NC_003017 AY496445 1 AGTAGGAACGGCACTTGTACGAAGGCCATAGGAAAACCCGATTAATAAAA 50 |************************************************* 1 A------------------------------------------------- 1 51 TGCACTTTTACTCGCTACACGTCTGAAATGTTACCAAACACTGAACTACA 100 ****************************|||||||*|||||**||||||| 2 ----------------------------TGTTACCGAACACAAAACTACA 23 101 CACAACTGAATTCTCTAAAACTCGCAAATTTACACGTCAATCATTTAAGC 150 ||**||***|||||||*||||*|||||||||||||||*|*||*|||||** 24 CAACACAATATTCTCTGAAACCCGCAAATTTACACGTGAGTCGTTTAAAG 73 151 AAATCGAGCAGTTAACTGCAAGTTTAGCAAACGACAGAGTCGCAAGACAT 200 ||||*|||||*|||||*|||||**||||||||||*||||||||*|||||| 74 AAATTGAGCATTTAACCGCAAGACTAGCAAACGATAGAGTCGCGAGACAT 123 201 AAATTCTTATTTAATAATTCATTGCCACTCATATCTGATTACAGCGGCGA 250 *|*||**|*||*||||**||**|**||||||||||*||*|||||*||||| 124 GATTTTCTCTTCAATACCTCTATTGCACTCATATCGGACTACAGTGGCGA 173 251 AGACTCAAATGGACACCAACTTCAAGCAACAATTAAGATACCAGATGAGA 300 *||*||*|||||**|*||*||||||||||||||||*||||||**|*|||| 174 GGATTCGAATGGTAATCAGCTTCAAGCAACAATTACGATACCGAACGAGA 223 301 TTACGAACCCTAAAGAGTACGATCCCTCCGATTATCCGTTAGCTGAAGAT 350 |||**|||||*||*|||||*|||||*||*||||||||*||*|||||*||* 224 TTATCAACCCCAAGGAGTATGATCCTTCAGATTATCCATTGGCTGAGGAC 273 351 GAATCTTTCTTCAAACAAGGTCACAAGTATGATTACTTAGTGACCTTCAG 400 |||||||||||*||*||||||||||||||||||||||||||*|||||*|| 274 GAATCTTTCTTTAAGCAAGGTCACAAGTATGATTACTTAGTAACCTTTAG 323 401 AGCAGGCTCATTAACTAATACATACGAACCGAAAACCAAGATGTACAAAT 450 ||||||||||||*||*||||||||*||||||||*||*||||||||||||* 324 AGCAGGCTCATTGACCAATACATATGAACCGAAGACTAAGATGTACAAAC 373 451 TACACGCTGCTTTAGATAGATTGATGCATGTCAAACAGCGTAAATCACGT 500 ||||*|||||*|||||||**||*|||||*||*||*||||||||||||||| 374 TACATGCTGCGTTAGATAAGTTAATGCACGTTAAGCAGCGTAAATCACGT 423 501 TTTGCAGATTTGTGGCGTGAACTATGTGCAGTCATCGCTTCGTTGGATGT 550 ||*||*|||*|||||||*||**||||*||*||*||||||||*||*||||| 424 TTCGCTGATCTGTGGCGCGAGTTATGCGCGGTTATCGCTTCATTAGATGT 473 551 ATGGTATCAAACTACGAACTATCCTCTACGCACATATGTGAAGTTTCTGT 600 |||||||||||||||||||||*||*||*|||||||||||*|||*|**||| 474 ATGGTATCAAACTACGAACTACCCGCTGCGCACATATGTAAAGCTGTTGT 523 601 TCCATAAGGGCGACGAATTCCCATTCTATGAATCACCTTCGCAAGACAAG 650 |*|||||*||*|||||*||*|||||||||||||||||*|||||*||*|*| 524 TTCATAAAGGTGACGAGTTTCCATTCTATGAATCACCATCGCAGGATAGG 573 651 ATAGTATTTAATGACAAGAGTGTAGCATCCATACTACCCACATTCGTATA 700 ||**||||*|||||||||||*||*|||||*|||*||||*|||||*||*|| 574 ATCATATTCAATGACAAGAGCGTTGCATCAATATTACCTACATTTGTGTA 623 701 CACCTGCTGTCAAGTAGGTACAGCAATAATGTCAGGCATTCTAACGCATG 750 |||*||*||*||*|||||||||||||||||||||||*||||||||||||| 624 CACATGTTGCCAGGTAGGTACAGCAATAATGTCAGGTATTCTAACGCATG 673 751 TGGAGAGCATCGCTGCAATGAATCATTTTCTTCATTGTGCGAAAGATTCT 800 |*||||||||||*|||*||||||||*||**|*|||||*||||||||*||* 674 TTGAGAGCATCGTTGCGATGAATCACTTCTTGCATTGCGCGAAAGACTCA 723 801 TATATAGACGAGAAACTTAAAGTTAAAGGAATAGGTAGAAGTTGGTATCA 850 ||||||||*||||||||*||**|*|||||||||||*|||||*|||||||| 724 TATATAGATGAGAAACTCAAGATCAAAGGAATAGGGAGAAGCTGGTATCA 773 851 AGAAGCGCTGCATAATGTTGGGCAAGTAACAGTACCGGTATGGTCACAAT 900 ||||||**|*||||||||*||*||||**|||||*||*||*|||||*||*| 774 AGAAGCATTACATAATGTAGGTCAAGCGACAGTGCCAGTGTGGTCTCAGT 823 901 TTAACGAGATTATCGGTCACAGGACAAAGAATACTTCTGAACCACACTTT 950 |||||||**||||*||||||||||||||||*|||*||*||*||*||*||| 824 TTAACGAAGTTATTGGTCACAGGACAAAGAGTACATCCGAGCCGCATTTT 873 951 GTGTCAGCTACGTTCACAGCGTTACGCGCAAAACGAGCGGAGTTGCTATA 1000 ||||*|*||||*||*|*|*|||||||*||*||*||||||||**|**|||| 874 GTGTTATCTACATTTATATCGTTACGTGCGAAGCGAGCGGAACTATTATA 923 1001 TTCTGAGTTCAATGATTATATAAACAGAGCACTAAGATTAAGCAAGACTC 1050 **||||*||*||||**|||||||||*||||**||**|*||||*||||||| 924 CCCTGAATTTAATGCATATATAAACCGAGCGATACAACTAAGTAAGACTC 973 1051 AGAATGATGTTGCTAACTACTATGCGGCCTGTAGGGCAATGACCAATGAT 1100 ||||||||||||||||*|||||*||*||||||||*||||||||*||*||| 974 AGAATGATGTTGCTAATTACTACGCCGCCTGTAGAGCAATGACTAACGAT 1023 1101 GGAACTTTCCTTGCGACATTAACCGAATTATCCTTAGATGCTGCGGTATT 1150 |||||||||||*||*||*|||||*||*|||||*||||||||*||*||||| 1024 GGAACTTTCCTCGCAACGTTAACAGAGTTATCTTTAGATGCAGCTGTATT 1073 1151 CCCTAGGATAGAACAGCGCTTAGTAACAAGACCGGCGGTGCTAATGAGTA 1200 |||*||*|||||*||*|**|||||*||||||||*||*||**|*||||||| 1074 CCCCAGAATAGAGCAACATTTAGTCACAAGACCAGCAGTTTTGATGAGTA 1123 1201 ATGCGCGACATGAATCACTGAGACAGAAATATACAGACGGTGTTGGTTCA 1250 ||*||||||||||*|||||*|**||*||*|||||**|*||*||||||||| 1124 ATACGCGACATGAGTCACTAAAGCAAAAGTATACGAATGGCGTTGGTTCA 1173 1251 ATAGCTCAGTCATACTTATCTAGCTTCACTGATGAAGTCGCTAGACGTGT 1300 |||||||||||*||||||||*||*||*||*|||||**||||||*|||||| 1174 ATAGCTCAGTCGTACTTATCAAGTTTTACAGATGAGATCGCTAAACGTGT 1223 1301 TAACGGTATACATCATGATGAGGCATGGCTAAATTTCCTGACCACGTCAT 1350 *||*|||||||||||||||||*||||||*||||||||||*||*||*|||| 1224 CAATGGTATACATCATGATGAAGCATGGTTAAATTTCCTAACTACATCAT 1273 1351 CACCAGGTAGGAAGCTAACGGAAATTGAAAAGCTAGAAGTGGGAGGTGAC 1400 ||||||||||*||**||||*||||||||*||**|||||||*||||||||| 1274 CACCAGGTAGAAAATTAACAGAAATTGAGAAATTAGAAGTCGGAGGTGAC 1323 1401 GTAGCAGCATGGTCTAATTCAAGAATTGTTATGCAGGCGGTTTTCGCACG 1450 ||||||||*|||||*||*|||||*|||||*|||||*||*||*|||||*|| 1324 GTAGCAGCGTGGTCAAACTCAAGGATTGTCATGCAAGCAGTATTCGCGCG 1373 1451 TGAATATCGTACCCCTGAAAGGATATTCAAATCACTTAAAGCGCCCATTA 1500 ||||||*|||||*||*|||||*||||||||*|||||*|||||*||*|||| 1374 TGAATACCGTACACCAGAAAGAATATTCAAGTCACTCAAAGCACCAATTA 1423 1501 AGCTCGTTGAACGCCAGCAGTCAGATCGAAGGCAGAGAGCAATCTCAGGA 1550 ||||*|||||*||*|||||||||||||||*|*||*|||||*||*||*||| 1424 AGCTTGTTGAGCGTCAGCAGTCAGATCGACGACAAAGAGCCATATCCGGA 1473 1551 TTAGACAACGATCGCTTGTTTCTAAGTTTCATGCCATATACCATCGGAAA 1600 |||||*||*|||*|*||*||||||||||||||||||||*||*||*||||| 1474 TTAGATAATGATAGATTATTTCTAAGTTTCATGCCATACACTATTGGAAA 1523 1601 GCAAATATATGATTTGAATGATAACGCTGCACAAGGTAAACAGGCAGGTA 1650 |||*|||||*||*|||||*|||||||||||*||*||||||||*||||||| 1524 GCAGATATACGAGTTGAACGATAACGCTGCTCAGGGTAAACAAGCAGGTA 1573 1651 ATGCGTTTGATATCGGCGAGATGTTGTATTGGACTTCGCAACGCAACGTT 1700 *|||*||*|*|||*||*||*|||||*||||||||*||*||*|||||*||* 1574 GTGCTTTCGTTATTGGTGAAATGTTATATTGGACATCACAGCGCAATGTA 1623 1701 TTACTGTCATCGATAGATGTGGCTGGCATGGACGCATCCGTTACAACCAA 1750 *|**|*||*||*||*|||||*|||||*||||||||*||*|||||*||*|| 1624 CTCTTATCCTCAATTGATGTAGCTGGTATGGACGCCTCTGTTACTACGAA 1673 1751 TACCAAAGATATATATAATACTTTTGTGCTAGATGTCGCTAGTAAATGTA 1800 *||*|||||*|||||*|||||*||*|||*|||||||*||*|||||||||| 1674 CACTAAAGACATATACAATACATTCGTGTTAGATGTTGCCAGTAAATGTA 1723 1801 CGGTACCGCGCTTTGGACCATATTACGCTAAGAATATGGAAGTTTTTGAG 1850 |*||||||||*||||||||||||||||||||||||*|||||||*|||||* 1724 CAGTACCGCGTTTTGGACCATATTACGCTAAGAATGTGGAAGTCTTTGAA 1773 1851 GTTGGTAAGCGTCAGTCACAGGTAAAATACGTTAATGCGGCATGGCAGGC 1900 |**||||||||*|||||||||||*|*|||*||*||||||||||||||||| 1774 GCAGGTAAGCGCCAGTCACAGGTTAGATATGTCAATGCGGCATGGCAGGC 1823 1901 ATGTGCATTAGAAGCAGCGAATTCACAAACTTCAACCTCGTATGAAAGCG 1950 *||||||||||||||*||*||*||*|||||*|||||*||*||*||||||| 1824 GTGTGCATTAGAAGCGGCAAACTCGCAAACATCAACTTCATACGAAAGCG 1873 1951 AGATATTTGGACAGGTTAAGAACGCAGAGGGCACATATCCATCAGGACGA 2000 |*||*||*||||||||*|||||*||||||||*||*|||||||||||*||* 1874 AAATCTTCGGACAGGTGAAGAATGCAGAGGGTACGTATCCATCAGGCCGT 1923 2001 GCAGATACTTCAACGCATCACACGGTATTGCTTCAAGGTTTAGTGCGAGG 2050 ||*||*|||||*||*||*||*||*||||||||*|||||||||||*||*|| 1924 GCGGACACTTCGACTCACCATACCGTATTGCTCCAAGGTTTAGTACGTGG 1973 2051 GAATGAACTGAAGAGGGCATCAGATGGTAAGAATTCATGCCTCGCTACAA 2100 *|||||*||*|||||*||*||*|||||*|||||||||||**|*||*||*| 1974 AAATGAGCTTAAGAGAGCTTCGGATGGCAAGAATTCATGTTTAGCCACGA 2023 2101 TTAAGATACTTGGTGATGATATTATGGAAATATTTCAGGGTAGTCAAGAT 2150 ||||*|||||||||||*||*||*|||||||||||*|||||*|||*|***| 2024 TTAAAATACTTGGTGACGACATCATGGAAATATTCCAGGGCAGTGAGAGT 2073 2151 GACACTCATCATCATGCTGTTTCGAACGCAAATGTCTTAAACGAAAGCGG 2200 *||||**|**|*||||||||*|||||*||||***|*||*||*||*||*|| 2074 AACACGTACGACCATGCTGTGTCGAATGCAAGCATTTTGAATGAGAGTGG 2123 2201 TTTTGCAACAACAGCAGAATTATCGCAGAACTCTATTGTATTATTGCAAC 2250 *||||||||*|||||*|||||||||||*|||||*|||||**||||*||*| 2124 CTTTGCAACGACAGCTGAATTATCGCAAAACTCGATTGTGCTATTACAGC 2173 2251 AGTTAGTAGTGAACGGGACGTTCTGGGGCTTTGCAGATAGGATATCTTTA 2300 |**||||||||||*|||||*||||||||*||*|||||*||*||*|||||| 2174 AACTAGTAGTGAATGGGACCTTCTGGGGTTTCGCAGACAGAATCTCTTTA 2223 2301 TGGACTAGGGAAGACACAAAGGATATCGGACGACTCAATCTCGCTATGAT 2350 |||||**|*||*||*||||||||||||||*||*||*|||||*|||||||| 2224 TGGACGCGAGAGGATACAAAGGATATCGGGCGGCTTAATCTTGCTATGAT 2273 2351 GGAACTAAATGCTCTTCTCGATGATTTATTATTCAGAGTGCGGCGTCCGG 2400 ||||||*||*|||||**|*|||||||||*|*||**||||*||*||*||*| 2274 GGAACTGAACGCTCTAATTGATGATTTAGTGTTTCGAGTACGCCGACCAG 2323 2401 AAGGGTTAAAGATGTTAGGTTTCTTTTGTGGTGCGATCTGCTTGCGGCGT 2450 |*||**|*||||||*|*||||||||||||||*|||||*||**|*||*||| 2324 AGGGTCTGAAGATGCTTGGTTTCTTTTGTGGGGCGATATGTCTACGTCGT 2373 2451 TTCACTTTGAGCGTAGATAACAACTTGTATGATAGCACATATAATAGTCT 2500 ||*||*||*||*|||||||||||*||*|||||*|||||*||*||||*||| 2374 TTTACCTTAAGTGTAGATAACAAATTATATGACAGCACGTACAATAATCT 2423 2501 TAGCAAGTACATGACGCTAATCAAGTATGACAAGAATCCCGATTTTGACT 2550 *|||||*||*|||||**|*||*|||||||||||||||||||||||||||| 2424 CAGCAAATATATGACATTGATTAAGTATGACAAGAATCCCGATTTTGACT 2473 2551 CTACACTGATGAGTTTAATTCTACCTCTTACGTGGTTATTTATGCCAAGG 2600 |*||||||||||||*||||**|||||||**|*|||||*|||||||||||* 2474 CCACACTGATGAGTCTAATCTTACCTCTCGCATGGTTGTTTATGCCAAGA 2523 2601 GGAGGGGAGTATCCTGCGTATCCATTTGAGCGTAGAGACGGCACATTTAC 2650 |||||*||*|||||*|||||||||||*|||||||||||*||*||*||*|| 2524 GGAGGAGAATATCCCGCGTATCCATTCGAGCGTAGAGATGGGACGTTCAC 2573 2651 TGAGGATGAGTCGATGTTCACCGCTAGAGGGGCGTATAAAAGACGATTGT 2700 |||*||||||||*||||||||*||||||||*|||||*||||||||*||*| 2574 TGAAGATGAGTCAATGTTCACTGCTAGAGGAGCGTACAAAAGACGTTTAT 2623 2701 TATATGATATAAGTAATATTCGAGAAATGATACAACAAAATTCTTTGGCG 2750 ||||||||*||||*||||||*||||*||||||||*|||||*||**||||* 2624 TATATGATGTAAGCAATATTAGAGAGATGATACAGCAAAACTCGATGGCC 2673 2751 CTAGATGATGAATTGTTACATGAGTATGGCTTCACGGGAGCGTCGCTACT 2800 *|*||||||||**|**|||||||||||||*||*||*|||||*|*|*|*|| 2674 TTGGATGATGAGCTACTACATGAGTATGGATTTACAGGAGCATTGTTGCT 2723 2801 TATAGATCTGAACATACTTGACTTGATTGATGAAGTCAAGAAAGAAGACA 2850 ||||||*||*||||||*|*||**|*||*|||||*|||||||||||||||| 2724 TATAGACCTAAACATATTGGATCTAATCGATGAGGTCAAGAAAGAAGACA 2773 2851 TTAGTCCGGTTAAGGTGAGTGAGCTAGCGACATCTCTAGAACAGTTGGGA 2900 |*|||||*||||||||*||||||||*||*|||||**||||*|||*|*||| 2774 TCAGTCCAGTTAAGGTAAGTGAGCTGGCCACATCATTAGAGCAGCTAGGA 2823 2901 AAACTAGGTGAGCGTGAGAAATCTCGACGCGCTGCTAGTGATCTCAAAGT 2950 ||||||||*||*||||||||||||||*|||||*||*||||||||*||*|| 2824 AAACTAGGCGAACGTGAGAAATCTCGGCGCGCCGCGAGTGATCTAAAGGT 2873 2951 TCGTGGTCACGCTTTAAGTAACGATATTGTGTATGGGTATGGATTGCAAG 3000 ||||||||||||*||*|||||*|||||*||*|||||*||*||*||*||*| 2874 TCGTGGTCACGCATTGAGTAATGATATAGTCTATGGATACGGGTTACAGG 2923 3001 AGAAAATTCAGAAATCAGCGATGGCGACTAAAGAGACGACAGTGCAATCG 3050 ||||*||||||||*|||||*|||||*||||||||*||||||||*|||||* 2924 AGAAGATTCAGAAGTCAGCAATGGCAACTAAAGAAACGACAGTACAATCA 2973 3051 AAACGAATATCATTACGTTTACATGAGGTCATAGCGACTAAGACACGCGA 3100 ||**||*||||||*||||||*|||||*||*||||***|*|||||*||||| 2974 AAGAGAGTATCATCACGTTTGCATGATGTTATAGTAGCAAAGACTCGCGA 3023 3101 TTATAGAATACCTACAACGCCAGCGGATGCACTACATTTATATGAGTTTG 3150 |||||*||||*|*||*|**||*||*|||||||||||||||*|*||||||| 3024 TTATAAAATATCCACGATACCGGCAGATGCACTACATTTACACGAGTTTG 3073 3151 AGGGTGAGGAAGTAGTCATGGATCTATTACCACACGCCAAACACACTTCA 3200 |||*||||||*||***|*|||||||*||||||||||||||*|||||*||| 3074 AGGTTGAGGATGTGACCGTGGATCTTTTACCACACGCCAAGCACACATCA 3123 3201 TATTCTAATCTTGCGTATAATATGTCCTTCGGTAGTGATGGTTGGTTTGC 3250 ||*||*|*|||*||||||||*|||||*||*|||||||||||||||||*|| 3124 TACTCCAGTCTCGCGTATAACATGTCATTTGGTAGTGATGGTTGGTTCGC 3173 3251 TTTCGCACTGTTGGGAGGTCTAGATAGGTCTGCTATTCTATTGCGTCTAG 3300 *||*||**|**||||*||||||||*||*||*||||***|**||||*|||| 3174 ATTTGCGTTACTGGGGGGTCTAGACAGATCAGCTAACTTGCTGCGCCTAG 3223 3301 ATGTGGCTTCAATACGCGGGAATTATCATAAATTTAGTTATGATGACCCA 3350 ||||*|||||*|||||*||*|||||*||*||*|||||*||||||||*||| 3224 ATGTAGCTTCTATACGTGGAAATTACCACAAGTTTAGCTATGATGATCCA 3273 3351 GTTTTCAAGCAGGGCTACAAGATATATAAATCTGACGCAACGTCACTTGA 3400 |||||*||*|||||*||*||*|||||*||*||*|||||*||***|*|**| 3274 GTTTTTAAACAGGGGTATAAAATATACAAGTCCGACGCGACACTATTAAA 3323 3401 TGATTTCTTTATTGCTATTTCTGCGGGACCGAAGGAGCAGGGTATCCTGT 3450 *||||||||*|*|||*|||||*|||||*||*||||||||*||||||||*| 3324 CGATTTCTTCACTGCCATTTCAGCGGGTCCAAAGGAGCAAGGTATCCTAT 3373 3451 TACGAGCGTTCGCATATTACAGTTTATATGGTAATGTTGAGTATCATTAC 3500 ||||*|||||*|||||*|||||*|||||||||||||||||||||||*||* 3374 TACGGGCGTTTGCATACTACAGCTTATATGGTAATGTTGAGTATCACTAT 3423 3501 GTATTATCACCGAGACAACTGTTCTTCCTATCAGATAATCCAGTATCTGC 3550 ||*||||||||*|||||*||*||||||||*||||||||||||||*||*|| 3424 GTTTTATCACCAAGACAGCTATTCTTCCTCTCAGATAATCCAGTGTCAGC 3473 3551 AGAAAGATTAGTACGTATACCTCCTAGCTATTATGTGTCTACACAATGCA 3600 ||||*|||||||*||*||||||||*|**||*||*||*|||||||||||** 3474 AGAACGATTAGTGCGCATACCTCCAAAGTACTACGTCTCTACACAATGTC 3523 3601 GAGCCTTATACAACATCTTCTCTTATCTACACATCCTACGGAGTATCACA 3650 ||||*||||||||*||*|||||*|||*||||*|||||||||||*||**|| 3524 GAGCTTTATACAATATATTCTCGTATTTACATATCCTACGGAGCATAGCA 3573 3651 AGTCATGAGGGTAAGCGTTTAAAGATGGTTTTACATGCAGGGCTAATAGC 3700 |*|*||***|||||*|||*|*|||||||||*|||||*|||||*|*||||| 3574 AATAATCGAGGTAAACGTCTCAAGATGGTTCTACATCCAGGGTTGATAGC 3623 3701 GTACGTTAGAGGTACAAGTTCAAGCGCAATTCTGCCTGAGGCAGATACGG 3750 |||*||*|||||*||||||**|*|*|||||||||||||||||*||||**| 3624 GTATGTCAGAGGCACAAGTCAAGGTGCAATTCTGCCTGAGGCGGATAACG 3673 3751 TGTAGATTAGTATTTGATAGCAGCTAGGCGCGCCGCGACGAAGTGTGAAG 3800 |||||||*|||***********|||||||********************* 3674 TGTAGATGAGT-----------GCTAGGC--------------------- 3691 3801 TTGATTTGGAGGCCTCCGAGTGGCCGCCAGATGTACGCTGTTCAGAGTTA 3850 ************************************************** -------------------------------------------------- 3851 GCC 3853 *** ---