NC_001351 AY594207
  1 CTGGGGAATTCTCGAGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCA 50
    ||||||||||||||||||||||||||||||||||||||||||||||||||
  1 CTGGGGAATTCTCGAGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCA 50

 51 GGGAGGAGACTTACCTGAGAAAGGAGCCCCGGGGCAACTCTTCTCAGAAT 100
    ||||||||||||||||||||||||||||||||||||||||||||||||||
 51 GGGAGGAGACTTACCTGAGAAAGGAGCCCCGGGGCAACTCTTCTCAGAAT 100

101 CCAGCGAGAGGCGTAGGAGAGAGGGCCGCGGTGCTCTGGAGTAGAGGCTT 150
    ||||||||*|||||*|||||||||||||||||||||||*|||||||||||
101 CCAGCGAGGGGCGT-GGAGAGAGGGCCGCGGTGCTCTGAAGTAGAGGCTT 149

151 CTTGCTTCGAAACACCATCGATCGTCCCTTCTTCTTTTACCTTCTCCTGG 200
    ||*||||||||||||||||||||||||||||||||||*||||||||||||
150 CT-GCTTCGAAACACCATCGATCGTCCCTTCTTCTTT-ACCTTCTCCTGG 197

201 CTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCGTCTTCCA 250
    ||||||***||||||||||||||||||||||||*||||||||||||||||
198 CTCTTCGAGTGAGACGCGACCGGTGGCATCACCCCTCGGTTCGTCTTCCA 247

251 ACCTGCTTTTTGTCTATCTAAGCCTCTGCCGCGGATCCTCTCTTGAGCCC 300
    |||||||||||||||||||*||||||||||||||||||||||||||||||
248 ACCTGCTTTTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAGCCC 297

301 CT 302
    ||
298 CT 299