The dog,
Canis lupus familiaris, is a useful model organism for medical research due to extensive genetic diversity and morphological variation within the species and to aggressive breeding practices that have resulted in inbred populations of dogs. Many breeds of dog are particularly susceptible to inherited diseases that are also common in
More...humans, such as cancer, heart disease, rheumatoid arthritis, autoimmune disorders, deafness, and blindness. The size of the haploid dog genome is estimated to be 2445 Mb. The diploid genome is organized in 38 pairs of autosomes and two sex chromosomes. Less... 
Canis lupus familiaris CanFam3.1The reference sequence (RefSeq) genome assembly is provided by NCBI using assembly instructions provided by the Broad Institute. The assembled genome is distributed internationally by FTP and the same assembly can be viewed in browsers provided by NCBI, Ensembl, and the University of Santa Cruz (UCSC). Map Viewer currently displays version 2 of the WGS project AAEX00000000, also known by the designation CanFam2.0. |
Type
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Name
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RefSeq
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INSDC
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Size (Mb)
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GC%
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Protein
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rRNA
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tRNA
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Other RNA
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Gene
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Pseudogene
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| master WGS | - | AAEX00000000.3 | 2,392.71 | 35.0 | - | - | - | - | - | - | | | Chr | 1 | NC_006583.3 | CM000001.3 | 122.68 | 0.0 | 1,269 | - | 10 | 26 | 1,399 | 257 | | | Chr | 2 | NC_006584.3 | CM000002.3 | 85.43 | 0.0 | 900 | - | 6 | 16 | 904 | 141 | | | Chr | 3 | NC_006585.3 | CM000003.3 | 91.89 | 0.0 | 512 | - | 5 | 9 | 634 | 175 | | | Chr | 4 | NC_006586.3 | CM000004.3 | 88.28 | 0.0 | 606 | - | 3 | 12 | 700 | 182 | | | Chr | 5 | NC_006587.3 | CM000005.3 | 88.92 | 0.0 | 1,105 | - | 26 | 9 | 1,136 | 142 | | | Chr | 6 | NC_006588.3 | CM000006.3 | 77.57 | 0.0 | 970 | - | 26 | 14 | 1,015 | 143 | | | Chr | 7 | NC_006589.3 | CM000007.3 | 80.97 | 0.0 | 732 | - | 7 | 14 | 759 | 149 | | | Chr | 8 | NC_006590.3 | CM000008.3 | 74.33 | 0.0 | 668 | - | 6 | 8 | 777 | 170 | | | Chr | 9 | NC_006591.3 | CM000009.3 | 61.07 | 0.0 | 1,267 | - | 19 | 6 | 1,201 | 107 | | | Chr | 10 | NC_006592.3 | CM000010.3 | 69.33 | 0.0 | 691 | - | 8 | 12 | 777 | 156 | | | Chr | 11 | NC_006593.3 | CM000011.3 | 74.39 | 0.0 | 571 | - | 9 | 11 | 665 | 147 | | | Chr | 12 | NC_006594.3 | CM000012.3 | 72.5 | 0.0 | 625 | - | 3 | 6 | 700 | 152 | | | Chr | 13 | NC_006595.3 | CM000013.3 | 63.24 | 0.0 | 405 | - | 3 | 7 | 480 | 120 | | | Chr | 14 | NC_006596.3 | CM000014.3 | 60.97 | 0.0 | 434 | - | 5 | 13 | 517 | 149 | | | Chr | 15 | NC_006597.3 | CM000015.3 | 64.19 | 0.0 | 546 | - | 12 | 6 | 592 | 121 | | | Chr | 16 | NC_006598.3 | CM000016.3 | 59.63 | 0.0 | 445 | - | 16 | 9 | 526 | 118 | | | Chr | 17 | NC_006599.3 | CM000017.3 | 64.29 | 0.0 | 681 | - | 31 | 4 | 711 | 114 | | | Chr | 18 | NC_006600.3 | CM000018.3 | 55.84 | 0.0 | 850 | - | 10 | 10 | 910 | 138 | | | Chr | 19 | NC_006601.3 | CM000019.3 | 53.74 | 0.0 | 180 | - | 2 | 3 | 249 | 85 | | | Chr | 20 | NC_006602.3 | CM000020.3 | 58.13 | 0.0 | 1,074 | - | 6 | 10 | 1,074 | 121 | | | Chr | 21 | NC_006603.3 | CM000021.3 | 50.86 | 0.0 | 548 | - | 3 | 5 | 668 | 173 | | | Chr | 22 | NC_006604.3 | CM000022.3 | 61.44 | 0.0 | 225 | - | 4 | 13 | 345 | 137 | | | Chr | 23 | NC_006605.3 | CM000023.3 | 52.29 | 0.0 | 384 | - | 3 | 7 | 424 | 113 | | | Chr | 24 | NC_006606.3 | CM000024.3 | 47.7 | 0.0 | 587 | - | 2 | 7 | 569 | 59 | | | Chr | 25 | NC_006607.3 | CM000025.3 | 51.63 | 0.0 | 433 | - | 4 | 8 | 502 | 116 | | | Chr | 26 | NC_006608.3 | CM000026.3 | 38.96 | 0.0 | 505 | - | 10 | 6 | 573 | 66 | | | Chr | 27 | NC_006609.3 | CM000027.3 | 45.88 | 0.0 | 593 | - | 3 | 4 | 661 | 136 | | | Chr | 28 | NC_006610.3 | CM000028.3 | 41.18 | 0.0 | 407 | - | - | 3 | 417 | 65 | | | Chr | 29 | NC_006611.3 | CM000029.3 | 41.85 | 0.0 | 216 | - | 5 | 3 | 283 | 93 | | | Chr | 30 | NC_006612.3 | CM000030.3 | 40.21 | 0.0 | 450 | - | 5 | 2 | 473 | 84 | | | Chr | 31 | NC_006613.3 | CM000031.3 | 39.9 | 0.0 | 246 | - | - | 3 | 300 | 76 | | | Chr | 32 | NC_006614.3 | CM000032.3 | 38.81 | 0.0 | 242 | - | - | 7 | 305 | 114 | | | Chr | 33 | NC_006615.3 | CM000033.3 | 31.38 | 0.0 | 236 | - | 2 | 5 | 261 | 53 | | | Chr | 34 | NC_006616.3 | CM000034.3 | 42.12 | 0.0 | 264 | - | 2 | 5 | 283 | 60 | | | Chr | 35 | NC_006617.3 | CM000035.3 | 26.53 | 0.0 | 239 | - | 102 | 3 | 307 | 80 | | | Chr | 36 | NC_006618.3 | CM000036.3 | 30.81 | 0.0 | 179 | - | 2 | 2 | 219 | 64 | | | Chr | 37 | NC_006619.3 | CM000037.3 | 30.9 | 0.0 | 258 | - | 3 | 5 | 262 | 43 | | | Chr | 38 | NC_006620.3 | CM000038.3 | 23.91 | 0.0 | 244 | - | 28 | 4 | 273 | 58 | | | Chr | X | NC_006621.3 | CM000039.3 | 123.87 | 0.0 | 905 | - | 6 | 20 | 1,188 | 437 | | | Chr | MT | NC_002008.4 | U96639.2 | 0.016727 | 39.7 | 13 | 2 | 22 | - | 13 | - | | | Un | - | . | - | 83.33 | 49.3 | 261 | - | 2 | 22 | 396 | 119 | |
Click on chromosome name to open MapViewer  Chromosomes [1]  Scaffolds or contigs [2]  SRA or Traces [1]  No data [1] |
| Epigenomics | 1 | | Map | 2 | | Targeted Locus (Loci) | 1 | | Transcriptome or Gene expression | 83 | | Variation | 3 |
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