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Bos taurus
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UniSTS:89968 Links
RH93739
Bos taurus chromosome 19, locus PTRH2
Equus caballus chromosome 17;11, loci LOC100071096 and LOC100064705
Homo sapiens chromosome 17, locus PTRH2
Pan troglodytes chromosome 17, locus LOC455170

Found by e-PCR in sequences from Bos sp., Bos taurus, Cavia porcellus, Equus caballus, Felis catus, Homo sapiens, Lama pacos, Ovis aries, Pan troglodytes, Pongo abelii and Sus scrofa.

Primer InformationHelp

Forward primer:GTCCCAGCATTTTTGCATG
Reverse primer:GCCCAGTGCTCTCATGCT
PCR product size:163 (bp), Homo sapiens

   Bos sp.
 
Polymorphism info:  

Electronic PCR results Help
ESTs (1)
AM030328.1 67 .. 229 (163 bp)  
 

   Bos taurus
Name: RH93739
Polymorphism info:  

Cross References Help
Gene GeneID:516595
 Symbol:PTRH2
 Description:peptidyl-tRNA hydrolase 2
 Position: 
UniGeneBt.59316 Peptidyl-tRNA hydrolase 2

Mapping InformationHelp
RH93739 Sequence Map: Chr 19 Map Viewer
  Position: 9911144-9911306 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
NM_001034519.1 482 .. 644 (163 bp)  
 
mRNA (3)
BT021191.1 482 .. 644 (163 bp)  
BC103230.1 312 .. 474 (163 bp)  
AB238942.1 250 .. 412 (163 bp)  
 
Genomic RefSeqs (1)
NW_001493651.2 874669 .. 874831 (163 bp)  
 
Genomic (1)
DAAA02048339.1 17621 .. 17783 (163 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC169976.3 167268 .. 167430 (163 bp)  
 
ESTs (5 of 36)[Show All Hits]
BE663580.1 346 .. 508 (163 bp)  
BM255692.1 149 .. 311 (163 bp)  
BM258840.1 79 .. 241 (163 bp)  
CF931006.1 300 .. 462 (163 bp)  
CN434714.1 257 .. 419 (163 bp)  
 
Whole Genome Shotgun sequences (1)
AAFC03020784.1 42147 .. 42309 (163 bp)  
 

   Cavia porcellus
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
AAKN02033032.1 81004 .. 81166 (163 bp)  
 

   Equus caballus
Name: RH93739
Polymorphism info:  

Cross References Help
Gene GeneID:100064705
 Symbol:LOC100064705
 Description:hypothetical LOC100064705
 Position: 
Gene GeneID:100071096
 Symbol:LOC100071096
 Description:similar to Bcl-2 inhibitor of transcription
 Position: 

Mapping InformationHelp
RH93739 Sequence Map: Chr 11 Map Viewer
  Position: 33730010-33730172 (bp)
 
RH93739 Sequence Map: Chr 17 Map Viewer
  Position: 39696187-39696347 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_001503741.1 250 .. 412 (163 bp)  
 
Genomic RefSeqs (2)
NW_001867366.1 32523477 .. 32523639 (163 bp)  
NW_001867383.1 21944962 .. 21945122 (161 bp)  
 
Whole Genome Shotgun sequences (2)
AAWR02012959.1 171699 .. 171861 (163 bp)  
AAWR02010790.1 22279 .. 22439 (161 bp)  
 

   Felis catus
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (2)
AANG01501550.1 932 .. 1094 (163 bp)  
ACBE01421508.1 2724 .. 2886 (163 bp)  
 

   Homo sapiens
Name: RH93739
Also known as: stSG50603
Polymorphism info:  

Cross References Help
Gene GeneID:51651
 Symbol:PTRH2
 Description:peptidyl-tRNA hydrolase 2
 Position:17q23.1
UniGeneHs.12677 Peptidyl-tRNA hydrolase 2

Mapping InformationHelp
RH93739 Sequence Map: Chr 17|HuRef Map Viewer
  Position: 53147591-53147753 (bp)
 
RH93739 Sequence Map: Chr 17|Celera Map Viewer
  Position: 54238679-54238841 (bp)
 
RH93739 Sequence Map: Chr 17 Map Viewer
  Position: 57774928-57775090 (bp)
 
stSG50603 GeneMap99-GB4 Map: Chr 17 Map Viewer
  Position: 377.58 (cR3000)
  Lod score: 0.88
  Reference Interval: D17S791-D17S794

Electronic PCR results Help
RefSeq mRNA (1)
NM_016077.3 375 .. 537 (163 bp)  
 
mRNA (5 of 6)[Show All Hits]
AF151905.1 377 .. 539 (163 bp)  
AL137322.1 243 .. 405 (163 bp)  
BC006807.1 288 .. 450 (163 bp)  
AK057033.1 1626 .. 1788 (163 bp)  
AK098219.1 1764 .. 1926 (163 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_926894.1 12169701 .. 12169863 (163 bp)  
AC_000060.1 54238679 .. 54238841 (163 bp)  
NW_001838449.1 123372 .. 123534 (163 bp)  
AC_000149.1 53147591 .. 53147753 (163 bp)  
NT_010783.15 23049080 .. 23049242 (163 bp)  
 
Genomic (3)
AC091271.8 18758 .. 18920 (163 bp)  
AC040904.4 55159 .. 55321 (163 bp)  
AY404115.1 250 .. 412 (163 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC074102.2 55292 .. 55454 (163 bp)  
 
ESTs (5 of 124)[Show All Hits]
T64979.1 255 .. 414 (160 bp)  
T88811.1 227 .. 400 (174 bp)  
N94348.1 267 .. 430 (164 bp)  
W69148.1 267 .. 430 (164 bp)  
W69273.1 81 .. 244 (164 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01155238.1 60039 .. 60201 (163 bp)  
AADC01131271.1 4451 .. 4613 (163 bp)  
AADB02018594.1 60027 .. 60189 (163 bp)  
ABBA01003171.1 57096 .. 57258 (163 bp)  
ABSL01067426.1 57096 .. 57258 (163 bp)  
 
Patent sequences (5 of 10)[Show All Hits]
BD063595.1 229 .. 391 (163 bp)  
BD063620.1 310 .. 472 (163 bp)  
BD109219.1 322 .. 484 (163 bp)  
AX714588.1 1626 .. 1788 (163 bp)  
AX970500.1 322 .. 484 (163 bp)  
 
High Thoughput cDNA sequences (1)
BC017457.1 1609 .. 1771 (163 bp)  
 

   Lama pacos
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABRR01209536.1 5505 .. 5667 (163 bp)  
 

   Ovis aries
 
Polymorphism info:  

Electronic PCR results Help
ESTs (3)
GO685126.1 462 .. 624 (163 bp)  
GO713797.1 265 .. 427 (163 bp)  
GO779246.1 484 .. 646 (163 bp)  
 

   Pan troglodytes
Name: RH93739
Polymorphism info:  

Cross References Help
Gene GeneID:455170
 Symbol:LOC455170
 Description:hypothetical LOC455170
 Position: 

Mapping InformationHelp
RH93739 Sequence Map: Chr 17 Map Viewer
  Position: 58900478-58900640 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XR_022917.1 3701 .. 3863 (163 bp)  
 
Genomic RefSeqs (1)
NW_001226991.1 433129 .. 433291 (163 bp)  
 
Genomic (1)
AY404116.1 250 .. 412 (163 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01066859.1 1855 .. 2017 (163 bp)  
AACZ02172134.1 53387 .. 53549 (163 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01152269.1 19512 .. 19674 (163 bp)  
 

   Sus scrofa
 
Polymorphism info:  

Cross References Help
UniGeneSsc.3596 Transcribed locus, strongly similar to NP_001029691.1 Bcl-2 inhibitor of tra...


Electronic PCR results Help
Working Draft phase 1 (from GenBank HTGS division) (1)
CU639474.2 116593 .. 116755 (163 bp)  
 
ESTs (5 of 23)[Show All Hits]
CF367358.1 307 .. 469 (163 bp)  
CF368761.1 220 .. 382 (163 bp)  
CK455114.1 283 .. 445 (163 bp)  
CK456162.1 227 .. 389 (163 bp)  
DN113773.1 285 .. 447 (163 bp)  
 
High Thoughput cDNA sequences (1)
AY609613.1 794 .. 956 (163 bp)  
 

 

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