NC_001351 AB054611
  1 CTGGGGAATTCTCGAGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCA 50
    |||||||||||||||||||||||||*||||||||||||||||||||||||
  1 CTGGGGAATTCTCGAGTTGCCGCATAGGCAAGCAAAGAAAAAACAAGGCA 50

 51 GGGAGGAGACTTACCTGAGAAAGGAGCCCCGGGGCAACTCTTCTCAGAAT 100
    |||||||*||||||||||||||||||||||||||||||||||||||||||
 51 GGGAGGA-ACTTACCTGAGAAAGGAGCCCCGGGGCAACTCTTCTCAGAAT 99

101 CCAGCGAGAGGCGTAGGAGAGAGGGCCGCGGTGCTCTGGAGTAGAGGCTT 150
    ||||||*|*|||||*|||||||||||||||||||||||||||||||||||
100 CCAGCGGG-GGCGT-GGAGAGAGGGCCGCGGTGCTCTGGAGTAGAGGCTT 147

151 CTTGCTTCGAAACACCATCGATCGTCCCTTCTTCTTTTACCTTCTCCTGG 200
    ||*||||||||||||||||||||||||||||||||||*||||*||*||||
148 CT-GCTTCGAAACACCATCGATCGTCCCTTCTTCTTT-ACCTCCTTCTGG 195

201 CTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCGTCTTCCA 250
    |||||||||||||||||||||||||||||||||||||||||||||**||*
196 CTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCGTC--CCG 243

251 ACCTGCTTTTTGTCTATCTAAGCCTCTGCCGCGGATCCTCTCTTGAGCCC 300
    |||||||||||||||||||*||||||||||||||||||||||||||||||
244 ACCTGCTTTTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAGCCC 293

301 CT 302
    ||
294 CT 295