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UniSTS:91793 Links
RH25390
Homo sapiens loci KIAA0174 and LOC728533
Macaca mulatta chromosome 20;11, loci LOC709385, KIAA0174, and LOC707143
Pan troglodytes loci LOC745404 and LOC456001

Found by e-PCR in sequences from Homo sapiens, Macaca fascicularis, Macaca mulatta, Macaca nemestrina, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:TGGATGGATGGGACTCTTATG
Reverse primer:GTATCATCCAATCCCAAAGCC
PCR product size:99 (bp), Homo sapiens

   Homo sapiens
Warning! This marker matched more than 2 locations on genome by e-PCR and therefore excluded from annotation.
Name: RH25390
Polymorphism info:  

Cross References Help
Gene GeneID:728533
 Symbol:LOC728533
 Description:similar to CG10103
 Position:19q13.12
Gene GeneID:9798
 Symbol:KIAA0174
 Description:KIAA0174
 Position:16q22.2
UniGeneHs.232194 KIAA0174
 Hs.651115 Transcribed locus, strongly similar to NP_001017454.1 hypothetical protein L...


Electronic PCR results Help
RefSeq mRNA (4)
NM_014761.2 2134 .. 2232 (99 bp)  
XR_015610.3 1881 .. 1978 (98 bp)  
XR_019503.3 1881 .. 1978 (98 bp)  
XR_038917.2 1881 .. 1978 (98 bp)  
 
mRNA (5 of 8)[Show All Hits]
D79996.1 2133 .. 2231 (99 bp)  
AL355695.1 1186 .. 1284 (99 bp)  
BC000116.1 2035 .. 2133 (99 bp)  
BC004359.1 2134 .. 2232 (99 bp)  
AK057902.1 2151 .. 2249 (99 bp)  
 
Genomic RefSeqs (5 of 18)[Show All Hits]
NT_010498.15 25576890 .. 25576988 (99 bp)  
NW_925395.1 3334063 .. 3334160 (98 bp)  
NW_926517.1 768745 .. 768843 (99 bp)  
NW_927217.1 491602 .. 491699 (98 bp)  
AC_000055.1 55710234 .. 55710331 (98 bp)  
 
Genomic (5)
G06036.1 118 .. 216 (99 bp)  
AC007676.19 123955 .. 124052 (98 bp)  
AC009779.18 73119 .. 73216 (98 bp)  
AC016582.9 55072 .. 55169 (98 bp)  
AC009127.10 83498 .. 83596 (99 bp)  
 
ESTs (5 of 201)[Show All Hits]
T06627.1 115 .. 213 (99 bp)  
T17335.1 120 .. 218 (99 bp)  
Z38301.1 118 .. 216 (99 bp)  
T32093.1 118 .. 216 (99 bp)  
T33794.1 120 .. 218 (99 bp)  
 
Whole Genome Shotgun sequences (5 of 14)[Show All Hits]
AADD01165228.1 15446 .. 15543 (98 bp)  
AADD01149895.1 1132 .. 1230 (99 bp)  
AADD01124344.1 8054 .. 8151 (98 bp)  
AADC01139088.1 29682 .. 29779 (98 bp)  
AADC01126848.1 15886 .. 15984 (99 bp)  
 
Patent sequences (5 of 23)[Show All Hits]
BD186186.1 2109 .. 2207 (99 bp)  
BD186187.1 1339 .. 1437 (99 bp)  
BD186188.1 2167 .. 2265 (99 bp)  
BD190288.1 2133 .. 2231 (99 bp)  
BD190290.1 1339 .. 1437 (99 bp)  
 
High Thoughput cDNA sequences (4)
CR592890.1 1440 .. 1538 (99 bp)  
CR608887.1 1629 .. 1727 (99 bp)  
CR623090.1 1845 .. 1943 (99 bp)  
BC006261.1 2946 .. 3044 (99 bp)  
 

   Macaca fascicularis
 
Polymorphism info:  

Cross References Help
UniGeneMfa.2972 Brain cDNA clone: QbsB-10942, similar to human LOC400545 (LOC400545), mRNA, ...


Electronic PCR results Help
mRNA (2)
AB170236.1 1473 .. 1570 (98 bp)  
AB174309.1 1615 .. 1712 (98 bp)  
 

   Macaca mulatta
Name: RH25390
Polymorphism info:  

Cross References Help
Gene GeneID:707143
 Symbol:LOC707143
 Description:similar to polycystic kidney disease 1 like 3
 Position: 
Gene GeneID:707245
 Symbol:KIAA0174
 Description:KIAA0174
 Position: 
Gene GeneID:709385
 Symbol:LOC709385
 Description:similar to protein kinase, interferon-inducible double stranded RNA dependent activator
 Position: 
UniGeneMmu.13031 KIAA0174

Mapping InformationHelp
RH25390 Sequence Map: Chr 11 Map Viewer
  Position: 52717181-52717278 (bp)
 
RH25390 Sequence Map: Chr 20 Map Viewer
  Position: 70722595-70722692 (bp)

Electronic PCR results Help
RefSeq mRNA (5 of 6)[Show All Hits]
XM_001104896.1 1506 .. 1603 (98 bp)  
XM_001105424.1 2176 .. 2273 (98 bp)  
XM_001105348.1 2134 .. 2231 (98 bp)  
XM_001105281.1 2083 .. 2180 (98 bp)  
XM_001105049.1 2271 .. 2368 (98 bp)  
 
Genomic RefSeqs (2)
NW_001096623.1 2123020 .. 2123117 (98 bp)  
NW_001111354.1 6804261 .. 6804358 (98 bp)  
 
Genomic (1)
AC197751.3 168987 .. 169084 (98 bp)  
 
ESTs (1)
CB310489.1 120 .. 217 (98 bp)  
 
Whole Genome Shotgun sequences (3)
AANU01281097.1 8894 .. 8991 (98 bp)  
AANU01177709.1 15282 .. 15379 (98 bp)  
AANU01101874.1 16337 .. 16435 (99 bp)  
 

   Macaca nemestrina
 
Polymorphism info:  

Electronic PCR results Help
ESTs (2)
DY751616.1 71 .. 168 (98 bp)  
EB526206.1 63 .. 160 (98 bp)  
 

   Pan troglodytes
Warning! This marker matched more than 2 locations on genome by e-PCR and therefore excluded from annotation.
 
Polymorphism info:  

Cross References Help
Gene GeneID:456001
 Symbol:LOC456001
 Description:similar to KIAA0174 protein
 Position: 
Gene GeneID:745404
 Symbol:LOC745404
 Description:similar to KIAA0174
 Position: 


Electronic PCR results Help
RefSeq mRNA (2)
XM_001151193.1 2481 .. 2579 (99 bp)  
XR_024948.1 2161 .. 2258 (98 bp)  
 
Genomic RefSeqs (3)
NW_001223153.1 12614806 .. 12614903 (98 bp)  
NW_001226058.1 1771067 .. 1771165 (99 bp)  
NW_001228224.1 2124464 .. 2124561 (98 bp)  
 
Genomic (1)
AC195070.2 127012 .. 127109 (98 bp)  
 
Whole Genome Shotgun sequences (5 of 6)[Show All Hits]
AADA01285054.1 2138 .. 2236 (99 bp)  
AADA01153961.1 2790 .. 2887 (98 bp)  
AADA01134282.1 6472 .. 6569 (98 bp)  
AACZ02184936.1 6657 .. 6754 (98 bp)  
AACZ02164143.1 2645 .. 2743 (99 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
RefSeq mRNA (1)
NM_001133078.1 2111 .. 2209 (99 bp)  
 
Whole Genome Shotgun sequences (3)
ABGA01245476.1 1980 .. 2077 (98 bp)  
ABGA01136350.1 3108 .. 3205 (98 bp)  
ABGA01043812.1 1833 .. 1931 (99 bp)  
 
High Thoughput cDNA sequences (1)
CR860522.1 2111 .. 2209 (99 bp)  
 

 

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