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Influenza Virus Resource presents data obtained from the NIAID Influenza Genome Sequencing Project as well as from GenBank, combined with tools for flu sequence analysis, annotation and submission to GenBank. In addition, it provides links to other resources that contain flu sequences, publications and general information about flu viruses.

Read more about: This resource | Flu database | Flu sequence submission to GenBank | NIAID Influenza Sequencing Project | Influenza virus biology
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GenBank sequences from pandemic (H1N1) 2009 viruses

All submitted influenza sequences are available in GenBank as soon as they are processed. The pandemic (H1N1) 2009 virus sequences are listed on this page and are available for BLAST searching here, and are also available in the NCBI Influenza Virus Sequence Database, and can be retrieved with sequences from other influenza viruses for further analyses using tools integrated to the database. Go to a tutorial for instructions downloading these sequences. A complete list of GenBank sequences for these viruses can also be obtained through a special genome project page or directly from here. The result of RPS-BLAST against PDB database, and a summary of amino acid differences in proteins of these viruses are available at Riken National Institute of Japan.

The following pandemic (H1N1) 2009 virus sequences were submitted to NCBI and are available in GenBank:

November 20, 2009, 1 submitted by Fondazione IRCCS Policlinico San Matteo, Italy:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Pavia/21/2009(H1N1))
GU216651*
* This sequence has the H274Y mutation that confers resistance to Oseltamivir.

November 19, 2009, 32 submitted by Federal State Research Institution, Russia; 1 by Veterinary Specialized Institute 'Kraljevo', Serbia:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Kyrgyzstan/01/2009(H1N1))
GU211234 GU211233 GU211232 GU211227 GU211230 GU211229 GU211228 GU211231
Influenza A virus
(A/Omsk/02/2009(H1N1))
GU211242 GU211241 GU211240 GU211235 GU211238 GU211237 GU211236 GU211239
Influenza A virus
(A/Serbia/3547/2009(H1N1))
GU214058
Influenza A virus
(A/Tomsk/02/2009(H1N1))
GU211250 GU211249 GU211248 GU211243 GU211246 GU211245 GU211244 GU211247
Influenza A virus
(A/Vladivostok/01/2009(H1N1))
GU211226 GU211225 GU211224 GU211219 GU211222 GU211221 GU211220 GU211223

November 18, 2009, 1080 submitted by JCVI; 3 by National Influenza Center, Mongolia:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Houston/1OS/2009(H1N1))
CY051910 CY051909 CY051908 CY051903 CY051906 CY051905 CY051904 CY051907
Influenza A virus
(A/Houston/2H/2009(H1N1))
CY051918 CY051917 CY051916 CY051911 CY051914 CY051913 CY051912 CY051915
Influenza A virus
(A/Houston/9OS/2009(H1N1))
CY051926 CY051925 CY051924 CY051919 CY051922 CY051921 CY051920 CY051923
Influenza A virus
(A/Mexico City/005/2009(H1N1))
CY050886 CY050885 CY050884 CY050879 CY050882 CY050881 CY050880 CY050883
Influenza A virus
(A/Mexico City/007/2009(H1N1))
CY050854 CY050853 CY050852 CY050847 CY050850 CY050849 CY050848 CY050851
Influenza A virus
(A/Mexico City/009/2009(H1N1))
CY050862 CY050861 CY050860 CY050855 CY050858 CY050857 CY050856 CY050859
Influenza A virus
(A/Mexico City/013/2009(H1N1))
CY050870 CY050869 CY050868 CY050863 CY050866 CY050865 CY050864 CY050867
Influenza A virus
(A/Mexico City/017/2009(H1N1))
CY050878 CY050877 CY050876 CY050871 CY050874 CY050873 CY050872 CY050875
Influenza A virus
(A/Mexico City/018/2009(H1N1))
CY050894 CY050893 CY050892 CY050887 CY050890 CY050889 CY050888 CY050891
Influenza A virus
(A/New York/4400/2009(H1N1))
CY051534 CY051533 CY051532 CY051527 CY051530 CY051529 CY051528 CY051531
Influenza A virus
(A/New York/4402/2009(H1N1))
CY051542 CY051541 CY051540 CY051535 CY051538 CY051537 CY051536 CY051539
Influenza A virus
(A/New York/4403/2009(H1N1))
CY051550 CY051549 CY051548 CY051543 CY051546 CY051545 CY051544 CY051547
Influenza A virus
(A/New York/4434/2009(H1N1))
CY051558 CY051557 CY051556 CY051551 CY051554 CY051553 CY051552 CY051555
Influenza A virus
(A/New York/4459/2009(H1N1))
CY051566 CY051565 CY051564 CY051559 CY051562 CY051561 CY051560 CY051563
Influenza A virus
(A/New York/4476/2009(H1N1))
CY051574 CY051573 CY051572 CY051567 CY051570 CY051569 CY051568 CY051571
Influenza A virus
(A/New York/4500/2009(H1N1))
CY051582 CY051581 CY051580 CY051575 CY051578 CY051577 CY051576 CY051579
Influenza A virus
(A/New York/4556/2009(H1N1))
CY051590 CY051589 CY051588 CY051583 CY051586 CY051585 CY051584 CY051587
Influenza A virus
(A/New York/4565/2009(H1N1))
CY051598 CY051597 CY051596 CY051591 CY051594 CY051593 CY051592 CY051595
Influenza A virus
(A/New York/4566/2009(H1N1))
CY051606 CY051605 CY051604 CY051599 CY051602 CY051601 CY051600 CY051603
Influenza A virus
(A/New York/4567/2009(H1N1))
CY051614 CY051613 CY051612 CY051607 CY051610 CY051609 CY051608 CY051611
Influenza A virus
(A/New York/4568/2009(H1N1))
CY051622 CY051621 CY051620 CY051615 CY051618 CY051617 CY051616 CY051619
Influenza A virus
(A/New York/4607/2009(H1N1))
CY051630 CY051629 CY051628 CY051623 CY051626 CY051625 CY051624 CY051627
Influenza A virus
(A/New York/4620/2009(H1N1))
CY051638 CY051637 CY051636 CY051631 CY051634 CY051633 CY051632 CY051635
Influenza A virus
(A/New York/4677/2009(H1N1))
CY051646 CY051645 CY051644 CY051639 CY051642 CY051641 CY051640 CY051643
Influenza A virus
(A/New York/4691/2009(H1N1))
CY051654 CY051653 CY051652 CY051647 CY051650 CY051649 CY051648 CY051651
Influenza A virus
(A/New York/4728/2009(H1N1))
CY051662 CY051661 CY051660 CY051655 CY051658 CY051657 CY051656 CY051659
Influenza A virus
(A/New York/4735/2009(H1N1))
CY051670 CY051669 CY051668 CY051663 CY051666 CY051665 CY051664 CY051667
Influenza A virus
(A/New York/4738/2009(H1N1))
CY051678 CY051677 CY051676 CY051671 CY051674 CY051673 CY051672 CY051675
Influenza A virus
(A/New York/4747/2009(H1N1))
CY051686 CY051685 CY051684 CY051679 CY051682 CY051681 CY051680 CY051683
Influenza A virus
(A/New York/4761/2009(H1N1))
CY051694 CY051693 CY051692 CY051687 CY051690 CY051689 CY051688 CY051691
Influenza A virus
(A/New York/4777/2009(H1N1))
CY051702 CY051701 CY051700 CY051695 CY051698 CY051697 CY051696 CY051699
Influenza A virus
(A/New York/4780/2009(H1N1))
CY051710 CY051709 CY051708 CY051703 CY051706 CY051705 CY051704 CY051707
Influenza A virus
(A/New York/4787/2009(H1N1))
CY051718 CY051717 CY051716 CY051711 CY051714 CY051713 CY051712 CY051715
Influenza A virus
(A/New York/4789/2009(H1N1))
CY051726 CY051725 CY051724 CY051719 CY051722 CY051721 CY051720 CY051723
Influenza A virus
(A/New York/4790/2009(H1N1))
CY051734 CY051733 CY051732 CY051727 CY051730 CY051729 CY051728 CY051731
Influenza A virus
(A/New York/4791/2009(H1N1))
CY051742 CY051741 CY051740 CY051735 CY051738 CY051737 CY051736 CY051739
Influenza A virus
(A/New York/4810/2009(H1N1))
CY051750 CY051749 CY051748 CY051743 CY051746 CY051745 CY051744 CY051747
Influenza A virus
(A/New York/4820/2009(H1N1))
CY051758 CY051757 CY051756 CY051751 CY051754 CY051753 CY051752 CY051755
Influenza A virus
(A/New York/4823/2009(H1N1))
CY051766 CY051765 CY051764 CY051759 CY051762 CY051761 CY051760 CY051763
Influenza A virus
(A/New York/4824/2009(H1N1))
CY051774 CY051773 CY051772 CY051767 CY051770 CY051769 CY051768 CY051771
Influenza A virus
(A/New York/4841/2009(H1N1))
CY051782 CY051781 CY051780 CY051775 CY051778 CY051777 CY051776 CY051779
Influenza A virus
(A/New York/4844/2009(H1N1))
CY051790 CY051789 CY051788 CY051783 CY051786 CY051785 CY051784 CY051787
Influenza A virus
(A/New York/4856/2009(H1N1))
CY051798 CY051797 CY051796 CY051791 CY051794 CY051793 CY051792 CY051795
Influenza A virus
(A/New York/4866/2009(H1N1))
CY051806 CY051805 CY051804 CY051799 CY051802 CY051801 CY051800 CY051803
Influenza A virus
(A/New York/4870/2009(H1N1))
CY051814 CY051813 CY051812 CY051807 CY051810 CY051809 CY051808 CY051811
Influenza A virus
(A/Texas/42113095/2009(H1N1))
CY051886 CY051885 CY051884 CY051879 CY051882 CY051881 CY051880 CY051883
Influenza A virus
(A/Texas/42114261/2009(H1N1))
CY051894 CY051893 CY051892 CY051887 CY051890 CY051889 CY051888 CY051891
Influenza A virus
(A/Texas/42122969/2009(H1N1))
CY051862 CY051861 CY051860 CY051855 CY051858 CY051857 CY051856 CY051859
Influenza A virus
(A/Texas/42123701/2009(H1N1))
CY051846 CY051845 CY051844 CY051839 CY051842 CY051841 CY051840 CY051843
Influenza A virus
(A/Texas/42152486/2009(H1N1))
CY051822 CY051821 CY051820 CY051815 CY051818 CY051817 CY051816 CY051819
Influenza A virus
(A/Texas/42173957/2009(H1N1))
CY051878 CY051877 CY051876 CY051871 CY051874 CY051873 CY051872 CY051875
Influenza A virus
(A/Texas/42191653/2009(H1N1))
CY051854 CY051853 CY051852 CY051847 CY051850 CY051849 CY051848 CY051851
Influenza A virus
(A/Texas/42201824/2009(H1N1))
CY051870 CY051869 CY051868 CY051863 CY051866 CY051865 CY051864 CY051867
Influenza A virus
(A/Texas/43011033/2009(H1N1))
CY051838 CY051837 CY051836 CY051831 CY051834 CY051833 CY051832 CY051835
Influenza A virus
(A/Texas/43242018/2009(H1N1))
CY051830 CY051829 CY051828 CY051823 CY051826 CY051825 CY051824 CY051827
Influenza A virus
(A/Texas/45062633/2009(H1N1))
CY051902 CY051901 CY051900 CY051895 CY051898 CY051897 CY051896 CY051899
Influenza A virus
(A/Ulaanbaatar/5882/2009(H1N1))
CY050844
Influenza A virus
(A/Ulaanbaatar/6133/2009(H1N1))
CY050846
Influenza A virus
(A/Ulaanbaatar/6266/2009(H1N1))
CY050845
Influenza A virus
(A/Wisconsin/629-D00008/2009(H1N1))
CY051054 CY051053 CY051052 CY051047 CY051050 CY051049 CY051048 CY051051
Influenza A virus
(A/Wisconsin/629-D00017/2009(H1N1))
CY051030 CY051029 CY051028 CY051023 CY051026 CY051025 CY051024 CY051027
Influenza A virus
(A/Wisconsin/629-D00022/2009(H1N1))
CY051230 CY051229 CY051228 CY051223 CY051226 CY051225 CY051224 CY051227
Influenza A virus
(A/Wisconsin/629-D00101/2009(H1N1))
CY051070 CY051069 CY051068 CY051063 CY051066 CY051065 CY051064 CY051067
Influenza A virus
(A/Wisconsin/629-D00119/2009(H1N1))
CY051134 CY051133 CY051132 CY051127 CY051130 CY051129 CY051128 CY051131
Influenza A virus
(A/Wisconsin/629-D00196/2009(H1N1))
CY051102 CY051101 CY051100 CY051095 CY051098 CY051097 CY051096 CY051099
Influenza A virus
(A/Wisconsin/629-D00367/2009(H1N1))
CY050982 CY050981 CY050980 CY050975 CY050978 CY050977 CY050976 CY050979
Influenza A virus
(A/Wisconsin/629-D00374/2009(H1N1))
CY050950 CY050949 CY050948 CY050943 CY050946 CY050945 CY050944 CY050947
Influenza A virus
(A/Wisconsin/629-D00426/2009(H1N1))
CY050934 CY050933 CY050932 CY050927 CY050930 CY050929 CY050928 CY050931
Influenza A virus
(A/Wisconsin/629-D00428/2009(H1N1))
CY051182 CY051181 CY051180 CY051175 CY051178 CY051177 CY051176 CY051179
Influenza A virus
(A/Wisconsin/629-D00453/2009(H1N1))
CY051022 CY051021 CY051020 CY051015 CY051018 CY051017 CY051016 CY051019
Influenza A virus
(A/Wisconsin/629-D00496/2009(H1N1))
CY051198 CY051197 CY051196 CY051191 CY051194 CY051193 CY051192 CY051195
Influenza A virus
(A/Wisconsin/629-D00541/2009(H1N1))
CY051166 CY051165 CY051164 CY051159 CY051162 CY051161 CY051160 CY051163
Influenza A virus
(A/Wisconsin/629-D00579/2009(H1N1))
CY051078 CY051077 CY051076 CY051071 CY051074 CY051073 CY051072 CY051075
Influenza A virus
(A/Wisconsin/629-D00592/2009(H1N1))
CY050990 CY050989 CY050988 CY050983 CY050986 CY050985 CY050984 CY050987
Influenza A virus
(A/Wisconsin/629-D00658/2009(H1N1))
CY051038 CY051037 CY051036 CY051031 CY051034 CY051033 CY051032 CY051035
Influenza A virus
(A/Wisconsin/629-D00665/2009(H1N1))
CY051006 CY051005 CY051004 CY050999 CY051002 CY051001 CY051000 CY051003
Influenza A virus
(A/Wisconsin/629-D00724/2009(H1N1))
CY050958 CY050957 CY050956 CY050951 CY050954 CY050953 CY050952 CY050955
Influenza A virus
(A/Wisconsin/629-D00725/2009(H1N1))
CY051046 CY051045 CY051044 CY051039 CY051042 CY051041 CY051040 CY051043
Influenza A virus
(A/Wisconsin/629-D00916/2009(H1N1))
CY051126 CY051125 CY051124 CY051119 CY051122 CY051121 CY051120 CY051123
Influenza A virus
(A/Wisconsin/629-D00941/2009(H1N1))
CY050966 CY050965 CY050964 CY050959 CY050962 CY050961 CY050960 CY050963
Influenza A virus
(A/Wisconsin/629-D00949/2009(H1N1))
CY050902 CY050901 CY050900 CY050895 CY050898 CY050897 CY050896 CY050899
Influenza A virus
(A/Wisconsin/629-D01147/2009(H1N1))
CY051158 CY051157 CY051156 CY051151 CY051154 CY051153 CY051152 CY051155
Influenza A virus
(A/Wisconsin/629-D01152/2009(H1N1))
CY051142 CY051141 CY051140 CY051135 CY051138 CY051137 CY051136 CY051139
Influenza A virus
(A/Wisconsin/629-D01199/2009(H1N1))
CY051246 CY051245 CY051244 CY051239 CY051242 CY051241 CY051240 CY051243
Influenza A virus
(A/Wisconsin/629-D01262/2009(H1N1))
CY050918 CY050917 CY050916 CY050911 CY050914 CY050913 CY050912 CY050915
Influenza A virus
(A/Wisconsin/629-D01326/2009(H1N1))
CY051086 CY051085 CY051084 CY051079 CY051082 CY051081 CY051080 CY051083
Influenza A virus
(A/Wisconsin/629-D01414/2009(H1N1))
CY051214 CY051213 CY051212 CY051207 CY051210 CY051209 CY051208 CY051211
Influenza A virus
(A/Wisconsin/629-D01618/2009(H1N1))
CY051110 CY051109 CY051108 CY051103 CY051106 CY051105 CY051104 CY051107
Influenza A virus
(A/Wisconsin/629-D01619/2009(H1N1))
CY051014 CY051013 CY051012 CY051007 CY051010 CY051009 CY051008 CY051011
Influenza A virus
(A/Wisconsin/629-D01664/2009(H1N1))
CY051238 CY051237 CY051236 CY051231 CY051234 CY051233 CY051232 CY051235
Influenza A virus
(A/Wisconsin/629-D01725/2009(H1N1))
CY050974 CY050973 CY050972 CY050967 CY050970 CY050969 CY050968 CY050971
Influenza A virus
(A/Wisconsin/629-D01734/2009(H1N1))
CY051150 CY051149 CY051148 CY051143 CY051146 CY051145 CY051144 CY051147
Influenza A virus
(A/Wisconsin/629-D01779/2009(H1N1))
CY050910 CY050909 CY050908 CY050903 CY050906 CY050905 CY050904 CY050907
Influenza A virus
(A/Wisconsin/629-D01844/2009(H1N1))
CY051094 CY051093 CY051092 CY051087 CY051090 CY051089 CY051088 CY051091
Influenza A virus
(A/Wisconsin/629-D01847/2009(H1N1))
CY050942 CY050941 CY050940 CY050935 CY050938 CY050937 CY050936 CY050939
Influenza A virus
(A/Wisconsin/629-D01903/2009(H1N1))
CY050998 CY050997 CY050996 CY050991 CY050994 CY050993 CY050992 CY050995
Influenza A virus
(A/Wisconsin/629-D02024/2009(H1N1))
CY051206 CY051205 CY051204 CY051199 CY051202 CY051201 CY051200 CY051203
Influenza A virus
(A/Wisconsin/629-D02063/2009(H1N1))
CY051174 CY051173 CY051172 CY051167 CY051170 CY051169 CY051168 CY051171
Influenza A virus
(A/Wisconsin/629-D02068/2009(H1N1))
CY051062 CY051061 CY051060 CY051055 CY051058 CY051057 CY051056 CY051059
Influenza A virus
(A/Wisconsin/629-D02213/2009(H1N1))
CY050926 CY050925 CY050924 CY050919 CY050922 CY050921 CY050920 CY050923
Influenza A virus
(A/Wisconsin/629-D02220/2009(H1N1))
CY051190 CY051189 CY051188 CY051183 CY051186 CY051185 CY051184 CY051187
Influenza A virus
(A/Wisconsin/629-D02263/2009(H1N1))
CY051118 CY051117 CY051116 CY051111 CY051114 CY051113 CY051112 CY051115
Influenza A virus
(A/Wisconsin/629-D02292/2009(H1N1))
CY051222 CY051221 CY051220 CY051215 CY051218 CY051217 CY051216 CY051219
Influenza A virus
(A/Wisconsin/629-S0035/2009(H1N1))
CY051254 CY051253 CY051252 CY051247 CY051250 CY051249 CY051248 CY051251
Influenza A virus
(A/Wisconsin/629-S0086/2009(H1N1))
CY051262 CY051261 CY051260 CY051255 CY051258 CY051257 CY051256 CY051259
Influenza A virus
(A/Wisconsin/629-S0143/2009(H1N1))
CY051270 CY051269 CY051268 CY051263 CY051266 CY051265 CY051264 CY051267
Influenza A virus
(A/Wisconsin/629-S0146/2009(H1N1))
CY051278 CY051277 CY051276 CY051271 CY051274 CY051273 CY051272 CY051275
Influenza A virus
(A/Wisconsin/629-S0148/2009(H1N1))
CY051286 CY051285 CY051284 CY051279 CY051282 CY051281 CY051280 CY051283
Influenza A virus
(A/Wisconsin/629-S0173/2009(H1N1))
CY051294 CY051293 CY051292 CY051287 CY051290 CY051289 CY051288 CY051291
Influenza A virus
(A/Wisconsin/629-S0186/2009(H1N1))
CY051302 CY051301 CY051300 CY051295 CY051298 CY051297 CY051296 CY051299
Influenza A virus
(A/Wisconsin/629-S0189/2009(H1N1))
CY051502 CY051501 CY051500 CY051495 CY051498 CY051497 CY051496 CY051499
Influenza A virus
(A/Wisconsin/629-S0197/2009(H1N1))
CY051310 CY051309 CY051308 CY051303 CY051306 CY051305 CY051304 CY051307
Influenza A virus
(A/Wisconsin/629-S0201/2009(H1N1))
CY051318 CY051317 CY051316 CY051311 CY051314 CY051313 CY051312 CY051315
Influenza A virus
(A/Wisconsin/629-S0202/2009(H1N1))
CY051326 CY051325 CY051324 CY051319 CY051322 CY051321 CY051320 CY051323
Influenza A virus
(A/Wisconsin/629-S0203/2009(H1N1))
CY051334 CY051333 CY051332 CY051327 CY051330 CY051329 CY051328 CY051331
Influenza A virus
(A/Wisconsin/629-S0206/2009(H1N1))
CY051510 CY051509 CY051508 CY051503 CY051506 CY051505 CY051504 CY051507
Influenza A virus
(A/Wisconsin/629-S0208/2009(H1N1))
CY051518 CY051517 CY051516 CY051511 CY051514 CY051513 CY051512 CY051515
Influenza A virus
(A/Wisconsin/629-S0220/2009(H1N1))
CY051342 CY051341 CY051340 CY051335 CY051338 CY051337 CY051336 CY051339
Influenza A virus
(A/Wisconsin/629-S0222/2009(H1N1))
CY051350 CY051349 CY051348 CY051343 CY051346 CY051345 CY051344 CY051347
Influenza A virus
(A/Wisconsin/629-S0226/2009(H1N1))
CY051358 CY051357 CY051356 CY051351 CY051354 CY051353 CY051352 CY051355
Influenza A virus
(A/Wisconsin/629-S0229/2009(H1N1))
CY051526 CY051525 CY051524 CY051519 CY051522 CY051521 CY051520 CY051523
Influenza A virus
(A/Wisconsin/629-S0245/2009(H1N1))
CY051366 CY051365 CY051364 CY051359 CY051362 CY051361 CY051360 CY051363
Influenza A virus
(A/Wisconsin/629-S0247/2009(H1N1))
CY051382 CY051381 CY051380 CY051375 CY051378 CY051377 CY051376 CY051379
Influenza A virus
(A/Wisconsin/629-S0248/2009(H1N1))
CY051374 CY051373 CY051372 CY051367 CY051370 CY051369 CY051368 CY051371
Influenza A virus
(A/Wisconsin/629-S0252/2009(H1N1))
CY051406 CY051405 CY051404 CY051399 CY051402 CY051401 CY051400 CY051403
Influenza A virus
(A/Wisconsin/629-S0254/2009(H1N1))
CY051390 CY051389 CY051388 CY051383 CY051386 CY051385 CY051384 CY051387
Influenza A virus
(A/Wisconsin/629-S0255/2009(H1N1))
CY051398 CY051397 CY051396 CY051391 CY051394 CY051393 CY051392 CY051395
Influenza A virus
(A/Wisconsin/629-S0269/2009(H1N1))
CY051414 CY051413 CY051412 CY051407 CY051410 CY051409 CY051408 CY051411
Influenza A virus
(A/Wisconsin/629-S0279/2009(H1N1))
CY051430 CY051429 CY051428 CY051423 CY051426 CY051425 CY051424 CY051427
Influenza A virus
(A/Wisconsin/629-S0280/2009(H1N1))
CY051422 CY051421 CY051420 CY051415 CY051418 CY051417 CY051416 CY051419
Influenza A virus
(A/Wisconsin/629-S0293/2009(H1N1))
CY051438 CY051437 CY051436 CY051431 CY051434 CY051433 CY051432 CY051435
Influenza A virus
(A/Wisconsin/629-S0314/2009(H1N1))
CY051470 CY051469 CY051468 CY051463 CY051466 CY051465 CY051464 CY051467
Influenza A virus
(A/Wisconsin/629-S0319/2009(H1N1))
CY051446 CY051445 CY051444 CY051439 CY051442 CY051441 CY051440 CY051443
Influenza A virus
(A/Wisconsin/629-S0339/2009(H1N1))
CY051462 CY051461 CY051460 CY051455 CY051458 CY051457 CY051456 CY051459
Influenza A virus
(A/Wisconsin/629-S0345/2009(H1N1))
CY051454 CY051453 CY051452 CY051447 CY051450 CY051449 CY051448 CY051451
Influenza A virus
(A/Wisconsin/629-S0410/2009(H1N1))
CY051486 CY051485 CY051484 CY051479 CY051482 CY051481 CY051480 CY051483
Influenza A virus
(A/Wisconsin/629-S0435/2009(H1N1))
CY051478 CY051477 CY051476 CY051471 CY051474 CY051473 CY051472 CY051475
Influenza A virus
(A/Wisconsin/629-S0464/2009(H1N1))
CY051494 CY051493 CY051492 CY051487 CY051490 CY051489 CY051488 CY051491

November 17, 2009, 32 submitted by Genome Institute of Singapore, Singapore; 88 by JCVI; 2 by Defence R&D Establishment, India:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/India/GWMH01/2009(H1N1))
GU201598
Influenza A virus
(A/India/GWMH02/2009(H1N1))
GU201599
Influenza A virus
(A/Singapore/279M/2009(H1N1))
CY050360 CY050361 CY050362 CY050363 CY050364 CY050365 CY050366 CY050367
Influenza A virus
(A/Singapore/9061364/2009(H1N1))
CY050336 CY050337 CY050338 CY050339 CY050340 CY050341 CY050342 CY050343
Influenza A virus
(A/Singapore/9061365/2009(H1N1))
CY050344 CY050345 CY050346 CY050347 CY050348 CY050349 CY050350 CY050351
Influenza A virus
(A/Singapore/9061366/2009(H1N1))
CY050352 CY050353 CY050354 CY050355 CY050356 CY050357 CY050358 CY050359
Influenza A virus
(A/Wisconsin/629-D00451/2009(H1N1))
CY050411 CY050410 CY050409 CY050404 CY050407 CY050406 CY050405 CY050408
Influenza A virus
(A/Wisconsin/629-D00752/2009(H1N1))
CY050419 CY050418 CY050417 CY050412 CY050415 CY050414 CY050413 CY050416
Influenza A virus
(A/Wisconsin/629-D00989/2009(H1N1))
CY050403 CY050402 CY050401 CY050396 CY050399 CY050398 CY050397 CY050400
Influenza A virus
(A/Wisconsin/629-D01154/2009(H1N1))
CY050379 CY050378 CY050377 CY050372 CY050375 CY050374 CY050373 CY050376
Influenza A virus
(A/Wisconsin/629-D01295/2009(H1N1))
CY050387 CY050386 CY050385 CY050380 CY050383 CY050382 CY050381 CY050384
Influenza A virus
(A/Wisconsin/629-D01482/2009(H1N1))
CY050451 CY050450 CY050449 CY050444 CY050447 CY050446 CY050445 CY050448
Influenza A virus
(A/Wisconsin/629-D01839/2009(H1N1))
CY050395 CY050394 CY050393 CY050388 CY050391 CY050390 CY050389 CY050392
Influenza A virus
(A/Wisconsin/629-D01851/2009(H1N1))
CY050335 CY050334 CY050333 CY050328 CY050331 CY050330 CY050329 CY050332
Influenza A virus
(A/Wisconsin/629-D01886/2009(H1N1))
CY050443 CY050442 CY050441 CY050436 CY050439 CY050438 CY050437 CY050440
Influenza A virus
(A/Wisconsin/629-D02206/2009(H1N1))
CY050427 CY050426 CY050425 CY050420 CY050423 CY050422 CY050421 CY050424
Influenza A virus
(A/Wisconsin/629-D02324/2009(H1N1))
CY050435 CY050434 CY050433 CY050428 CY050431 CY050430 CY050429 CY050432

November 16, 2009, 8 submitted by Jiangsu Provincial Center for Disease Prevention and Control, China:

PB2 PB1 PA HA NP NA MP NS
Influenza A virus
(A/Nanjing/3/2009(H1N1))
GU198198 GU198199 GU198200 GU198201 GU198202 GU198203 GU198204 GU198205

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