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Influenza Virus Resource presents data obtained from the NIAID Influenza Genome Sequencing Project as well as from GenBank, combined with tools for flu sequence analysis, annotation and submission to GenBank. In addition, it provides links to other resources that contain flu sequences, publications and general information about flu viruses.

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GenBank sequences from pandemic (H1N1) 2009 viruses

New!This webpage is no longer updated with new GenBank sequences from pandemic (H1N1) 2009 viruses. Such data are available in the NCBI Influenza Virus Sequence Database by defining the GenBank release date. For example, pandemic (H1N1) 2009 virus sequences released in GenBank between June 30 and July 6, 2010 can be retrieved using this database query.

All submitted influenza sequences are available in GenBank as soon as they are processed. The pandemic (H1N1) 2009 virus sequences are listed on this page and are available for BLAST searching here, and are also available in the NCBI Influenza Virus Sequence Database, and can be retrieved with sequences from other influenza viruses for further analyses using tools integrated to the database. A complete list of GenBank sequences for these viruses can also be obtained through a special genome project page or directly from here.

The following pandemic (H1N1) 2009 virus sequences were submitted to NCBI and are available in GenBank in 2010. Sequences released in 2009 are listed here.

July 06, 2010, 7 submitted by WHO Collaborating Centre for Reference and Research on Influenza, Australia; 1 by Heinrich-Pette-Institute of Virology, Germany; 26 by National Centre for Foreign Animal Disease, Canada:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Hamburg/NY1580/2009(H1N1))
GU480807
Influenza A virus
(A/Perth/260/2009(H1N1))
HM624086
Influenza A virus
(A/Perth/262/2009(H1N1))
HM624083
Influenza A virus
(A/Perth/265/2009(H1N1))
HM624082
Influenza A virus
(A/Perth/267/2009(H1N1))
HM624085 HM624081
Influenza A virus
(A/Perth/268/2009(H1N1))
HM624087 HM624084
Influenza A virus
(A/turkey/Ontario/FAV110-4/2009(H1N1))
HM370967 HM370968 HM370969
Influenza A virus
(A/turkey/Ontario/FAV110/2009(H1N1))
HM370957
HM370965
HM370958
HM450133
HM370959
HM370966
HM370960 HM370961 HM370962 HM370963
HM370970
HM370964
HM370971
Influenza A virus
(A/turkey/Ontario/FAV114-17/2009(H1N1))
HM370972 HM370973 HM370974 HM370975 HM370976 HM370977 HM370978 HM370979
Influenza A virus
(A/turkey/Ontario/FAV117-1C/2009(H1N1))
HM450134 HM450135

June 29, 2010, 1 submitted by University of Gdansk, Poland; 1 by Hospital Charles Nicolle, Tunisia:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Gdansk/037/2009(H1N1))
HM590431
Influenza A virus
(A/Tunisia/1064/2010(H1N1))
HM590676

June 28, 2010, 192 submitted by JCVI:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Guam/NHRC0001/2009(H1N1))
CY065935 CY065934 CY065933 CY065928 CY065931 CY065930 CY065929 CY065932
Influenza A virus
(A/Guam/NHRC0002/2009(H1N1))
CY065943 CY065942 CY065941 CY065936 CY065939 CY065938 CY065937 CY065940
Influenza A virus
(A/Guam/NHRC0003/2009(H1N1))
CY065951 CY065950 CY065949 CY065944 CY065947 CY065946 CY065945 CY065948
Influenza A virus
(A/Japan/NHRC0001/2009(H1N1))
CY065959 CY065958 CY065957 CY065952 CY065955 CY065954 CY065953 CY065956
Influenza A virus
(A/Japan/NHRC0002/2009(H1N1))
CY065967 CY065966 CY065965 CY065960 CY065963 CY065962 CY065961 CY065964
Influenza A virus
(A/Netherlands/1039/2009(H1N1))
CY065799 CY065798 CY065797 CY065792 CY065795 CY065794 CY065793 CY065796
Influenza A virus
(A/Netherlands/1083/2009(H1N1))
CY065911 CY065910 CY065909 CY065904 CY065907 CY065906 CY065905 CY065908
Influenza A virus
(A/Netherlands/1084/2009(H1N1))
CY065919 CY065918 CY065917 CY065912 CY065915 CY065914 CY065913 CY065916
Influenza A virus
(A/Netherlands/1093/2009(H1N1))
CY065887 CY065886 CY065885 CY065880 CY065883 CY065882 CY065881 CY065884
Influenza A virus
(A/Netherlands/1324/2009(H1N1))
CY065855 CY065854 CY065853 CY065848 CY065851 CY065850 CY065849 CY065852
Influenza A virus
(A/Netherlands/1493b/2009(H1N1))
CY065871 CY065870 CY065869 CY065864 CY065867 CY065866 CY065865 CY065868
Influenza A virus
(A/Netherlands/1715b/2009(H1N1))
CY065815 CY065814 CY065813 CY065808 CY065811 CY065810 CY065809 CY065812
Influenza A virus
(A/Netherlands/2229/2009(H1N1))
CY065863 CY065862 CY065861 CY065856 CY065859 CY065858 CY065857 CY065860
Influenza A virus
(A/Netherlands/2243/2009(H1N1))
CY065831 CY065830 CY065829 CY065824 CY065827 CY065826 CY065825 CY065828
Influenza A virus
(A/Netherlands/2290/2009(H1N1))
CY065927 CY065926 CY065925 CY065920 CY065923 CY065922 CY065921 CY065924
Influenza A virus
(A/Netherlands/2442b/2009(H1N1))
CY065823 CY065822 CY065821 CY065816 CY065819 CY065818 CY065817 CY065820
Influenza A virus
(A/Netherlands/2445b/2009(H1N1))
CY065807 CY065806 CY065805 CY065800 CY065803 CY065802* CY065801 CY065804
Influenza A virus
(A/Netherlands/2457b/2009(H1N1))
CY065839 CY065838 CY065837 CY065832 CY065835 CY065834 CY065833 CY065836
Influenza A virus
(A/Netherlands/2629/2009(H1N1))
CY065791 CY065790 CY065789 CY065784 CY065787 CY065786 CY065785 CY065788
Influenza A virus
(A/Netherlands/2631b/2009(H1N1))
CY065879 CY065878 CY065877 CY065872 CY065875 CY065874 CY065873 CY065876
Influenza A virus
(A/Netherlands/2635b/2009(H1N1))
CY065783 CY065782 CY065781 CY065776 CY065779 CY065778 CY065777 CY065780
Influenza A virus
(A/Netherlands/2636/2009(H1N1))
CY065847 CY065846 CY065845 CY065840 CY065843 CY065842 CY065841 CY065844
Influenza A virus
(A/Netherlands/2815/2009(H1N1))
CY065895 CY065894 CY065893 CY065888 CY065891 CY065890 CY065889 CY065892
Influenza A virus
(A/Netherlands/2822/2009(H1N1))
CY065903 CY065902 CY065901 CY065896 CY065899 CY065898 CY065897 CY065900
* This sequence has the H274Y mutation that confers resistance to Oseltamivir.

June 26, 2010, 8 submitted by Institut Pasteur of Shanghai, China; 16 by British Columbia Centre for Disease Control, Canada:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/British Columbia/GFA0401/2009(H1N1))
CY065759 CY065760 CY065761 CY065762 CY065763 CY065764 CY065765 CY065766
Influenza A virus
(A/Canada/GFA0402/2009(H1N1))
CY065767 CY065768 CY065769 CY065770 CY065771 CY065772 CY065773 CY065774
Influenza A virus
(A/Shanghai/P1/2009(H1N1))
AB539736 AB539737 AB539738 AB539739 AB539740 AB539741 AB539742 AB539743

June 23, 2010, 18 submitted by National Influenza Centre, Iran:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Iran/14068/2009(H1N1))
HM581923 HM581922
Influenza A virus
(A/Iran/14089/2009(H1N1))
HM581921 HM581920
Influenza A virus
(A/Iran/1519/2009(H1N1))
HM581925 HM581924
Influenza A virus
(A/Iran/15583/2009(H1N1))
HM581919 HM581918
Influenza A virus
(A/Iran/16245/2009(H1N1))
HM581917 HM581916
Influenza A virus
(A/Iran/16273/2009(H1N1))
HM581915 HM581914
Influenza A virus
(A/Iran/16677/2009(H1N1))
HM581913 HM581912
Influenza A virus
(A/Iran/16743/2009(H1N1))
HM581911 HM581910
Influenza A virus
(A/Iran/16751/2009(H1N1))
HM581909
Influenza A virus
(A/Iran/20001/2009(H1N1))
HM581908

June 22, 2010, 50 submitted by CEMIC University Hospital, Argentina:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Argentina/07-09GP/2009(H1N1))
HM569666 HM569665 HM569664 HM569659 HM569662 HM569661 HM569660 HM569663
Influenza A virus
(A/Argentina/07AR/2009(H1N1))
HM569699 HM569704
Influenza A virus
(A/Argentina/08AR/2009(H1N1))
HM569674 HM569673 HM569672 HM569667 HM569670 HM569669 HM569668 HM569671
Influenza A virus
(A/Argentina/19464/2009(H1N1))
HM569703 HM569708
Influenza A virus
(A/Argentina/19527/2009(H1N1))
HM569682 HM569681 HM569680 HM569675 HM569678 HM569677 HM569676 HM569679
Influenza A virus
(A/Argentina/19531/2009(H1N1))
HM569701 HM569706
Influenza A virus
(A/Argentina/19618/2009(H1N1))
HM569690 HM569689 HM569688 HM569683 HM569686 HM569685 HM569684 HM569687
Influenza A virus
(A/Argentina/19656/2009(H1N1))
HM569698 HM569697 HM569696 HM569691 HM569694 HM569693 HM569692 HM569695
Influenza A virus
(A/Argentina/19659/2009(H1N1))
HM569702 HM569707
Influenza A virus
(A/Argentina/19911/2009(H1N1))
HM569700 HM569705

June 21, 2010, 15 submitted by Shandong CDC, China; 152 by JCVI:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/California/VRDL6/2010(H1N1))
CY064994 CY064993 CY064992 CY064987 CY064990 CY064989 CY064988 CY064991
Influenza A virus
(A/Netherlands/1064b/2009(H1N1))
CY065130 CY065129 CY065128 CY065123 CY065126 CY065125 CY065124 CY065127
Influenza A virus
(A/Netherlands/2143/2009(H1N1))
CY065138 CY065137 CY065136 CY065131 CY065134 CY065133 CY065132 CY065135
Influenza A virus
(A/Netherlands/2464b/2009(H1N1))
CY065122 CY065121 CY065120 CY065115 CY065118 CY065117 CY065116 CY065119
Influenza A virus
(A/New York/3681/2010(H1N1))
CY065002 CY065001 CY065000 CY064995 CY064998 CY064997 CY064996 CY064999
Influenza A virus
(A/New York/3682/2010(H1N1))
CY065010 CY065009 CY065008 CY065003 CY065006 CY065005 CY065004 CY065007
Influenza A virus
(A/New York/3683/2010(H1N1))
CY065018 CY065017 CY065016 CY065011 CY065014 CY065013 CY065012 CY065015
Influenza A virus
(A/New York/3834/2010(H1N1))
CY065026 CY065025 CY065024 CY065019 CY065022 CY065021 CY065020 CY065023
Influenza A virus
(A/New York/3835/2010(H1N1))
CY065034 CY065033 CY065032 CY065027 CY065030 CY065029 CY065028 CY065031
Influenza A virus
(A/New York/3866/2010(H1N1))
CY065042 CY065041 CY065040 CY065035 CY065038 CY065037 CY065036 CY065039
Influenza A virus
(A/New York/4294/2010(H1N1))
CY065050 CY065049 CY065048 CY065043 CY065046 CY065045 CY065044 CY065047
Influenza A virus
(A/New York/4662/2010(H1N1))
CY065058 CY065057 CY065056 CY065051 CY065054 CY065053 CY065052 CY065055
Influenza A virus
(A/New York/6530/2010(H1N1))
CY065066 CY065065 CY065064 CY065059 CY065062 CY065061 CY065060 CY065063
Influenza A virus
(A/New York/7420/2010(H1N1))
CY065074 CY065073 CY065072 CY065067 CY065070 CY065069 CY065068 CY065071
Influenza A virus
(A/New York/7421/2009(H1N1))
CY065082 CY065081 CY065080 CY065075 CY065078 CY065077 CY065076 CY065079
Influenza A virus
(A/New York/7424/2009(H1N1))
CY065090 CY065089 CY065088 CY065083 CY065086 CY065085 CY065084 CY065087
Influenza A virus
(A/New York/7425/2009(H1N1))
CY065098 CY065097 CY065096 CY065091 CY065094 CY065093 CY065092 CY065095
Influenza A virus
(A/New York/7426/2009(H1N1))
CY065106 CY065105 CY065104 CY065099 CY065102 CY065101 CY065100 CY065103
Influenza A virus
(A/New York/7480/2010(H1N1))
CY065114 CY065113 CY065112 CY065107 CY065110 CY065109 CY065108 CY065111
Influenza A virus
(A/Orenburg/IIV-13/2010(H1N1))
HM569737 HM569738 HM569739 HM569740 HM569741 HM569742 HM569743 HM569744
Influenza A virus
(A/Shandong-Qufu/SWL331/2009(H1N1))
CY064925
Influenza A virus
(A/Shandong-Qufu/SWL339/2009(H1N1))
CY064926
Influenza A virus
(A/Shandong-Rencheng/SWL311/2009(H1N1))
CY064931
Influenza A virus
(A/Shandong-Rencheng/SWL312/2009(H1N1))
CY064932
Influenza A virus
(A/Shandong-Shizhong/SWL1536/2009(H1N1))
CY064933
Influenza A virus
(A/Shandong-Shizhong/SWL1603/2009(H1N1))
CY064934
Influenza A virus
(A/Shandong-Shizhong/SWL1604/2009(H1N1))
CY064935
Influenza A virus
(A/Shandong-Shizhong/SWL1828/2009(H1N1))
CY064924
Influenza A virus
(A/Shandong-Shizhong/SWL24/2010(H1N1))
CY064936
Influenza A virus
(A/Shandong-Weishan/SWL311/2009(H1N1))
CY064930
Influenza A virus
(A/Shandong-Weishan/SWL36/2009(H1N1))
CY064928
Influenza A virus
(A/Shandong-Weishan/SWL39/2009(H1N1))
CY064929
Influenza A virus
(A/Shandong-Wenshan/SWL42/2010(H1N1))
CY064922
Influenza A virus
(A/Shandong-Wenshan/SWL47/2009(H1N1))
CY064927
Influenza A virus
(A/Shandong-Zoucheng/SWL44/2009(H1N1))
CY064923

June 18, 2010, 2 submitted by Kawasaki Medical School, Japan; 2 by Istituto Nazionale Malattie Infettive 'L. Spallanzani', Italy:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Chiba/1001/2009(H1N1))
AB568300
Influenza A virus
(A/Kurashiki/3/2009(H1N1))
AB568301
Influenza A virus
(A/Rome/707/2009(H1N1))
CY064937
Influenza A virus
(A/Rome/708/2009(H1N1))
CY064938

June 16, 2010, 8 submitted by JCVI; 19 by Istituto Nazionale Malattie Infettive 'L. Spallanzani', Italy:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Boston/136/2009(H1N1))
CY064902 CY064901 CY064900 CY064895 CY064898 CY064897 CY064896 CY064899
Influenza A virus
(A/Rome/688/2009(H1N1))
CY064903
Influenza A virus
(A/Rome/689/2009(H1N1))
CY064904
Influenza A virus
(A/Rome/690/2009(H1N1))
CY064905
Influenza A virus
(A/Rome/691/2009(H1N1))
CY064906
Influenza A virus
(A/Rome/692/2009(H1N1))
CY064907
Influenza A virus
(A/Rome/693/2009(H1N1))
CY064908
Influenza A virus
(A/Rome/694/2009(H1N1))
CY064909
Influenza A virus
(A/Rome/695/2009(H1N1))
CY064910
Influenza A virus
(A/Rome/696/2009(H1N1))
CY064911
Influenza A virus
(A/Rome/697/2009(H1N1))
CY064912
Influenza A virus
(A/Rome/698/2009(H1N1))
CY064913
Influenza A virus
(A/Rome/699/2009(H1N1))
CY064914
Influenza A virus
(A/Rome/700/2009(H1N1))
CY064915
Influenza A virus
(A/Rome/701/2009(H1N1))
CY064920
Influenza A virus
(A/Rome/702/2009(H1N1))
CY064921
Influenza A virus
(A/Rome/703/2009(H1N1))
CY064917
Influenza A virus
(A/Rome/704/2009(H1N1))
CY064916
Influenza A virus
(A/Rome/705/2009(H1N1))
CY064918
Influenza A virus
(A/Rome/706/2009(H1N1))
CY064919

June 15, 2010, 18 submitted by Henan centre for disease control and prevention, China; 1 by Hospital Clinic, Spain:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Baofeng/SWL537/2009(H1N1))
CY064400
Influenza A virus
(A/Dongcheng/SWL45/2009(H1N1))
CY064393
Influenza A virus
(A/Hualong/SWL1313/2009(H1N1))
CY064397
Influenza A virus
(A/Hualong/SWL1324/2009(H1N1))
CY064398
Influenza A virus
(A/Hualong/SWL1334/2009(H1N1))
CY064399
Influenza A virus
(A/Hualong/SWL1347/2009(H1N1))
CY064403
Influenza A virus
(A/Jinshui/SWL54/2009(H1N1))
CY064392
Influenza A virus
(A/Qingfeng/SWL43/2009(H1N1))
CY064391
Influenza A virus
(A/Ruyang/SWL1606/2009(H1N1))
CY064394
Influenza A virus
(A/Ruzhou/SWL564/2009(H1N1))
CY064405
Influenza A virus
(A/Valencia/HLF2/2009(H1N1))
CY064798*
Influenza A virus
(A/Weidong/SWL5165/2009(H1N1))
CY064406
Influenza A virus
(A/Weidu/SWL1353/2009(H1N1))
CY064404
Influenza A virus
(A/Weidu/SWL1379/2009(H1N1))
CY064407
Influenza A virus
(A/Weidu/SWL51/2009(H1N1))
CY064390
Influenza A virus
(A/Xigong/SWL11045/2009(H1N1))
CY064402
Influenza A virus
(A/Xuchang/SWL48/2009(H1N1))
CY064395
Influenza A virus
(A/Xuchang/SWL49/2009(H1N1))
CY064396
Influenza A virus
(A/Zhongyuan/SWL1643/2009(H1N1))
CY064401
* This sequence has the H274Y mutation that confers resistance to Oseltamivir.

June 08, 2010, 38 submitted by Center for Disease Control and Prevention of Guangdong Province, China; 328 by JCVI; 8 by Guangzhou Eighth People's Hospital, China:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Barcelona/INS190/2009(H1N1))
CY064787 CY064786 CY064785 CY064780 CY064783 CY064782 CY064781 CY064784
Influenza A virus
(A/Berlin/INS170/2009(H1N1))
CY064779 CY064778 CY064777 CY064772 CY064775 CY064774 CY064773 CY064776
Influenza A virus
(A/Boston/103/2009(H1N1))
CY064475 CY064474 CY064473 CY064468 CY064471 CY064470 CY064469 CY064472
Influenza A virus
(A/Boston/106/2009(H1N1))
CY064483 CY064482 CY064481 CY064476 CY064479 CY064478 CY064477 CY064480
Influenza A virus
(A/Boston/108/2009(H1N1))
CY064491 CY064490 CY064489 CY064484 CY064487 CY064486 CY064485 CY064488
Influenza A virus
(A/Boston/109/2009(H1N1))
CY064499 CY064498 CY064497 CY064492 CY064495 CY064494 CY064493 CY064496
Influenza A virus
(A/Boston/115/2009(H1N1))
CY064507 CY064506 CY064505 CY064500 CY064503 CY064502 CY064501 CY064504
Influenza A virus
(A/Boston/116/2009(H1N1))
CY064515 CY064514 CY064513 CY064508 CY064511 CY064510 CY064509 CY064512
Influenza A virus
(A/Boston/117/2009(H1N1))
CY064523 CY064522 CY064521 CY064516 CY064519 CY064518 CY064517 CY064520
Influenza A virus
(A/Boston/118/2009(H1N1))
CY064531 CY064530 CY064529 CY064524 CY064527 CY064526 CY064525 CY064528
Influenza A virus
(A/Boston/120/2009(H1N1))
CY064539 CY064538 CY064537 CY064532 CY064535 CY064534 CY064533 CY064536
Influenza A virus
(A/Boston/121/2009(H1N1))
CY064547 CY064546 CY064545 CY064540 CY064543 CY064542 CY064541 CY064544
Influenza A virus
(A/Boston/122/2009(H1N1))
CY064555 CY064554 CY064553 CY064548 CY064551 CY064550 CY064549 CY064552
Influenza A virus
(A/Boston/123/2009(H1N1))
CY064563 CY064562 CY064561 CY064556 CY064559 CY064558 CY064557 CY064560
Influenza A virus
(A/Boston/124/2009(H1N1))
CY064571 CY064570 CY064569 CY064564 CY064567 CY064566 CY064565 CY064568
Influenza A virus
(A/Boston/125/2009(H1N1))
CY064579 CY064578 CY064577 CY064572 CY064575 CY064574 CY064573 CY064576
Influenza A virus
(A/Boston/126/2009(H1N1))
CY064587 CY064586 CY064585 CY064580 CY064583 CY064582 CY064581 CY064584
Influenza A virus
(A/Boston/127/2009(H1N1))
CY064595 CY064594 CY064593 CY064588 CY064591 CY064590 CY064589 CY064592
Influenza A virus
(A/Boston/129/2009(H1N1))
CY064603 CY064602 CY064601 CY064596 CY064599 CY064598 CY064597 CY064600
Influenza A virus
(A/Boston/130/2009(H1N1))
CY064611 CY064610 CY064609 CY064604 CY064607 CY064606 CY064605 CY064608
Influenza A virus
(A/Boston/131/2009(H1N1))
CY064619 CY064618 CY064617 CY064612 CY064615 CY064614 CY064613 CY064616
Influenza A virus
(A/Boston/132/2009(H1N1))
CY064627 CY064626 CY064625 CY064620 CY064623 CY064622 CY064621 CY064624
Influenza A virus
(A/Boston/133/2009(H1N1))
CY064635 CY064634 CY064633 CY064628 CY064631 CY064630 CY064629 CY064632
Influenza A virus
(A/Boston/134/2009(H1N1))
CY064643 CY064642 CY064641 CY064636 CY064639 CY064638 CY064637 CY064640
Influenza A virus
(A/Boston/135/2009(H1N1))
CY064651 CY064650 CY064649 CY064644 CY064647 CY064646 CY064645 CY064648
Influenza A virus
(A/Boston/137/2009(H1N1))
CY064659 CY064658 CY064657 CY064652 CY064655 CY064654 CY064653 CY064656
Influenza A virus
(A/Boston/138/2009(H1N1))
CY064667 CY064666 CY064665 CY064660 CY064663 CY064662 CY064661 CY064664
Influenza A virus
(A/Boston/140/2009(H1N1))
CY064675 CY064674 CY064673 CY064668 CY064671 CY064670 CY064669 CY064672
Influenza A virus
(A/Boston/141/2009(H1N1))
CY064683 CY064682 CY064681 CY064676 CY064679 CY064678 CY064677 CY064680
Influenza A virus
(A/Boston/142/2009(H1N1))
CY064691 CY064690 CY064689 CY064684 CY064687 CY064686 CY064685 CY064688
Influenza A virus
(A/Boston/143/2009(H1N1))
CY064699 CY064698 CY064697 CY064692 CY064695 CY064694 CY064693 CY064696
Influenza A virus
(A/Boston/96/2009(H1N1))
CY064467 CY064466 CY064465 CY064460 CY064463 CY064462 CY064461 CY064464
Influenza A virus
(A/District of Columbia/INS32/2009(H1N1))
CY064771 CY064770 CY064769 CY064764 CY064767 CY064766 CY064765 CY064768
Influenza A virus
(A/Guangdong/1069/2009(H1N1))
CY064422 CY064423
Influenza A virus
(A/Guangdong/1070/2009(H1N1))
CY064424 CY064425
Influenza A virus
(A/Guangdong/1071/2009(H1N1))
CY064426 CY064427
Influenza A virus
(A/Guangdong/1075/2009(H1N1))
CY064428 CY064429
Influenza A virus
(A/Guangdong/1078/2009(H1N1))
CY064430 CY064431
Influenza A virus
(A/Guangdong/1083/2009(H1N1))
CY064432 CY064433
Influenza A virus
(A/Guangdong/1240/2009(H1N1))
CY064434 CY064435
Influenza A virus
(A/Guangdong/1241/2009(H1N1))
CY064436 CY064437
Influenza A virus
(A/Guangdong/1249/2009(H1N1))
CY064438 CY064439
Influenza A virus
(A/Guangdong/1250/2009(H1N1))
CY064440 CY064441
Influenza A virus
(A/Guangdong/1252/2009(H1N1))
CY064442 CY064443
Influenza A virus
(A/Guangdong/1260/2009(H1N1))
CY064444 CY064445
Influenza A virus
(A/Guangdong/1262/2009(H1N1))
CY064446 CY064447
Influenza A virus
(A/Guangdong/1266/2009(H1N1))
CY064448 CY064449
Influenza A virus
(A/Guangdong/1270/2009(H1N1))
CY064450 CY064451
Influenza A virus
(A/Guangdong/1271/2009(H1N1))
CY064452 CY064453
Influenza A virus
(A/Guangdong/1275/2009(H1N1))
CY064454 CY064455
Influenza A virus
(A/Guangdong/1738/2009(H1N1))
CY064456 CY064457
Influenza A virus
(A/Guangdong/5024/2009(H1N1))
CY064458 CY064459
Influenza A virus
(A/Guangdong/SB1/2009(H1N1))
CY064788 CY064789 CY064790 CY064791 CY064792 CY064793 CY064794 CY064795
Influenza A virus
(A/Mexico City/019/2009(H1N1))
CY064707 CY064706 CY064705 CY064700 CY064703 CY064702 CY064701 CY064704
Influenza A virus
(A/Mexico City/020/2009(H1N1))
CY064715 CY064714 CY064713 CY064708 CY064711 CY064710 CY064709 CY064712
Influenza A virus
(A/Mexico City/021/2009(H1N1))
CY064723 CY064722 CY064721 CY064716 CY064719 CY064718 CY064717 CY064720
Influenza A virus
(A/Mexico City/022/2009(H1N1))
CY064731 CY064730 CY064729 CY064724 CY064727 CY064726 CY064725 CY064728
Influenza A virus
(A/Mexico City/023/2009(H1N1))
CY064739 CY064738 CY064737 CY064732 CY064735 CY064734 CY064733 CY064736
Influenza A virus
(A/Mexico City/024/2009(H1N1))
CY064747 CY064746 CY064745 CY064740 CY064743 CY064742 CY064741 CY064744
Influenza A virus
(A/Mexico City/025/2009(H1N1))
CY064755 CY064754 CY064753 CY064748 CY064751 CY064750 CY064749 CY064752
Influenza A virus
(A/Mexico City/026/2009(H1N1))
CY064763 CY064762 CY064761 CY064756 CY064759 CY064758 CY064757 CY064760

June 04, 2010, 14 submitted by CIATEJ, Mexico:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Mexico City/CIA10/2009(H1N1))
CY064408 CY064409 CY064410 CY064411 CY064412* CY064413 CY064414
Influenza A virus
(A/Mexico City/CIA11/2009(H1N1))
CY064415 CY064416 CY064417 CY064418 CY064419 CY064420 CY064421
* This sequence has the H274Y mutation that confers resistance to Oseltamivir.

June 01, 2010, 121 submitted by Central Research Institute of Epidemiology, Russia:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Arkhangelsk/CRIE-GNY/2009(H1N1))
HM189317 HM189318 HM189319 HM189320 HM189321 HM189322 HM189323 HM189324
Influenza A virus
(A/Astrakhan/CRIE-CHRM/2009(H1N1))
HM189374 HM189342
Influenza A virus
(A/Astrakhan/CRIE-PIV/2009(H1N1))
HM189379
Influenza A virus
(A/Belgorod/CRIE-KLG/2009(H1N1))
HM189402
Influenza A virus
(A/Chelyabinsk/CRIE-KAI/2009(H1N1))
HM189385
Influenza A virus
(A/Chita/CRIE-8/2009(H1N1))
HM189309 HM189310 HM189311 HM189312 HM189313 HM189314 HM189315 HM189316
Influenza A virus
(A/Ivanovo/CRIE-AIV/2009(H1N1))
HM189418
Influenza A virus
(A/Ivanovo/CRIE-AMV/2009(H1N1))
HM189422 HM189328
Influenza A virus
(A/Ivanovo/CRIE-BOV/2009(H1N1))
HM189417
Influenza A virus
(A/Ivanovo/CRIE-KOE/2009(H1N1))
HM189404 HM189340
Influenza A virus
(A/Ivanovo/CRIE-RNA/2009(H1N1))
HM189376 HM189344
Influenza A virus
(A/Ivanovo/CRIE-STV1/2009(H1N1))
HM189387
Influenza A virus
(A/Kaliningrad/CRIE-DA/2009(H1N1))
HM189366
Influenza A virus
(A/Kaliningrad/CRIE-KG/2009(H1N1))
HM189365
Influenza A virus
(A/Kaliningrad/CRIE-MA/2009(H1N1))
HM189363
Influenza A virus
(A/Kaliningrad/CRIE-SHD/2009(H1N1))
HM189364
Influenza A virus
(A/Kaliningrad/CRIE-ZD/2009(H1N1))
HM189362
Influenza A virus
(A/Kaluga/CRIE-INV/2009(H1N1))
HM189419 HM189332
Influenza A virus
(A/Lipetsk/CRIE-BVV/2009(H1N1))
HM189349 HM189350 HM189351 HM189352 HM189353 HM189354 HM189355 HM189356
Influenza A virus
(A/Moscow oblast/CRIE-4142/2009(H1N1))
HM189416 HM189330
Influenza A virus
(A/Moscow oblast/CRIE-4145/2009(H1N1))
HM189415 HM189331
Influenza A virus
(A/Moscow oblast/CRIE-BGI/2009(H1N1))
HM189423
Influenza A virus
(A/Moscow oblast/CRIE-DEI/2009(H1N1))
HM189411 HM189346
Influenza A virus
(A/Moscow oblast/CRIE-IVD/2009(H1N1))
HM189389
Influenza A virus
(A/Moscow oblast/CRIE-KMA/2009(H1N1))
HM189398 HM189327
Influenza A virus
(A/Moscow oblast/CRIE-LVS/2009(H1N1))
HM189413
Influenza A virus
(A/Moscow oblast/CRIE-OAM/2009(H1N1))
HM189410 HM189345
Influenza A virus
(A/Moscow oblast/CRIE-RMA/2009(H1N1))
HM189429
Influenza A virus
(A/Moscow oblast/CRIE-SKV/2009(H1N1))
HM189407
Influenza A virus
(A/Moscow oblast/CRIE-STV/2009(H1N1))
HM189386 HM189333
Influenza A virus
(A/Moscow oblast/CRIE-ZNF/2009(H1N1))
HM189375 HM189348
Influenza A virus
(A/Moscow/CRIE-BVA/2009(H1N1))
HM189373 HM189336
Influenza A virus
(A/Moscow/CRIE-CHSN/2009(H1N1))
HM189396 HM189339
Influenza A virus
(A/Moscow/CRIE-GSE/2009(H1N1))
HM189377
Influenza A virus
(A/Moscow/CRIE-ION/2009(H1N1))
HM189367 HM189337
Influenza A virus
(A/Moscow/CRIE-PTD/2009(H1N1))
HM189426
Influenza A virus
(A/Moscow/CRIE-S/2009(H1N1))
HM189400
Influenza A virus
(A/Moscow/CRIE-TRV/2009(H1N1))
HM189427
Influenza A virus
(A/Moscow/CRIE-TYD/2009(H1N1))
HM189408
Influenza A virus
(A/Moscow/CRIE-Th/2009(H1N1))
HM189369
Influenza A virus
(A/Moscowv/CRIE-MOV/2009(H1N1))
HM189428
Influenza A virus
(A/Murmansk/CRIE-DII/2009(H1N1))
HM189392
Influenza A virus
(A/Murmansk/CRIE-JAS/2009(H1N1))
HM189395
Influenza A virus
(A/Murmansk/CRIE-LKA/2009(H1N1))
HM189394
Influenza A virus
(A/Murmansk/CRIE-PAI/2009(H1N1))
HM189393
Influenza A virus
(A/Murmansk/CRIE-PVR/2009(H1N1))
HM189399
Influenza A virus
(A/Murmansk/CRIE-SLV/2009(H1N1))
HM189391
Influenza A virus
(A/Nizhni Novgorod/CRIE-KDAn/2009(H1N1))
HM189425
Influenza A virus
(A/Nizhni Novgorod/CRIE-MEV/2009(H1N1))
HM189380
Influenza A virus
(A/Orel/CRIE-AAP/2009(H1N1))
HM189406
Influenza A virus
(A/Orel/CRIE-KAI1/2009(H1N1))
HM189357
Influenza A virus
(A/Orenburg/CRIE-VNV/2009(H1N1))
HM189370 HM189338
Influenza A virus
(A/Perm/CRIE-PMI/2009(H1N1))
HM189412 HM189326
Influenza A virus
(A/Perm/CRIE-SHEO/2009(H1N1))
HM189382
Influenza A virus
(A/Perm/CRIE-ZTS/2009(H1N1))
HM189390 HM189325
Influenza A virus
(A/Rostov oblast/CRIE-SHAV/2009(H1N1))
HM189384
Influenza A virus
(A/Salehard/CRIE-HSN/2009(H1N1))
HM189372
Influenza A virus
(A/Saratov/CRIE-MDA/2009(H1N1))
HM189424
Influenza A virus
(A/St.Petersburg oblast/CRIE-SEV/2009(H1N1))
HM189388
Influenza A virus
(A/St.Petersburg/CRIE-PHP/2009(H1N1))
HM189420
Influenza A virus
(A/St.Petersburg/CRIE-VMN/2009(H1N1))
HM189378
Influenza A virus
(A/Stavropol/CRIE-BLV/2009(H1N1))
HM189403 HM189341
Influenza A virus
(A/Tambov/CRIE-FOS/2009(H1N1))
HM189371 HM189343
Influenza A virus
(A/Tambov/CRIE-LLA/2009(H1N1))
HM189409 HM189347
Influenza A virus
(A/Tambov/CRIE-SPN/2009(H1N1))
HM189383
Influenza A virus
(A/Tumen/CRIE-KIN/2009(H1N1))
HM189381
Influenza A virus
(A/Tver/CRIE-BVN/2009(H1N1))
HM189401
Influenza A virus
(A/Tver/CRIE-ZC/2009(H1N1))
HM189368
Influenza A virus
(A/Ulyanovsk/CRIE-BAA/2009(H1N1))
HM189405 HM189329
Influenza A virus
(A/Ulyanovsk/CRIE-KLA/2009(H1N1))
HM189421 HM189335
Influenza A virus
(A/Ulyanovsk/CRIE-OAA/2009(H1N1))
HM189397
Influenza A virus
(A/Ulyanovsk/CRIE-SHTA/2009(H1N1))
HM189414
Influenza A virus
(A/Volgograd/CRIE-VAA/2009(H1N1))
HM189361
Influenza A virus
(A/Yakutsk/CRIE-EAV/2009(H1N1))
HM189358
Influenza A virus
(A/Yaroslavl/CRIE-CHMV/2009(H1N1))
HM189360 HM189334
Influenza A virus
(A/Yaroslavl/CRIE-KMP/2009(H1N1))
HM189359

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