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Severe Acute Respiratory Syndrome (SARS) |
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NP_828870.1 AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDV SARS-CoV NP_840010.1 AAGMCVVCGSQTVLRCGDCLRRPLLCTKCAYDHVMGTKHKFIMSITPYVCSFNGCNVNDV TGEV NP_839966.1 SAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVIGTTHKFILAITPYVCCASDCGVNDV PEDV NP_742139.1 SVGACVVCSSQTSLRCGSCIRKPLLCCKCCYDHVMATDHKYVLSVSPYVCNAPGCDVNDV BCoV NP_835353.1 AAGLCVVCGSQTVLRCGDCLRRPMLCTKCAYDHVFGTDHKFILAITPYVCNTSGCNVNDV HCoV-229E NP_740617.1 SVGACVVCSSQTSLRCGSCIRKPLLCCKCAYDHVMSTDHKYVLSVSPYVCNSPGCDVNDV MHV NP_740630.1 SCGVCVVCNSQTILRCGNCIRKPFLCCKCCYDHVMHTDHKNVLSINPYICSQLGCGEADV IBV Consensus ulGlCVVCsSQTsLRCGpClR+PhLCoKChYDHVhuTpHKhlLulpPYVCp.sGCsVpDV NP_828870.1 TQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDY SARS-CoV NP_840010.1 TKLFLGGLSYYCMNHKPQLSFPLCANGNVFGLYKSSAVGSEAVEDFNKLAVSDWTNVEDY TGEV NP_839966.1 TKLYLGGLSYWCHEHKPRLAFPLCSAGNVFGLYKNSATGSPDVEDFNRIATSDWTDVSDY PEDV NP_742139.1 TKLYLGGMSYYCEDHKPQYSFKLVMNGMVFGLYKQSCTGSPYIDDFNRIASCKWTDVDDY BCoV NP_835353.1 TKLYLGGLNYYCVDHKPHLSFPLCSAGNVFGLYKSSALGSMDIDVFNKLSTSDWSDIRDY HCoV-229E NP_740617.1 TKLYLGGMSYYCEDHKPQYSFKLVMNGMVFGLYKQSCTGSPYIEDFNKIASCKWTEVDDY MHV NP_740630.1 TKLYLGGMSYFCGNHKPKLSIPLVSNGTVFGIYRANCAGSENVDDFNQLATTNWSIVEPY IBV Consensus TKLYLGGhSYaC.pHKPphSF.Lh.sG.VFGLYKpohsGS..l=DFNplAoocWoplpDY NP_828870.1 ILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNY SARS-CoV NP_840010.1 KLANNVKESLKIFAAETVKAKEESVKSEYAYAVLKEVIGPKEIVLQWEASKTKPPLNRNS TGEV NP_839966.1 RLANDVKDSLRLFAAETIKAKEESVKSSYACATLHEVVGPKELLLKWEVGRPKPPLNRNS PEDV NP_742139.1 ILANECTERLKLFAAETQKATEEAFKQSYASATIQEIVSERELILSWEIGKVKPPLNKNY BCoV NP_835353.1 KLANDAKESLRLFAAETVKAKEESVKSSYAYATLKEIVGPKELLLLWESGKAKPPLNRNS HCoV-229E NP_740617.1 VLANECTERLKLFAAETQKATEEAFKQCYASATIREIVSDRELILSWEIGKVRPPLNKNY MHV NP_740630.1 ILANRCSDSLRRFAAETVKATEELHKQQFASAEVREVFSDRELILSWEPGKTRPPLNRNY IBV Consensus bLANphp=pL+lFAAET.KApEEshKppYA.Apl+Ellus+ELlLpWE.GKs+PPLN+N. NP_828870.1 VFTGYRVTKNSKVQIGEYTFEKGDY-GDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPT SARS-CoV NP_840010.1 VFTCFQISKDTKIQLGEFVFEQSEYGSDSVYYKSTSTYKLTPGMIFVLTSHNVSPLKAPI TGEV NP_839966.1 VFTCYHITKNTKFQIGEFVFEKAEYDNDAVTYKTTATTKLVPGMVFVLTSHNVQPLRAPT PEDV NP_742139.1 VFTGYHFTKNGKTVLGEYVFDKSEL-TNGVYYRATTTYKLSVGDVFVLTSHSVANLSAPT BCoV NP_835353.1 VFTCFQITKDSKFQVGEFVFEKVDYGSDTVTYKSTATTKLVPGMLFILTSHNVAPLRAPT HCoV-229E NP_740617.1 VFTGYHFTNNGKTVLGEYVFDKSEL-TNGVYYRATTTYKLSVGDVFILTSHAVSSLSAPT MHV NP_740630.1 VFTGYHFTRTSKVQLGDFTFEKGEG-KDVVYYKATSTAKLSVGDIFVLTSHNVVSLVAPT IBV Consensus VFTsaphT+psK..lGEasF=Ku=h ppsV.Y+uTsT.KLssG.lFlLTSHpV.sLpAPT NP_828870.1 LVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYY SARS-CoV NP_840010.1 LVNQEKYNTISKLYPVFNIAEAYNTLVPYYQMIGKQKFTTIQGPPGSGKSHCVIGLGLYY TGEV NP_839966.1 IANQERYSTIHKLHPAFNIPEAYSSLVPYYQLIGKQKITTIQGPPGSGKSHCVIGLGLYY PEDV NP_742139.1 LVPQENYSSIR-FASVYSVLETFQNNVVNYQHIGMKRYCTVQGPPGTGKSHLAIGLAVYY BCoV NP_835353.1 MANQEKYSTIYKLHPSFNVSDAYANLVPYYQLIGKQRITTIQGPPGSGKSHCSIGIGVYY HCoV-229E NP_740617.1 LVPQENYTSIR-FASVYSVPETFQNNVPNYQHIGMKRYCTVQGPPGTGKSHLAIGLAVYY MHV NP_740630.1 LCPQQTFSRFVNLRPNVMVPECFVNNIPLYHLVGKQKRTTVQGPPGSGKSHFAIGLAVYF IBV Consensus llsQEpYppI. h.sshpls=sa.p.Vs.YQ.lGbp+hoTlQGPPGoGKSHhlIGLulYY NP_828870.1 PSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCT SARS-CoV NP_840010.1 PQARIVYTACSHAAVDALCEKAAKNFNVDRCSRIIPQRIRVDCYTGFKPNNTNAQYLFCT TGEV NP_839966.1 PGARIVFTACSHAAVDSLCVKASTAYSNDKCSRIIPQRARVECYDGFKSNNTSAQYLFST PEDV NP_742139.1 CTARVVYTAASHAAVDALCEKAYKFLNINDCTRIVPAKVRVECYDKFKINDTTRKYVFTT BCoV NP_835353.1 PGARIVFTACSHAAVDSLCAKAVTAYSVDKCTRIIPARARVECYSGFKPNNNSAQYVFST HCoV-229E NP_740617.1 CTARVVYTAASHAAVDALCEKAHKFLNINDCTRIVPAKVRVDCYDKFKVNDTTRKYVFTT MHV NP_740630.1 SSARVVFTACSHAAVDALCEKAFKFLKVDDCTRIVPQRTTVDCFSKFKANDTGKKYIFST IBV Consensus ssARlVaTAhSHAAVDuLC.KA.phhplpcCoRIlP.+lRV=Cap.FKsNpTs.pYlFoT NP_828870.1 VNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQLPAPRTLLTKGTLEP SARS-CoV NP_840010.1 VNALPEASCDIVVVDEVSMCTNYDLSVINSRLSYKHIVYVGDPQQLPAPRTLINKGVLQP TGEV NP_839966.1 VNALPECNADIVVVDEVSMCTNYDLSVINQRISYRHVVYVGDPQQLPAPRVMISRGTLEP PEDV NP_742139.1 INALPEMVTDIVVVDEVSMLTNYELSVINARIRAKHYVYIGDPAQLPAPRVLLSKGTLEP BCoV NP_835353.1 VNALPEVNADIVVVDEVSMCTNYDLSVINQRISYKHIVYVGDPQQLPAPRVLISKGVMEP HCoV-229E NP_740617.1 INALPELVTDIIVVDEVSMLTNYELSVINSRVSAKHYVYIGDPAQLPAPRVLLNKGTLEP MHV NP_740630.1 INALPEVSCDILLVDEVSMLTNYELSFINGKINYQYVVYVGDPAQLPAPRTLLN-GSLSP IBV Consensus lNALPEhssDIlVVDEVSMhTNY=LSVIN.Rlph+HhVYlGDP.QLPAPRsLlp+GsLpP NP_828870.1 EYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKG- SARS-CoV NP_840010.1 QDYNVVTKRMCTLGPDVFLHKCYRCPAEIVKTVSALVYENKFVPVNPESKQCFKMFVKG- TGEV NP_839966.1 KDYNVVTQRMCALKPDVFLHKCYRCPAEIVRTVSEMVYENQFIPVHPDSKQCFKIFCKG- PEDV NP_742139.1 KYFNTVTKLMCCLGPDIFLGTCYRCPKEIVDTVSALVYENKLKAKNESSSLCFKVYYKG- BCoV NP_835353.1 IDYNVVTQRMCAIGPDVFLHKCYRCPAEIVNTVSELVYENKFVPVKEASKQCFKIFERG- HCoV-229E NP_740617.1 RYFNSVTKLMCCLGPDIFLGTCYRCPKEIVDTVSALVYNNKLKAKNDNSSMCFKVYYKG- MHV NP_740630.1 KDYNVVTNLMVCVKPDIFLAKCYRCPKEIVDTVSTLVYDGKFIANNPESRECFKVIVNNG IBV Consensus p.aNsVTpbMhsl.PDlFL.pCYRCP.EIVcTVS.LVY=NKh.s.p.pSpbCFKhah+G NP_828870.1 --VITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSS SARS-CoV NP_840010.1 --QVQIESNSSINNKQLEVVKAFLAHNPKWRKAVFISPYNSQNYVARRLLGLQTQTVDSA TGEV NP_839966.1 --NVQVDNGSSINRRQLDVVRMFLAKNPRWSKAVFISPYNSQNYVASRLLGLQIQTVDSS PEDV NP_742139.1 --VTTHESSSAVNMQQIYLINKFLKANPLWHKAVFISPYNSQNFAAKRVLGLQTQTVDSA BCoV NP_835353.1 --SVQVDNGSSINRRQLDVVKRFIHKNSTWSKAVFISPYNSQNYVAARLLGLQTQTVDSA HCoV-229E NP_740617.1 --QTTHESSSAVNMQQIHLISKFLKANPSWSNAVFISPYNSQNYVAKRVLGLQTQTVDSA MHV NP_740630.1 NSDVGHESGSAYNTTQLEFVKDFVCRNKQWREAIFISPYNAMNQRAYRMLGLNVQTVDSS IBV Consensus .sp.=puSulN.pQl.llp.Fl..Ns.WpcAVFISPYNSQNhlA.RlLGLpsQTVDSu NP_828870.1 QGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKIGILCIMSDRD-LYDKLQFTSLEIPRR SARS-CoV NP_840010.1 QGSEYDYVIYTQTSDTQHATNVNRFNVAITRAKVGILCIMCDRT-MYENLDFYELKD--- TGEV NP_839966.1 QGSEYDYVIYAQTSDTAHASNVNRFNVAITRAKKGILCIMCDRS-LFDLLKFFELKL--- PEDV NP_742139.1 QGSEYDYVIYSQTAETAHSVNVNRFNVAITRAKKGILCVMSNMQ-LFEALQFTTLTLDKV BCoV NP_835353.1 QGSEYDYVIFAQTSDTAHACNANRFNVAITRAKKGIFCIMSDRT-LFDALKFFEITM--- HCoV-229E NP_740617.1 QGSEYDFVIYSQTAETAHSVNVNRFNVAITRAKKGILCVMSSMQ-LFESLNFTTLTLDKI MHV NP_740630.1 QGSEYDYVIFCVTADSQHALNINRFNVALTRAKRGILVVMRQRDELYSALKFTELDS--- IBV Consensus QGSEYDYVIasQTu=T.HusNlNRFNVAITRAKbGILClMopbp La=.LpF.pLp. NP_828870.1 N---VATLQ SARS-CoV NP_840010.1 ---SKIGLQ TGEV NP_839966.1 -----SDLQ PEDV NP_742139.1 PQAVETRVQ BCoV NP_835353.1 -----TDLQ HCoV-229E NP_740617.1 N---NPRLQ MHV NP_740630.1 ----ETSLQ IBV Consensus spLQ
Similarities are highlighted by colors, if at least 80% of residues in a column are identical or fall into at least one of the following amino acid groups: aromatic (FHWY), aliphatic (ILVA), hydrophobic (ACFILMVWY), alcohol (STC), charged (DEHKR), positive (HKR), negative (DE), polar (CDEHKNQRST), tiny (AGS), small (ACDGNPSTV), or bulky (EFIKLMQRWY). Mouse-over the accession numbers on the left for full protein names or click for a corresponding sequence record. Abbreviated virus names are shown in italics on the right.