Heterobasidion irregulare
Representative genome: Heterobasidion irregulare TC 32-1 (assembly Heterobasidion irregulare v2.0)
Download sequences in FASTA format for genome, transcript, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Heterobasidion irregulare genome

Display Settings:

Format

Send to:

Choose Destination
ID: 14030
Organism ImageHeterobasidion irregulare

Root rot fungus of conifers

Lineage: Eukaryota[1568]; Fungi[578]; Dikarya[517]; Basidiomycota[135]; Agaricomycotina[88]; Agaricomycetes[70]; Russulales[3]; Bondarzewiaceae[2]; Heterobasidion[2]; Heterobasidion annosum species complex[2]; Heterobasidion irregulare[1]
A pathogen of coniferous forests with economical consequences. Formerly known as H. annosum North American P-type this fungus uses two ecological strategies for survival: parasitism and saprotrophic wood decay. This fungus is part of a species complex which comprises of three Eurasian and two North American species (includes H. irregulare), each with More...

Summary

Submitter: JGI
Definition:
Assembly level: Scaffold
Assembly: GCA_000320585.2 Heterobasidion irregulare v2.0 scaffolds: 15 contigs: 18 N50: 2,301,032 L50: 6
BioProjects: PRJNA245138, PRJNA46703
Whole Genome Shotgun (WGS): INSDC: AEOJ00000000.1
Statistics: total length (Mb): 33.65
 protein count: 13275
 GC%: 52.2

Genome Assembly Annotation

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein Gene Pseudogene
master WGS-AEOJ00000000.133.6552.213,27513,2721

Other BioProjects

Transcriptome or Gene expression1

Supplemental Content

Tools

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Write to the Help Desk