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Salmonella enterica
Reference genome: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Download sequences in FASTA format for genome, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Salmonella enterica genome, protein
All 1113 genomes for species:
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Download sequence and annotation from RefSeq or GenBank
ID: 152
Organism ImageSalmonella enterica

Causes enteric infections

Lineage: Bacteria[5431]; Proteobacteria[2148]; Gammaproteobacteria[934]; Enterobacteriales[192]; Enterobacteriaceae[192]; Salmonella[2]; Salmonella enterica[1]
Salmonella. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. There are now two More...

Sequence data: genome assemblies: 1113; sequence reads: 447 (See  Genome Assembly and Annotation report)
 genome groups: 31 (See  Genome Groups report)

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 Representative (genome information for reference and representative genomes)

    Reference genomes: [see all organisms]

    • minus sign  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

      Human Pathogen

      Morphology: Gram:Negative, Shape:Bacilli, Motility:Yes

      Environment: OxygenReq:Facultative, OptimumTemperature:37, TemperatureRange:Mesophilic, Habitat:HostAssociated

      Phenotype: Disease:Gastroenteritis and food poisoning

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_003197.1AE006468.14.8652.24,4512286104,63154
      PlsmpSLTNC_003277.1AE006471.10.09393953.1102--1112-

    • minus sign  Salmonella enterica subsp. enterica serovar Typhi str. CT18

      Submitter: Sanger Institute

      Human Pathogen

      Morphology: Gram:Negative, Shape:Bacilli, Motility:Yes

      Environment: OxygenReq:Facultative, OptimumTemperature:37, TemperatureRange:Mesophilic, Habitat:HostAssociated

      Phenotype: Disease:Typhoid fever

      Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene
      Chr-NC_003198.1AL513382.14.8152.14,111227994,455233
      PlsmpHCM1NC_003384.1AL513383.10.2181647.6235---24610
      PlsmpHCM2NC_003385.1AL513384.10.10651650.6128-1-129-

Dendrogram (based on genomic BLAST)

Other BioProjects

Genome Sequencing, no data466
Epigenomics10
Other116
Proteome1
Random survey16
Raw sequence reads5
Targeted Locus (Loci)6
Transcriptome or Gene expression137
Variation21

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