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UniSTS:89511 Links
RH91787
Homo sapiens chromosome 15, loci NIPA2 and CYFIP1
Macaca mulatta chromosome 7, locus LOC710147
Pan troglodytes chromosome 15, locus NIPA2

Found by e-PCR in sequences from Homo sapiens, Macaca mulatta, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:GGCCCAAAGGAGCTCTTAAG
Reverse primer:TTAGACTTTGAACAGCTCTGGG
PCR product size:184 (bp), Homo sapiens

   Homo sapiens
Name: RH91787
Also known as: stSG45529
Polymorphism info:  

Cross References Help
Gene GeneID:23191
 Symbol:CYFIP1
 Description:cytoplasmic FMR1 interacting protein 1
 Position:15q11
Gene GeneID:81614
 Symbol:NIPA2
 Description:non imprinted in Prader-Willi/Angelman syndrome 2
 Position:15q11.2
UniGeneHs.26704 Cytoplasmic FMR1 interacting protein 1
 Hs.591003 Non imprinted in Prader-Willi/Angelman syndrome 2

Mapping InformationHelp
RH91787 Sequence Map: Chr 15|HuRef Map Viewer
  Position: 1317630-1317813 (bp)
 
RH91787 Sequence Map: Chr 15|Celera Map Viewer
  Position: 1374382-1374565 (bp)
 
RH91787 Sequence Map: Chr 15 Map Viewer
  Position: 23005247-23005430 (bp)
 
stSG45529 GeneMap99-GB4 Map: Chr 15 Map Viewer
  Position: 19.24 (cR3000)
  Lod score: 2.36
  Reference Interval: pTEL-D15S122

Electronic PCR results Help
mRNA (2)
AK127094.1 4978 .. 5162 (185 bp)  
AY763579.1 4978 .. 5162 (185 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_925761.1 92836 .. 93019 (184 bp)  
AC_000058.1 1374382 .. 1374565 (184 bp)  
AC_000147.1 1317630 .. 1317813 (184 bp)  
NW_001838191.2 317634 .. 317817 (184 bp)  
NT_078094.2 359054 .. 359237 (184 bp)  
 
Genomic (3)
G11828.1 107 .. 290 (184 bp)  
AC016204.12 33058 .. 33241 (184 bp)  
AC011767.12 32024 .. 32207 (184 bp)  
 
ESTs (5 of 17)[Show All Hits]
Z39245.1 107 .. 290 (184 bp)  
T66278.1 280 .. 468 (189 bp)  
R56244.1 119 .. 302 (184 bp)  
AI085918.1 116 .. 300 (185 bp)  
AI491861.1 111 .. 295 (185 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01141596.1 2454 .. 2638 (185 bp)  
AADC01118922.1 8639 .. 8823 (185 bp)  
AADB02016226.1 13085 .. 13268 (184 bp)  
ABBA01040251.1 2170 .. 2353 (184 bp)  
ABSL01063480.1 2171 .. 2355 (185 bp)  
 
Patent sequences (4)
AX780127.1 2221 .. 2405 (185 bp)  
CQ850015.1 4978 .. 5162 (185 bp)  
CQ855169.1 2140 .. 2323 (184 bp)  
DL210638.1 4978 .. 5162 (185 bp)  
 

   Macaca mulatta
Name: RH91787
Polymorphism info:  

Cross References Help
Gene GeneID:710147
 Symbol:LOC710147
 Description:similar to non imprinted in Prader-Willi/Angelman syndrome 2 isoform a
 Position: 
UniGeneMmu.13329 Similar to non imprinted in Prader-Willi/Angelman syndrome 2 isoform a

Mapping InformationHelp
RH91787 Sequence Map: Chr 7 Map Viewer
  Position: 1784377-1784556 (bp)

Electronic PCR results Help
RefSeq mRNA (5)
XM_001106072.1 2454 .. 2633 (180 bp)  
XM_001106137.1 2360 .. 2539 (180 bp)  
XM_001106204.1 2475 .. 2654 (180 bp)  
XM_001106265.1 2220 .. 2399 (180 bp)  
XM_001105995.1 2148 .. 2327 (180 bp)  
 
Genomic RefSeqs (1)
NW_001121136.1 237838 .. 238017 (180 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01129034.1 7792 .. 7971 (180 bp)  
 

   Pan troglodytes
Name: RH91787
Polymorphism info:  

Cross References Help
Gene GeneID:453275
 Symbol:NIPA2
 Description:non imprinted in Prader-Willi/Angelman syndrome 2
 Position: 

Mapping InformationHelp
RH91787 Sequence Map: Chr 15 Map Viewer
  Position: 20582579-20582764 (bp)

Electronic PCR results Help
RefSeq mRNA (5 of 14)[Show All Hits]
XM_001158930.1 2242 .. 2427 (186 bp)  
XM_001158981.1 2182 .. 2367 (186 bp)  
XM_001159024.1 2469 .. 2654 (186 bp)  
XM_001159070.1 2324 .. 2509 (186 bp)  
XM_510259.2 2466 .. 2651 (186 bp)  
 
Genomic RefSeqs (1)
NW_001225210.1 270502 .. 270687 (186 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01290233.1 15416 .. 15601 (186 bp)  
AACZ02153306.1 30421 .. 30606 (186 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01080819.1 10284 .. 10477 (194 bp)  
 

 

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