Severe Acute Respiratory Syndrome (SARS)	SARS Home

NP_828866.1 AIASEFSSLPSYAAYATAQEAYEQAVA---NGDS-EVVLKKLKKSLNVAKSEFDRDAAMQ SARS-CoV
NP_840006.1 SVASAYAALPSWIALEKARADLEEAKK---NDVS-PQILKQLTKAFNIAKSDFEREASVQ TGEV    
NP_839962.1 SVASTYVGLPSYVIYENARQQYEDAVN---NGSP-PQLVKQLRHAMNVAKSEFDREASTQ PEDV    
NP_742135.1 ALQSEFVNMASFVEYEVAKKNLDEARS---SGSANQQQLKQLEKACNIAKSAYERDRAVA BCoV    
NP_835349.1 SVASSFVGMPSFVAYETARQEYENAVA---NGSS-PQIIKQLKKAMNVAKAEFDRESSVQ HCoV-229E
NP_740613.1 ALQSEFVNMASFVEYELAKKNLDEAKA---SGSANQQQIKQLEKACNIAKSAYERDRAVA MHV     
NP_740626.1 SVTQEFSHIPSYAEYERAKNLYEKVLVDSKNGGVTQQELAAYRKAANIAKSVFDRDLAVQ IBV     
Consensus   ul.SpasshsSal.YE.A+p.h=pA.s   pGss .QblKpLcKAhNlAKS.a=R=.uh.


NP_828866.1 RKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVP SARS-CoV
NP_840006.1 KKLDKMAEQAAASMYKEARAVDRKSKIVSAMHSLLFGMLKKLDMSSVNTIIDQARNGVLP TGEV    
NP_839962.1 RKLDRMAEQAAAQMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNLAKDGVVP PEDV    
NP_742135.1 RKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVP BCoV    
NP_835349.1 KKINRMAEQAAAAMYKEARAVNRKSKVVSAMHSLLFGMLRRLDMSSVDTILNMARNGVVP HCoV-229E
NP_740613.1 RKLERMADLALTNMYKEARINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVP MHV     
NP_740626.1 KKLDSMAERAMTTMYKEARVTDRRAKLVSSLHALLFSMLKKIDSEKLNVLFDQASSGVVP IBV     
Consensus   +KL=+MA=bAhspMYKEARlsp++uKlVSAhpohLFuMl++LD.pulppIlp.A.pGhVP


NP_828866.1 LNIIPLTTAAKLMVVVPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINM-- SARS-CoV
NP_840006.1 LSIIPAASATRLVVITPSLEVFSKIRQENNVHYAGAIWTIVEVKDANGSHVHLKEVTA-- TGEV    
NP_839962.1 LSVIPAVSATKLNIVTSDIDSYNRIQREGCVHYAGTIWNIIDIKDNDGKVVHVKEVTA-- PEDV    
NP_742135.1 LNAIPSLAANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLNEISD-- BCoV    
NP_835349.1 LSVIPATSAARLVVVVPDHDSFVKMMVDGFVHYAGVVWTLQEVKDNDGKNVHLKDVTK-- HCoV-229E
NP_740613.1 LNAIPSLTSNTLTIIVPDKQVFDQVVDNVYVTYAGNVWHIQFIQDADGAVKQLNEIDV-- MHV     
NP_740626.1 LATVPIVCSNKLTLVIPDPETWVKCVEGVHVTYSTVVWNIDTVIDADGTELHPTSTGSGL IBV     
Consensus   LplIP..ouspLsllsPD.psasph.p.s.VpYAuslWpI.plbDsDGp..plp=lp.  


NP_828866.1 ---DNSPNLAWPLIVTALRAN---SAVKLQ SARS-CoV
NP_840006.1 ---ANELNLTWPLSITCERTT------KLQ TGEV    
NP_839962.1 ---QNAESLSWPLVLGCERIV------KLQ PEDV    
NP_742135.1 ---DCN----WPLVIIANRHNE-VSATVLQ BCoV    
NP_835349.1 ---ENQEILVWPLILTCERVV------KLQ HCoV-229E
NP_740613.1 ---NST----WPLVIAANRHNE-VSTVVLQ MHV     
NP_740626.1 TYCISGANIAWPLKVNLTRNGHNKVDVVLQ IBV     
Consensus      .p.    WPL.lshpR.s      .LQ                             

Similarities are highlighted by colors, if at least 80% of residues in a column are identical or fall into at least one of the following amino acid groups: aromatic (FHWY), aliphatic (ILVA), hydrophobic (ACFILMVWY), alcohol (STC), charged (DEHKR), positive (HKR), negative (DE), polar (CDEHKNQRST), tiny (AGS), small (ACDGNPSTV), or bulky (EFIKLMQRWY). Mouse-over the accession numbers on the left for full protein names or click for a corresponding sequence record. Abbreviated virus names are shown in italics on the right.

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