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Viruses  
  Retro-transcribing viruses - 138 complete genomes
Caulimoviridae  [61] Hepadnaviridae  [13] Retroviridae  [64]
* The list view for each taxonomy node shows only the next level of sublineages.
* Unclassified/unassigned names are written in copper

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Genome Accession Source information Segm Length  Protein  Neighbors Host Created Updated
Caulimoviridae
    Banana streak CA virus NC_015506 - 7408 nt 1   plants 05/06/2011 02/10/2015
    Banana streak GF virus NC_007002 strain:Goldfinger - 7263 nt 1   plants 05/16/2005 05/06/2009
    Banana streak IM virus NC_015507 - 7769 nt 2   plants 05/06/2011 02/10/2015
    Banana streak MY virus NC_006955 - 7650 nt 6   plants 04/07/2005 12/08/2008
    Banana streak OL virus NC_003381 - 7389 nt 1   plants 06/02/1998 02/04/2011
    Banana streak UA virus NC_015502 - 7519 nt plants 05/06/2011 02/10/2015
    Banana streak UI virus NC_015503 - 7458 nt plants 05/06/2011 02/10/2015
    Banana streak UL virus NC_015504 - 7401 nt plants 05/06/2011 02/10/2015
    Banana streak UM virus NC_015505 - 7532 nt plants 05/06/2011 02/10/2015
    Banana streak VN virus NC_007003 strain:Acuminata Vietnam - 7801 nt 1   plants 05/16/2005 07/02/2007
    Banana streak virus NC_008018 isolate:Acuminata Yunnan - 7722 nt 3   plants 05/10/2006 12/08/2008
    Blueberry red ringspot virus NC_003138 - 8303 nt 3   plants 10/11/2001 03/11/2010
    Bougainvillea chlorotic vein banding virus NC_011592 - 8759 nt plants 11/19/2008 11/24/2008
    Cacao swollen shoot virus NC_001574 - 7161 nt 5   plants 08/04/1993 05/22/2010
    Carnation etched ring virus NC_003498 - 7932 nt 1   plants 06/23/1988 02/10/2015
    Cassava vein mosaic virus NC_001648 - 8159 nt 1   plants 07/02/1996 02/10/2015
    Cauliflower mosaic virus NC_001497 - 8024 nt 114   plants 11/03/1982 02/10/2015
    Cestrum yellow leaf curling virus NC_004324 - 8253 nt plants 10/04/2002 11/04/2009
    Citrus yellow mosaic virus NC_003382 - 7559 nt 9   plants 10/25/2001 12/08/2008
    Commelina yellow mottle virus NC_001343 - 7489 nt plants 10/05/1990 07/10/2008
    Cycad leaf necrosis virus NC_011097 - 9205 nt plants 07/31/2008 07/21/2011
    Dahlia mosaic virus NC_018616 - 7916 nt 1   plants 09/20/2012 11/06/2014
    Dioscorea bacilliform virus NC_009010 - 7261 nt 1   plants 02/16/2007 12/08/2008
    Dracaena mottle virus NC_008034 - 7531 nt plants 05/16/2006 07/30/2007
    Eupatorium vein clearing virus NC_010738 - 8463 nt plants 05/21/2008 05/23/2008
    Fig badnavirus 1 NC_017830 isolate:Arkansas 1 - 7140 nt plants 05/04/2012 07/23/2012
    Figwort mosaic virus NC_003554 - 7743 nt plants 08/19/1988 02/10/2015
    Gooseberry vein banding associated virus NC_018105 isolate:RC HC - 7659 nt 4   plants 07/10/2012 07/10/2012
    Grapevine roditis leaf discoloration-associated virus NC_027131 isolate:w4 - 6988 nt plants 05/28/2015 06/02/2015
    Grapevine vein-clearing virus NC_015784 isolate:LBC0903 - 7753 nt 1   plants 07/20/2011 05/16/2013
    Hibiscus bacilliform virus GD1 NC_023485 isolate:GD1 - 7435 nt plants 02/21/2014 02/21/2014
    Horseradish latent virus NC_018858 isolate:ID1 - 7954 nt plants 10/15/2012 11/01/2012
    Kalanchoe top-spotting virus NC_004540 - 7591 nt plants 01/22/2003 03/11/2010
    Lamium leaf distortion virus NC_010737 - 7713 nt plants 05/21/2008 05/23/2008
    Lucky bamboo bacilliform virus NC_009568 - 7522 nt plants 06/15/2007 07/20/2011
    Mirabilis mosaic virus NC_004036 - 7857 nt plants 06/12/2002 11/30/2009
    Mulberry badnavirus 1 NC_026020 isolate:Lebanon34 - 6949 nt plants 01/06/2015 01/10/2015
    Pagoda yellow mosaic associated virus NC_024301 strain:pymav-01 - 7424 nt plants 06/13/2014 06/13/2014
    Peanut chlorotic streak virus NC_001634 isolate:K1 - 8174 nt plants 10/08/1994 11/30/2009
    Pelargonium vein banding virus NC_013262 - 7586 nt plants 09/23/2009 11/27/2012
    Petunia vein clearing virus NC_001839 - 7206 nt 1   plants 10/03/1997 11/30/2009
    Pineapple bacilliform comosus virus NC_014648 - 7543 nt 1   plants 11/10/2010 11/10/2010
    Piper yellow mottle virus NC_022365 strain:ISH-1 - 7562 nt 3   plants 09/19/2013 02/26/2014
    Rice tungro bacilliform virus NC_001914 isolate:Philippines - 8002 nt 12   plants 06/04/1991 02/05/2011
    Rose yellow vein virus NC_020999 strain:RYVV-MN1 - 9314 nt plants 04/15/2013 04/15/2013
    Rubus yellow net virus NC_026238 strain:Baumforth's Seedling A - 7836 nt plants 01/23/2015 01/23/2015
    Rudbeckia flower distortion virus NC_011920 isolate:Minnesota - 8222 nt plants 01/21/2009 02/10/2015
    Soybean Putnam virus NC_018505 - 7757 nt plants 08/28/2012 08/28/2012
    Soybean chlorotic mottle virus NC_001739 - 8178 nt 1   plants 03/02/1990 02/10/2015
    Strawberry vein banding virus NC_001725 - 7876 nt 2   plants 06/01/1996 02/05/2011
    Sugarcane bacilliform IM virus NC_003031 isolate:Ireng Maleng - 7687 nt plants 07/26/2001 02/04/2011
    Sugarcane bacilliform MO virus NC_008017 - 7568 nt plants 05/09/2006 05/22/2007
    Sugarcane bacilliform virus NC_013455 isolate:BataviaD - 7317 nt 2   plants 11/04/2009 12/29/2011
    Sweet potato badnavirus A NC_015655 isolate:Huachano1 - 8082 nt plants 06/15/2011 06/15/2011
    Sweet potato badnavirus B NC_012728 isolate:Huachano1 - 7961 nt plants 05/28/2009 11/27/2012
    Sweet potato caulimo-like virus NC_015328 isolate:Mad1 - 7723 nt plants 04/07/2011 04/22/2011
    Sweet potato vein clearing virus NC_015228 strain:Dom1 - 8837 nt plants 03/21/2011 04/25/2011
    Taro bacilliform CH virus NC_026819 isolate:TaBCHV-1 - 7641 nt 1   plants 04/16/2015 04/16/2015
    Taro bacilliform virus NC_004450 - 7458 nt plants 12/18/2002 07/22/2008
    Tobacco vein clearing virus NC_003378 - 7767 nt plants 11/15/1999 04/28/2010
    Yacon necrotic mottle virus NC_026472 isolate:YV1 - 7661 nt plants 02/17/2015 02/17/2015
Hepadnaviridae
    Bat hepatitis virus NC_020881 isolate:776 - 3230 nt 5   vertebrates 04/01/2013 04/14/2013
    Duck hepatitis B virus NC_001344 isolate:DHBVQCA34 - 3027 nt 43   vertebrates 11/19/1992 02/05/2011
    Ground squirrel hepatitis virus NC_001484 - 3311 nt 1   vertebrates 08/02/1993 11/30/2009
    Hepatitis B virus NC_003977 strain:ayr - 3215 nt 6887   vertebrates, human 06/07/1987 07/09/2015
    Heron hepatitis B virus NC_001486 - 3027 nt 4   vertebrates 08/02/1993 04/03/2009
    Horseshoe bat hepatitis B virus NC_024444 isolate:HBHBV/GB09-403/Rhi_alc/GAB/2009 - 3377 nt vertebrates 06/24/2014 06/24/2014
    Parrot hepatitis B virus NC_016561 isolate:PL - 3048 nt 18   vertebrates 01/13/2012 03/15/2012
    Ross's goose hepatitis B virus
          Ross's goose hepatitis B virus NC_005888 - 3018 nt 6   vertebrates 06/14/2004 12/08/2008
          Snow goose hepatitis B virus NC_005950 isolate:SGHBV1-13 - 3024 nt 6   vertebrates 06/25/2004 12/08/2008
    Roundleaf bat hepatitis B virus NC_024443 isolate:RBHBV/GB09-256/Hip_rub/GAB/2009 - 3368 nt 3   vertebrates 06/24/2014 06/24/2014
    Sheldgoose hepatitis B virus NC_005890 isolate:Ashy-headed sheldgoose hepatitis B virus - 3051 nt 1   vertebrates 06/14/2004 12/01/2009
    Tent-making bat hepatitis B virus NC_024445 isolate:TBHBV/Pan372/Uro_bil/PAN/2010 - 3149 nt 3   vertebrates 06/24/2014 06/24/2014
    Woodchuck hepatitis virus NC_004107 - 3323 nt 18   vertebrates 08/03/1993 11/30/2009
Retroviridae
    Abelson murine leukemia virus NC_001499 - 5894 nt vertebrates 01/21/1998 02/10/2015
    African green monkey simian foamy virus NC_010820 strain:LK-3 - 13111 nt vertebrates 06/06/2008 02/10/2015
    Atlantic salmon swim bladder sarcoma virus NC_007654 - 10305 nt vertebrates 12/19/2005 12/01/2009
    Avian carcinoma virus NC_001402 strain:MH2E21 - 2630 nt vertebrates 04/27/1993 08/11/2006
    Avian endogenous retrovirus EAV-HP NC_005947 - 4302 nt 6   vertebrates 10/11/1999 02/04/2011
    Avian leukosis virus
          Avian leukemia virus NC_015116 isolate:SCDY1 - 7489 nt 69   vertebrates 02/12/2011 04/18/2011
          Avian leukosis virus NC_001408 strain:RSA - 7286 nt 69   vertebrates 04/28/1993 12/08/2008
    Avian myelocytomatosis virus NC_001866 - 3392 nt 1   vertebrates 01/21/1998 11/30/2009
    Baboon endogenous virus strain M7 NC_022517 strain:M7 - 8507 nt 1   vertebrates 11/25/2014 11/30/2014
    Bovine foamy virus NC_001831 - 12002 nt 3   vertebrates 09/03/1997 11/30/2009
    Bovine immunodeficiency virus NC_001413 - 8482 nt 1   vertebrates 04/28/1993 12/08/2008
    Bovine leukemia virus NC_001414 - 8419 nt 12   vertebrates 01/21/1998 12/08/2008
    Caprine arthritis encephalitis virus NC_001463 - 9189 nt 8   vertebrates 08/02/1993 12/08/2008
    Citrus endogenous pararetrovirus NC_023153 - 6996 nt 2   vertebrates 12/23/2013 03/06/2014
    Desmodus rotundus endogenous retrovirus NC_027117 isolate:824 - 10485 nt 1   vertebrates 05/22/2015 05/22/2015
    Enzootic nasal tumour virus of goats NC_004994 - 7448 nt 1   vertebrates 07/08/2003 03/11/2010
    Equine foamy virus NC_002201 - 12035 nt vertebrates 04/20/2000 02/10/2015
    Equine infectious anemia virus NC_001450 - 8359 nt 25   vertebrates 01/21/1998 03/11/2010
    Feline foamy virus NC_001871 isolate:FUV - 10479 nt 7   vertebrates 05/06/1998 12/10/2008
    Feline immunodeficiency virus NC_001482 - 9474 nt 26   vertebrates 08/02/1993 02/10/2015
    Feline leukemia virus NC_001940 strain:FRA - 8448 nt 3   vertebrates 08/15/1998 12/08/2008
    Murine leukemia virus
          Friend murine leukemia virus NC_001362 strain:FB29 - 8323 nt 29   vertebrates 10/29/1991 12/08/2008
          Moloney murine leukemia virus NC_001501 - 8332 nt 29   vertebrates 01/21/1998 02/10/2015
          Murine type C retrovirus NC_001702 - 8135 nt 29   vertebrates 12/12/1995 02/05/2011
          Rauscher murine leukemia virus NC_001819 - 8282 nt 29   vertebrates 07/01/1997 03/11/2010
    Fujinami sarcoma virus NC_001403 - 4788 nt 1   vertebrates 01/21/1998 11/30/2009
    Gibbon ape leukemia virus NC_001885 common:GALV - 8088 nt 1   vertebrates 08/02/1993 11/28/2010
    Primate T-lymphotropic virus 1
          Human T-lymphotropic virus 1 NC_001436 - 8507 nt 24   vertebrates, human 01/21/1998 03/11/2010
          Simian T-lymphotropic virus 1 NC_000858 isolate:Tan90 - 9028 nt 24   vertebrates 06/20/1999 03/11/2010
    Primate T-lymphotropic virus 2
          Human T-lymphotropic virus 2 NC_001488 - 8952 nt 12   vertebrates, human 08/02/1993 11/28/2010
          Simian T-lymphotropic virus 2 NC_001815 strain:PP1664; isolate:STLV-2PP1664 - 8855 nt 12   vertebrates 04/29/1998 12/08/2008
    Human T-lymphotropic virus 4 NC_011800 strain:1863LE - 8791 nt vertebrates 01/05/2009 01/05/2009
    Human endogenous retrovirus K113 NC_022518 - 9472 nt 1   vertebrates, human 09/30/2013 09/30/2013
    Human immunodeficiency virus 1 NC_001802 - 9181 nt 10  1858   vertebrates, human 01/22/1998 06/16/2014
    Human immunodeficiency virus 2 NC_001722 isolate:BEN - 10359 nt 40   vertebrates, human 08/02/1993 04/22/2009
    Jaagsiekte sheep retrovirus NC_001494 - 7462 nt 6   vertebrates 08/02/1993 11/30/2009
    Koala retrovirus NC_021704 isolate:Br2-1CETTG - 8566 nt 7   vertebrates 07/08/2013 07/11/2013
    Macaque simian foamy virus NC_010819 strain:type 1 - 12972 nt 1   vertebrates 08/08/1991 02/10/2015
    Mason-Pfizer monkey virus NC_001550 - 8557 nt 7   vertebrates 01/21/1998 12/08/2008
    Moloney murine sarcoma virus NC_001502 - 5833 nt 3   vertebrates 01/21/1998 02/10/2015
    Mouse mammary tumor virus NC_001503 - 8805 nt 5   vertebrates 01/21/1998 12/08/2008
    Murine osteosarcoma virus NC_001506 - 3811 nt 1   vertebrates 01/21/1998 02/10/2015
    Ovine enzootic nasal tumor virus NC_007015 isolate:sheep TNO28 - 7434 nt 11   vertebrates 04/24/1999 03/10/2011
    Ovine lentivirus NC_001511 - 9256 nt 2   vertebrates 08/02/1993 04/22/2009
    Porcine endogenous retrovirus E NC_003059 - 8072 nt 9   vertebrates 08/12/2001 04/28/2010
    PreXMRV-1 NC_007815 - 8197 nt 10   vertebrates 03/16/2006 07/03/2011
    RD114 retrovirus NC_009889 isolate:SC3C - 8406 nt 1   vertebrates 10/05/2007 10/05/2007
    Reticuloendotheliosis virus NC_006934 strain:HA9901 - 8295 nt 12   vertebrates 04/07/2005 12/01/2009
    Rous sarcoma virus NC_001407 - 9392 nt 5   vertebrates 01/21/1998 12/08/2008
    Simian T-cell lymphotropic virus 6 NC_011546 strain:Cmo8699AB; type:6 - 8913 nt vertebrates 11/12/2008 07/10/2012
    Simian T-lymphotropic virus 3 NC_003323 isolate:CTO-604 - 8918 nt 8   vertebrates 12/19/2001 11/30/2009
    Simian foamy virus NC_001364 - 13246 nt 12   vertebrates 07/05/1994 02/10/2015
    Simian immunodeficiency virus
          Simian immunodeficiency virus NC_001549 isolate:677 - 9623 nt 113   vertebrates 08/03/1993 02/10/2013
          Simian immunodeficiency virus SIV-mnd 2 NC_004455 isolate:SIVmnd-2 - 9518 nt 113   vertebrates 12/20/2002 12/01/2009
    Simian retrovirus 4 NC_014474 strain:SRV4/TEX/2009/V1 - 8126 nt 4   vertebrates 09/08/2010 09/08/2010
    Snakehead retrovirus NC_001724 - 10688 nt vertebrates 05/30/1996 12/01/2009
    Spleen focus-forming virus NC_001500 sub-species:Friend spleen focus-forming virus - 6296 nt vertebrates 08/02/1993 02/10/2015
    Squirrel monkey retrovirus NC_001514 strain:HLB - 8785 nt vertebrates 08/02/1993 08/26/2010
    UR2 sarcoma virus NC_001618 - 3166 nt vertebrates 04/27/1993 02/10/2015
    Visna/maedi virus NC_001452 strain:kv1772 - 9202 nt 7   vertebrates 06/12/1993 12/08/2008
    Walleye dermal sarcoma virus NC_001867 - 12708 nt 2   vertebrates 01/21/1998 12/08/2008
    Woolly monkey sarcoma virus NC_009424 - 5159 nt vertebrates 07/13/1983 03/09/2011
    Xenopus laevis endogenous retrovirus Xen1 NC_010955 isolate:Xen1 - 10207 nt vertebrates 12/23/2002 02/04/2011
    Y73 sarcoma virus NC_008094 strain:PR2257/16 - 5188 nt 1   vertebrates 06/07/2006 12/08/2008
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