Flu home
Database
Genome Set
Alignment
Tree
BLAST
Annotation
FTP
Help
Contact us
NIAID Influenza Genome Sequencing Project Data Releasing Status
Status
Virus Species
Sample provider
Country
Subtype
Host
From year
To year
Released
any
Influenzavirus A
Influenzavirus B
any
Adelaide
Australian Animal Health Laboratory
Baylor
Berkeley
CDC
CSIRO
Chang Gung
Hong Kong
Innovative Biotech
Italy
Long Island
Mexico
Mount Sinai
NIAID
NIGSP-DW
NYMC
NYSDOH
NYSDOH-WA
NYSDOH-WP
New Zealand
OSU
Perth
Prince of Wales Hospital
Queensland
SDI
Saskatchewan
St Jude
UC Davis
USAF
University of Ottawa
University of Siena
any
SELECT value FROM Influenza..Sample WHERE name='Country' group by value
Afghanistan
Africa
Argentina
Australia
Austria
Brazil
Bulgaria
Canada
Chile
China
China: Fujian
China: Guangxi
China: Hunan
China: Shantou
China: Yunnan
Cote d'Ivoire
Croatia
Czech Republic
Egypt
El Salvador
England
France
Germany
Guam
Honduras
Hong Kong
Hungary
India
Iran
Iraq
Italy
Japan
Kenya
Kosovo
Kuwait
Kyrgyzstan
Laos
Macau
Malaysia
Mexico
Nepal
Netherlands
New Caledonia
New Zealand
Nicaragua
Niger
Nigeria
Northern Mariana Islands
Panama
Papua New Guinea
Paraguay
Philippines
Philppines
Portugal
Puerto Rico
Qatar
Romania
Russia
Singapore
Slovenia
Solomon Islands
South Africa
South Korea
Spain
Sri Lanka
Sudan
Switzerland
Taiwan
Thailand
Tonga
USA
United Kingdom
Uruguay
Uzbekistan
Viet Nam
any
SELECT value FROM Influenza..Sample WHERE name='Subtype' group by value
H1
H10
H10N2
H10N3
H10N6
H10N7
H10N8
H11
H11N1
H11N2
H11N3
H11N5
H11N6
H11N7
H11N8
H11N9
H12
H12N5
H12N6
H12N9
H13N6
H15
H15N6
H15N9
H1N1
H1N2
H1N6
H1N9
H2
H2N1
H2N2
H2N3
H2N6
H2N9
H3
H3N1
H3N2
H3N4
H3N6
H3N8
H4
H4N2
H4N4
H4N4,8
H4N6
H4N8
H5
H5N1
H5N2
H5N3
H5N8
H5N9
H6
H6N1
H6N2
H6N4
H6N5
H6N6
H6N8
H7N1
H7N2
H7N3
H7N4
H7N5
H7N6
H7N7
H7N8
H7N9
H8
H8N3
H8N4
H9
H9N1
H9N2
H9N3
H?N?
HN
Mixed
N2
any
Avian
SELECT value FROM Influenza..Sample WHERE name='Host' group by value
American Black Duck
American Wigeon
American black duck
American green-winged Teal
American green-winged teal
Australian shelduck
Avian
Black Duck
Blue-Winged Teal
Blue-winged Teal
Blue-winged teal
Bufflehead
Cackling goose
Canada Goose
Chestnut teal
Chicken
Chukar
Common Scoter
Cygnus Cygnus
Cygnus Olor
Duck
Emu
Environment
Equine
Eurasian Coot
Gadwall
Goose
Gray teal
Green Wing Teal
Green-winged Teal
Green-winged teal
Guinea Fowl
Guinea fowl
Gull
Human
Laughing gull
Lesser Noddy
Longtail Duck
Mallard
Muscovy Duck
Muscovy duck
Northern Pintail
Northern Shoveler
Northern pintail
Northern shoveler
Ostrich
Pacific Black duck
Pacific black duck
Packfic Black duck
Pekin Duck
Pheasant
Pigeon
Pintail
Poultry
Quail
Red-necked Stint
Red-necked stint
Redhead
Ring-necked Duck
Ring-necked duck
Ruddy turnstone
Sharp-tailed Sandpiper
Shearwater
Shoveler
Silver gull
Snow Goose
Snow goose
Sooty Tern
Starling
Swan
Swine
Swine, Human
Teal
Tern
Turkey
Unknown
Wedge-tailed Shearwater
Wedge-tailed shearwater
White-winged Scoter
Wigeon
Wood Duck
chicken
chukar
chukkar
duck
goose
muscovy duck
partridge
pheasant
quail
silky chicken
swine
turkey
wild duck
Sample provider
All subtypes
Subtype breakdowns
H3N2
H1N1
H1N2
Other
Released
To come
All
Released
To come
All
Released
To come
All
Released
To come
All
Released
To come
All
Adelaide
46
2000-2005
5
2000-2005
51
29
2000-2005
2
2000-2005
31
17
2000-2005
3
2000-2000
20
0
0
0
0
0
0
Australian Animal Health Laboratory
6
2004-2004
26
2004-2005
32
0
0
0
0
0
0
0
0
0
6
2004-2004
26
2004-2005
32
Baylor
48
1997-2005
0
48
0
0
0
0
0
0
0
0
0
48
1997-2005
0
48
Berkeley
0
22
2007-2007
22
0
22
2007-2007
22
0
0
0
0
0
0
0
0
0
CDC
100
1987-2006
1
1999-1999
101
0
0
0
0
0
0
0
0
0
100
1987-2006
1
1999-1999
101
CSIRO
23
1976-2004
60
1972-2007
83
0
1
2001-2001
1
0
0
0
0
0
0
23
1976-2004
59
1972-2007
82
Chang Gung
3
2004-2006
50
2001-2007
53
0
0
0
0
0
0
0
0
0
3
2004-2006
50
2001-2007
53
Hong Kong
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
Innovative Biotech
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
Italy
114
1980-2006
48
1997-2006
162
0
0
0
0
0
0
0
0
0
114
1980-2006
48
1997-2006
162
Long Island
97
1998-2005
1
2002-2002
98
74
1998-2005
0
74
15
2001-2003
1
2002-2002
16
8
2002-2003
0
8
0
0
0
Mexico
0
19
1999-2004
19
0
19
1999-2004
19
0
0
0
0
0
0
0
0
0
Mount Sinai
11
1942-2004
3
1947-2003
14
4
2001-2004
0
4
7
1942-2004
3
1947-2003
10
0
0
0
0
0
0
NIAID
12
1931-1976
1
1935-1935
13
5
1968-1973
0
5
7
1931-1976
1
1935-1935
8
0
0
0
0
0
0
NIGSP-DW
59
2005-2006
180
1966-2006
239
0
0
0
1
2005-2005
12
2005-2006
13
0
0
0
58
2005-2006
168
1966-2006
226
NYMC
0
92
1933-2007
92
0
52
1968-2007
52
0
16
1933-2006
16
0
0
0
0
24
1940-2006
24
NYSDOH
692
1993-2005
13
1998-2004
705
612
1993-2005
9
1998-2004
621
66
1995-2003
0
66
14
2002-2003
4
2003-2003
18
0
0
0
NYSDOH-WA
46
1948-1979
3
1957-1967
49
19
1968-1978
0
19
8
1948-1979
0
8
0
0
0
19
1957-1968
3
1957-1967
22
NYSDOH-WP
42
2004-2006
1
2004-2004
43
42
2004-2006
1
2004-2004
43
0
0
0
0
0
0
0
0
0
New Zealand
591
1999-2005
30
2000-2005
621
443
1999-2005
20
2000-2005
463
147
2000-2005
10
2000-2001
157
0
0
0
1
2000-2000
0
1
OSU
179
1986-2006
98
1986-2007
277
13
1986-2005
3
2005-2006
16
9
1987-2005
1
2002-2002
10
0
0
0
157
1986-2006
94
1986-2007
251
Perth
77
2000-2005
2
2000-2002
79
71
2000-2005
2
2000-2002
73
6
2001-2005
0
6
0
0
0
0
0
0
Prince of Wales Hospital
28
1999-2000
0
28
24
1999-2000
0
24
4
1999-2000
0
4
0
0
0
0
0
0
Queensland
56
2000-2005
0
56
56
2000-2005
0
56
0
0
0
0
0
0
0
0
0
SDI
410
2002-2007
111
2004-2007
521
79
2002-2007
22
2007-2007
101
293
2006-2007
65
2007-2007
358
1
2003-2003
0
1
37
2006-2007
24
2004-2007
61
Saskatchewan
0
197
2005-2007
197
0
0
0
0
0
0
0
0
0
0
197
2005-2007
197
St Jude
344
1933-2003
126
1956-2007
470
96
1968-2003
10
1973-1990
106
213
1933-2003
32
1961-2003
245
0
0
0
35
1963-2002
84
1956-2007
119
UC Davis
0
12
2005-2006
12
0
0
0
0
0
0
0
0
0
0
12
2005-2006
12
USAF
0
10
2007-2008
10
0
5
2007-2008
5
0
5
2007-2008
5
0
0
0
0
0
0
University of Ottawa
0
92
1933-1982
92
0
56
1968-1982
56
0
10
1933-1976
10
0
0
0
0
26
1956-1979
26
University of Siena
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
Total
2984
1203
4187
1567
224
1791
793
159
952
23
4
27
601
816
1417
May 9, 2008
|
Disclaimer
|
Privacy statement
|
Accessibility
|