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What are you looking for?
Select one name each from the lists provided, and/or fill in the boxes. Multiple queries can be built by clicking the "Add to Query Builder" button every time a new query is made, and queries in any combination from the Query Builder can be selected to get sequences in the database. An advanced search tool is available
here
.
show:
Protein sequence
Coding region
Nucleotide sequence
Virus Species
Host
Country/Region
Segment
any
Influenzavirus A
Influenzavirus B
Influenzavirus C
any
Avian
Camel
Canine
Cat
Civet
Environment
Equine
Human
Leopard
Mink
Mouse
Seal
Stone marten
Swine
Tiger
Unknown
Whale
any
Africa
Asia
Europe
NorthAmerica
Oceania
SouthAmerica
Afghanistan
Algeria
Argentina
Australia
Austria
Bangladesh
Barbados
Belarus
Belgium
Bolivia
Brazil
Bulgaria
Burkina Faso
Cambodia
Canada
Chile
China
Colombia
Croatia
Czech Republic
Denmark
Djibouti
Ecuador
Egypt
El Salvador
Fiji
Finland
France
Gaza Strip
Georgia
Germany
Ghana
Greece
Guadeloupe
Guam
Guatemala
Honduras
Hong Kong
Hungary
Iceland
India
Indonesia
Iran
Iraq
Ireland
Israel
Italy
Japan
Jordan
Kazakhstan
Kenya
Laos
Latvia
Lithuania
Macau
Madagascar
Malaysia
Mexico
Mongolia
Morocco
Mozambique
Nepal
Netherlands
New Caledonia
New Zealand
Niger
Nigeria
North Korea
Northern Mariana Islands
Norway
Oman
Pakistan
Panama
Papua New Guinea
Paraguay
Peru
Philippines
Poland
Portugal
Puerto Rico
Qatar
Romania
Russia
Saudi Arabia
Senegal
Serbia and Montenegro
Singapore
Slovakia
Slovenia
Solomon Islands
South Africa
South Korea
Spain
Sri Lanka
Sudan
Sweden
Switzerland
Taiwan
Thailand
Tonga
Trinidad and Tobago
Turkey
Turkmenistan
USA
Ukraine
United Arab Emirates
United Kingdom
Uruguay
Venezuela
Viet Nam
Zambia
Zimbabwe
LAB
any
1 (PB2)
2 (PB1)
3 (PA)
4 (HA)
5 (NP)
6 (NA)
7 (MP)
8 (NS)
Subtype
From year
To year
Min. length
Max. length
Search by a string
Help
Full-length sequences only
Help
Remove identical sequences
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Sequences from the FLU project only
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Include Lab strains
Help
Query Builder
Virus species
Host
Country/Region
Segment
Subtype
Year
Length
Key word
Full-length
Remove identical sequences
NIAID project
Include Lab strains
Number of sequences
Influenzavirus A
any
USA
4 (HA)
H3
1998-2002
-
no
no
no
no
320
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here
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