***|**||** 219 GCTTGACTTCTCTGAGGTCAGCAATGTCCAGCGGTTGATGCGCAAGCAAA 268 289 CAAT--ATGACCATGCCTCTCTCCTGCACAAAGAACAACAGTCATCATTA 336 *||***|||||*|*|*||*****|**|**|*|||*|*|*|*****||*|* 269 GAAGGGATGACAACGACTTGAAACGACTGAGAGACCTAAACCAGGCAGTT 318 337 TATAATGGTGGGCAA-TGAGA-CAGGACTAGAACTGACCTTGACCAACAC 384 *|*|||**||***|**|||*|*||***|*|*||**||***|*||**|*|* 319 AACAATCTTGTTGAGCTGAAATCAACTCAACAAAAGAGTGT-ACTGAGAG 367 385 GAGCATTATTAA--TCACA--AATTTTGCAATCTGTCTGATGCCCACAAA 430 **|****|||||**|||*|**|*||*|**|*|*|**|||*||*||***|* 368 TTGGGACATTAACTTCAGATGACTTGTTGATTTTAGCTGCTGACCTAGAG 417 431 AAGA--ACCTCTA---TGACCACGCTCTTATGAGCATA-ATCTCAACTTT 474 |||***|**||*|***||||||*|*****|*|**|||**|*|*|***|*| 418 AAGCTGAAGTCAAAGGTGACCAGGACAGAAAGGCCATTGAGCGCTGGTAT 467 475 CCACTTGTCCATCCCCAACTTCAATCAGTATGAGGCAATGAGCTGCGATT 524 **||*||***|**|**|*||***|*||***|||**|||*||***||**|| 468 TTACATGGGTAATCTAAGCTCACAACAACTTGAT-CAACGACGAGCTCTT 516 525 TT-AATGGGGGAAAGATTAGTGTGCAGTACAACCTGAGTCACAGCTATGC 573 ||*|||**|**|**|||*||||*||*|*|*|*|**|*|*|*|||***||* 517 TTGAATATGATAGGGATGAGTG-GCGGGA-ATCAAGGGGCTCAGAC-TGG 563 574 TGGGGATGCAGCCAACCATTGTGGTACTGTTGCAAATGGTGTGTTACAGA 623 **|*||*|*||**********|*|***|||***|||||**|*|*|*|*** 564 GAGAGACGGAGTGGTGAGGATTTGGGATGTGAAAAATGCAGAGCTGC--- 610 624 CTTTTATGAGGATGGCTTGGGGTGGGAGCTACATTGCTCTTGACTCAGGC 673 **||*|**|**|**|*|||||*******|*|**|||****||*||**|** 611 --TTAACAATCA--GTTTGGGACCATGCCAAGTTTGACACTGGCTT-GTT 655 674 CGTGGCAACTGGGACTGTATTATGACTAGTTATCAATATCTGATAATCCA 723 ******|||*|||||*|**|*||******|*|*|*||*|*||*|*|**|| 656 TAACAAAACAGGGACAGGTTGATT-----TGAACGATGT-TGTTCAGGCA 699 724 AAATACAACCTGGGAA-GATC---ACTGCCAATTCTCGAGAC-CATCTCC 768 *******|||||||***||||***||*||*||*|*||***||*|*||*** 700 TTGACAGACCTGGGCTTGATCTACACAGCAAAGTATCCCAACACCTCAGA 749 769 CATCGGTTATCTCGGGCTCCTCTCACAAAGGACTAGAGAT-ATTTATATT 817 |*|*|*|***||****|****|*|||******|||*|*||*|||*|||** 750 CCTGGATAGACTAACCCAGAGC-CACCCTATTCTAAACATGATTGATACC 798 818 AGTAGAAGATTGCTAGGCACAT-TCACATGGACACTGTCAGATTCTGAAG 866 |**|*|||*|**||**|*|*||*|||**|****|||*||||*||****|| 799 AAGAAAAGCTCTCT--GAATATCTCAGGTTATAACT-TCAGCTT----AG 841 867 GTGAAGACACACCAGGGGGATATTGTCTGACCAGGTGGATGCTAATTG-- 914 |||*||****|**||**|||**|||**||*|**|*|||**||*|**||** 842 GTGCAGCTGTAAAAGCAGGAGCTTGCATG-CTGGATGGTGGCAACATGTT 890 915 AGGCTGAACTAAAATGCTTCGGGAACACAGCTGTGGCAAAATGTAATGAG 964 ||****||**|||*||***|***||***|****|||*|***|*|*|*|** 891 AGAGACAATCAAAGTGTCACCCCAAACAATGGATGGTAT--TCTCAAGTC 938 965 AAGCATGATGAGGAATTTTGTGACATGCTGAGGCTGTTTGACTTCAACAA 1014 *|*|*|*|*|***||****|**|**|**||*||*|||||*|*||||**** 939 CATCTTAAAGGTCAA----GAAAGCTCTTG-GGATGTTT-ATTTCA---- 978 1015 ACAAGCCATTCAAAGGTTGAAAGCTGAAGCACAAATGAGCATTCAGTTGA 1064 ****|*||*||***|**|||*||***||*|*|**|||||*|***|*||*| 979 ----GACACTCCTGG--TGAGAG---AAACCCTTATGAGAACATACTTTA 1019 1065 TCAACAAAGCAGTAAATGCTTTGATAAATGACCA-ACTTATAATGAAGAA 1113 *|||*|***|*||***|*****|||***||*|||*||*|***||*|||*| 1020 -CAAGAT--CTGTTTGTCGGGGGATGGGTGGCCATACATTGCATCAAGGA 1066 1114 C--CATCTACGGGACAT-CATGGGAATTCCATACTGTAATTACAGCAAGT 1160 |**||***||*|||****||||||||**|***|||||**||**|****|* 1067 CTTCAATAACAGGAAGGGCATGGGAAAAC---ACTGTTGTTG-ATTTGGA 1112 1161 ATTGGTACCTCAACCACACAACTACTGGGAG-AACATCACTGCCCAAATG 1209 ||**|******|*|||||*||**|*||||||*||||*|*|***|*||*** 1113 ATCAGGCGAGAAGCCACAAAAA-ATTGGGAGCAACAACTCCAACAAATCC 1161 1210 TTGGCTTGTATCAAATGGTTCA-TACTTGAACGAGACCCACTTTTCTGAT 1258 |||***|*|*****|*||||||*|*||*|****|******||***||*|| 1162 TTGCAGTCTGC---AGGGTTCACTGCTGGGCTCACCTATTCTCAGCTCAT 1208 1259 GATATTGAACAA--CAA-GCTGACAATATGATCACTGAGATGTTACAGAA 1305 ||***|*||**|**|||*||||*||***|||||****|*|||*||****| 1209 GACTCTCAAGGATGCAATGCTG-CAGCTTGATCC---AAATGCTA----A 1250 1306 GGAGTATATGGAGAGGCAGGGGAAGACACCATTGGGTCTAGTTGACCTCT 1355 |***|**|||||*|***||||||****|||****|*||*|||*||**|** 1251 GACCTGGATGGACATTGAGGGGAG---ACCTGAAGATCCAGTAGAAATTG 1297 1356 TTGTGT-TCAGCACAAGTTT---CTATCTTATTAGCATCTTCCTTCACCT 1401 *|*|*|*|||||*||||||****||*|***|||**|*||||||******* 1298 CTCTATATCAGC-CAAGTTCAGGCTGTTACATTCACTTCTTCC------- 1339 1402 AGTCAAAATACCAACTCATAGGCATATTGTAGGCAAGTCGTGTCCCAAAC 1451 *||*||***||**||**|*|***|*|*|**|**||||**|**|****|** 1340 -GTGAACCCACTGACCTAAA---ACAGTTCAAACAAGATGC-TAAGTATT 1384 1452 CTCACAGATTGAATCATATGGGCATTTGTTCCTGTGGACTCTACAAACAG 1501 |*|||*||*|**||**||**|*|*|||*||*|||************|||| 1385 CACACGGAATTGATGTTACAGACCTTT-TTGCTGC-----------ACAG 1422 1502 CCTGGTGTG-CCTGTGAAATGGAAGAGATGAGACCCTTGTCAGGGCCCCC 1550 ||*|||*||*||*|||***||**|*|||*|***|*||***|*|***|*** 1423 CCAGGTTTGACCAGTGC--TGTTATAGAGG---CACTCCCCCGAAACATG 1467 1551 GTGACCCACCGCCTATTGGCGG-TGGGTCACGGGGGCGTCCATTTA-CAG 1598 ||*|****|*|*|****|*|*|*||****|*|***||*|||*|**|*||* 1468 GTCATGACCTGTCAGGGGTCTGATGACATAAGAAAGC-TCCTTGAATCAC 1516 1599 AACGACTCTAGGTGTCGATGTTCTGAACACCATATCTCTGGGCAGCACTG 1648 ||*||****|||*****|*|||**||*|***||**||||**|||**||*| 1517 AAGGAAGGAAGGATATCAAGTT--GATCGATATTGCTCTCAGCAAGACAG 1564 1649 CTCTCAAAACCGATGTG--TTCAGTCC--------TCCTGACACTGCTGC 1688 *|***|*||***|||*|**|*|||||*********|*|**|*|||**||| 1565 ATTCTAGAAAGTATGAGAATGCAGTCTGGGACCAATACAAAGACTTATGC 1614 1689 ATCAAACAT------GATGCAGTCCATTAGTGCACAGTGAGGGGTTATTT 1732 **||**|||******|*||**||**|**||***|****|*|*||**|*** 1615 CACATGCATACAGGTGTTGTTGTTGAAAAGAAGAAGAAGGGTGGCAAAGA 1664 1733 CCTCTTTACCGCCTCTTTTCTTCTTTTCAACAACGACACCTGTG-TGCAT 1781 *****|*|||*|****|*|***||**|**||**|**||**|*||*||||* 1665 GGAAATAACCCCTCACTGTGCCCTAATGGACTGCATCATGTTTGATGCAG 1714 1782 --GTGGCATAAGTCTTTATACTGGTCCCAGACTGCATTTTCATACTTCCT 1829 **|*|*||**||**||*|*||***|***||**|**|******|*||*||| 1715 CAGCGTCAGGAGGATTGA-ACACATT--AGTTTTAAGAGCAGTGCTACCT 1761 1830 GGAATCA--GTTTTACTGAGGTCAATATC--AATTAGTTTAATGTCTTTT 1875 *||***|**||*||****|**||||*|*|**||*|*||****|******* 1762 AGAGATATGGTGTTTAGAACATCAACACCCAAAGTCGTCCTGTAAACGGA 1811 1876 CTTCCTTGTGATTCAAGG---AGTTTCCTTATGTCATCGGACCCCTGACA 1922 |**||**||||**||**|***|****|**|**||||**||**|||||**| 1812 CGCCCCCGTGACCCACCGCCAACAGGCGGTGGGTCACGGGGGCCCTGGTA 1861 1923 GGTAATGACCATATTC--CGGGGGAGTGCATCAA------TGACAGCACT 1964 ||***|*|||*|*|*|**|******||*||*||*******||**|*|||* 1862 GGGTCTTACCTTTTCCATCTCACAGGTACACCAGGTTGTTTGTAAACACC 1911 1965 GGTCAAGCCCGGTTGTGTAGCGAAGAGGTCTGTGACATCAATCCCATGTG 2014 *****|||*********||**|***|**|||*|||**|**|***||||*| 1912 ACAGGAGCATATACCCATATGGTTCAA-TCTATGAGGTTTAGGACATG-G 1959 2015 AGTACTTAGCATCCTGCT-TGAACTGCTTTAAATCAGTAGGTTCACGGAA 2063 **|*|*||**||****||*|||**||*|*|***|*|*|||||**|*|||| 1960 TTTGCCTACAATGTGTCTATGAGTTGGTATTT-TGACTAGGTGGA-GGAA 2007 2064 GAAGTGTAT---GTAGCAGCCTGAACTTGGTTGATAGAGGGCAATTT--- 2107 ||*|**|||***|||**|||*||*|||******|*|||||*|||****** 2008 GATGCTTATAAGGTAAAAGCTTGTACTGAACACAAAGAGGTCAACCAAAC 2057 2108 CCACTGGATCTTCAGGTCTTCCTTCAATGTCCATCCAGGTCTTAGCATTT 2157 |||*|||***||****|**||*|||*||||**||*|***|**||*|||*| 2058 CCAATGGTGTTTTGCCTTGTCTTTCCATGT--ATTCCTTTTGTAACATCT 2105 2158 GGGT---CAAGTTG-CAGCATTGCATCCTTGAGGGTCATCAGCTGAGAAT 2203 **||***|||*|||*||||*||||*****||***|**||||*|*|||||* 2106 CAGTGATCAAATTGTCAGC-TTGC-----TGTTCGATATCATCAGAGAAG 2149 2204 AGGTAAGCCCAGCGGTAA-ACCCTGCCGACTGCAGGGATTTACTGG--AA 2250 *||****|*****||||**|*||****|||***||**|*****|||**|| 2150 TGGGTCTCATTTAGGTATGATCCATTTGACACAAGCCAACACTTGGGCAA 2199 2251 TTGTTGCTGTCAGCTTTCTGTG-GCTTCCCAT--CTGATTCCAGATCAAC 2297 |**|**||*||*|*|**|||||*|*||***||**|*|**||*|****||* 2200 TGATGTCTTTCCGGTGACTGTGTGGTTGAGATACCAGTATCTACTGTAAT 2249 2298 GACAGTGTTT--TCCCAGGCCCTTCCTGTTATTGAGGTTCTTGATGCAAT 2345 **||||*|****||||*******||**|**|*||**||||||*||**|*| 2250 TGCAGTATGGGATCCCCATAATGTCTCGCAAATG--GTTCTTCATT-ATT 2296 2346 ATATGGCCATCCATCTCCTGACAAACAAATCTTGTAGAGTA--TGTTT-- 2391 |**||**|||**|||*****|***||***|*||||*||**|**|||*|** 2297 AGCTGATCATTTATCAGAGCATTTACTGCT-TTGTTGATCAGTTGTATAC 2345 2392 TCATAAG-GATTC--CTTTCA--CCAGGGGTGTCTGAAATGAACAT-TCC 2435 ||||**|*|**||**||||||**|***||*||*||****||***|**||* 2346 TCATCTGAGCCTCGGCTTTCAATCTTTGGATGGCTTGTTTGTTGAAGTCA 2395 2436 AAGAGCCTTCTTGACCTTTAAAATGGATTTGAGGATACCATCCATTGTCT 2485 ||*|||||****|****|*|*||*****||*|**||*|****||||**** 2396 AATAGCCTCA--GCATGTCACAAAACTCTTCATCATGCTTCTCATTACAC 2443 2486 GAGGTGACACCTTGATTGTCTCCAACATATTGC-CACCATCCAGCATGCA 2534 ***|**||**||***|||*|*******|*|**|*||*|*||*|*||*||| 2444 TTTGCCACGGCTGTGTTGCCAAAGCACTTTAACTCAGCTTCAATCA-GCA 2492 2535 AGCTCCTGCCTTCACAGCTGCACCCAAGCTAAAATTATAACCTGAGATAT 2584 **|*||||*****||||*|*|*|*|**|*|*****|*||*|*|*|||*** 2493 TCCACCTGGTCAAACAG-TACCCTCCTGGTGTGTCTTTACCTTCAGAATC 2541 2585 TCAAAGAGCTTTTCTTGGTGT------CAATCATATTTAGGATGGGATGA 2628 |*|*||*|****|*|***|||******|||||*|**|***||||**|**| 2542 TGATAGTGTCCATGTGAATGTTCCCAGCAATC-TCCTGCTGATGTAAATA 2590 2629 -CTTTGAGTCAGCCTGTCTAAGTCTGAAGT-----GTTGGGATACTTTGC 2672 *||*||**||****||*******|**|||******|*|||||*|**|*|| 2591 TCTCTGGTTCTTTGTGAAAGGAGCCCAAGATAGCCGATGGGAGA--TGGC 2638 2673 TGTGTAGATCAAACCCAAATCTGTCAATGCT-TGTACTGCATCATTCAA- 2720 **||*|||*|**||*****|||**|*|*|*|*|||*|||*||*||***|* 2639 CTTG-AGAACTGACAATGGTCTTCCCAGGTTGTGTTCTGAATTATAAGAT 2687 2721 ---GTCAACCTGCCCCTGTTTTGTCAGACATGCCAGTGTCAGACTT---G 2764 ***|**|||**|*|****|***|||**|**|||||****|*||*|****| 2688 ATTGGTAACTAGTCATGATGCAGTCCCAGTTGCCACGACCTGAATCAAGG 2737 2765 GCATGGT--------CCCGAACTGAT--TACTGA------GCAACTCTGC 2798 |||**||********|||*||***||**|**|||******||||**|**| 2738 GCAATGTAACTCCCGCCCCAAGCCATCCTCATGAAGGTCTGCAAAACACC 2787 2799 ATTTTTCACA-TCCCAAACTCTCACCACTCCATCTCTCCCAGCCC-GAGC 2846 ||||**|||**|*|||*|*|*******||*|||||****||***|*|*|* 2788 ATTTGCCACTGTGCCACAATGATTAG-CTGCATCTACAGCATAACTGTGA 2836 2847 CCC---TTGATTACCACCACTCATTCCTATCATATTCAGGAGAGCTCTTC 2893 |*|***|||**|**|||*|||*||******|**|||*|*|**|***||** 2837 CTCAGGTTGTATTGCAC-ACTGATCTTACCCCCATTAAAGTCACAACTCA 2885 2894 TTTGGTCAAGTTGCTGTGAGCTTAGGT-TGCCCATATAGACACCTGCACT 2942 ||***|||***||*|*|||**||||||*|***||*||*||*|**||***| 2886 TTGCTTCATACTGAT-TGAAATTAGGTATAGACAGATGGAAAGTTGAGAT 2934 2943 TAATGGCCTTTCTGTTCTGATCACCTTTGACTTTAACTTCTCTAGATCAG 2992 ||*||**|*|*****|*||*|||***|*||**||**|||*|***|**||* 2935 TA-TGCTCATAAGAGTGTGGTCA---TAGAGATT--CTTTTTGTGGGCAT 2978 2993 CGGCTAAGATTAATAAGTCATCTGAGGTTAGAGTCCCAACTCTCAGTATA 3042 |*|*||***|**|*||*|**|*|||**|||*|*|*|******|****|*| 2979 CAGATAGATTGCAGAACT--TGTGAT-TTATAATACTTGTGTTGGTCAAA 3025 3043 CTCTTTTGTTGAGTTGATTTTAATTCAACAAGATTGTTGACCGCTTGATT 3092 *||**||***|***||**|*|*|||***||**|||*|**|**|*|***|* 3026 GTCAGTTCCAGTCCTG--TCTCATTGCCCACCATTATGTAATGGTGACTG 3073 3093 TAGGTCCCTCAACCGTTTCAAATCATTGTCATCCCTTCTCTCCTTGCGCA 3142 |*|*||**|***|**********|||||||||***|||**|**||*|**| 3074 TTGTTCTTTGTGCAAGAGAGGGGCATTGTCATG--TTCAGTGTTTCC--A 3119 3143 TCAACCGTTGAACATTACTGACTTCGGAGAAGTCAAGTCCATGTAAA-AG 3191 |*****|||*|||***|**|*||***|***|***|***||*||||||*|| 3120 T-----GTTCAACTCCAAGGTCTGAAGCTCATAAACTCCCTTGTAAAGAG 3164 3192 AGCCTGGGCATCTTTCACCACCTGT----AGTTTGATGTTGGAGC-AGTA 3236 *|**||**||******|||||*|******||***|*||****|||*|*|| 3165 TGGTTGAACAAGACCTACCACATAGGAAGAGAAAGGTGACCAAGCCAATA 3214 3237 A--CCAGATAATTC--CCTCCTCAAAGATTGTGTCCACAAAAAGGATTTT 3282 |**|||*||**|*|**|*|**|**||***|*|***||||***||*||*** 3215 AGGCCACATGTTGCAACATTGTACAAACCTTTCAGCACAGCTAGTATGGA 3264 3283 ATTTCCTTTGAGG-CACTCATCGCCAGAT--TGTTGTGTTGTATGCACAC 3329 ***|*|**|*||**||*|**||***|**|**|*|**|*****|*|*||** 3265 CAGTGCGATAAGTACAATGTTCATGACCTCCTCTATTACATGAGGGACTT 3314 3330 AACAAAGAACTGAGACTATCTGCCAAAAT--------GACAAAAGCAAAG 3371 *****|*||*||*||||||*||||**|*|********||*|***|*|**| 3315 CCTGGAAAAATGTGACTATTTGCCCCATTTTAAGGAAGATACTTGAATTG 3364 3372 CGCAATCCAATA-GCCTAGGATCCACTGTGCG 3402 |||||*|*||*|*||||||||||||||||||| 3365 CGCAACCAAAAATGCCTAGGATCCACTGTGCG 3396