Oryctolagus cuniculus (rabbit)
Representative genome: Oryctolagus cuniculus (assembly OryCun2.0)
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BLAST against Oryctolagus cuniculus genome, transcript, protein

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ID: 316
Organism ImageOryctolagus cuniculus (rabbit)

The rabbit is a popular pet and game animal that is used widely for medical research and product safety testing

Lineage: Eukaryota[1934]; Metazoa[681]; Chordata[292]; Craniata[285]; Vertebrata[285]; Euteleostomi[280]; Mammalia[122]; Eutheria[118]; Euarchontoglires[54]; Glires[24]; Lagomorpha[2]; Leporidae[1]; Oryctolagus[1]; Oryctolagus cuniculus[1]
The rabbit, Oryctolagus cuniculus, exists in the wild and as domesticated varieties. Rabbits are valued both as pets and as game animals and are also commonly used in medical research and in safety testing of consumer products, such as drugs and cosmetics. The Oryctolagus cuniculus haploid genome is estimated to be 3500 Mb. The diploid More...

Summary

Submitter: The Genome Sequencing Platform, The Assembly Computation and Development Core Team
Assembly level: Chromosome
Assembly: GCA_000003625.1 OryCun2.0 scaffolds: 3,318 contigs: 84,024 N50: 64,648 L50: 12,076
BioProjects: PRJNA42933, PRJNA12819
Whole Genome Shotgun (WGS): INSDC: AAGW00000000.2
Statistics: total length (Mb): 2737.46
 protein count: 37564
 GC%: 44.0526
NCBI Annotation Release:  101

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Replicon Info

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
NucChr1NC_013669.1CM000790.1194.8542.92,883-112712,195408
NucChr2NC_013670.1CM000791.1174.3342.61,797-82701,408274
NucChr3NC_013671.1CM000792.1155.6942.71,505-82651,153210
NucChr4NC_013672.1CM000793.191.3944.21,519-51861,053142
NucChr5NC_013673.1CM000794.137.9946.7682-96447937
NucChr6NC_013674.1CM000795.127.548.8449-34629922
NucChr7NC_013675.1CM000796.1173.6841.51,669-242171,244292
NucChr8NC_013676.1CM000797.1111.842.21,033-4137728152
NucChr9NC_013677.1CM000798.1116.2544.21,547-42221,045194
NucChr10NC_013678.1CM000799.14844.1482-110338958
NucChr11NC_013679.1CM000800.187.5541.6596-9116504123
NucChr12NC_013680.1CM000801.1155.3542.01,806-692051,455269
NucChr13NC_013681.1CM000802.1143.3644.92,737-1242681,925242
NucChr14NC_013682.1CM000803.1163.941.31,572-32291,143284
NucChr15NC_013683.1CM000804.1109.0540.9940-2131740189
NucChr16NC_013684.1CM000805.184.4844.0995-4141730126
NucChr17NC_013685.1CM000806.185.0143.41,342-25225989161
NucChr18NC_013686.1CM000807.169.844.61,038-4113696122
NucChr19NC_013687.1CM000808.157.2848.21,556-291351,05165
NucChr20NC_013688.1CM000809.133.1945.6397-15327340
NucChr21NC_013689.1CM000810.115.5850.9285--5320515
NucChrXNC_013690.1CM000811.1111.741.21,187-2871,013324
MTChrMTNC_001913.1AJ001588.10.01724540.213222-13-
Un-.-489.6948.69,53411111,1208,1731,113

Chromosomes

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