ncbi logo
UniSTS logo
 PubMed  Entrez  BLAST  OMIM  Taxonomy  Structure
  Search for

Entrez UniSTS
Help
Query tips
Submit
Submit map
FTP site
Statistics

Related sites
e-PCR
Map Viewer
Gene
UniGene
dbSNP
GeneMap'99
MGD
ZFIN

Genomic biology
Bos taurus
Canis familiaris
Danio rerio
Homo sapiens
Mus musculus
Rattus novegicus
Sus scrofa

UniSTS:74334 Links
RH66311
Homo sapiens chromosome 7, locus SCRN1
Macaca mulatta chromosome 3, locus SCRN1
Pan troglodytes chromosome 7, locus SCRN1

Found by e-PCR in sequences from Homo sapiens, Macaca mulatta, Macaca nemestrina, Pan troglodytes, Papio anubis and Pongo abelii.

Primer InformationHelp

Forward primer:TGGTTCCCACGAGAAATCT
Reverse primer:GTAGCCGTGGCTTTTCATT
PCR product size:130 (bp), Homo sapiens

   Homo sapiens
Name: RH66311
Also known as: stSG35336
Polymorphism info:  

Cross References Help
Gene GeneID:9805
 Symbol:SCRN1
 Description:secernin 1
 Position:7p14.3-p14.1
UniGeneHs.520740 Secernin 1
 Hs.601501 Transcribed locus

Mapping InformationHelp
RH66311 Sequence Map: Chr 7|HuRef Map Viewer
  Position: 29841651-29841780 (bp)
 
RH66311 Sequence Map: Chr 7|Celera Map Viewer
  Position: 29949355-29949484 (bp)
 
RH66311 Sequence Map: Chr 7 Map Viewer
  Position: 29959967-29960096 (bp)
 
RH66311 Sequence Map: Chr 7|CRA_TCAGchr7v2 Map Viewer
  Position: 30009790-30009919 (bp)
 
stSG35336 NCBI RH Map: Chr 7 Map Viewer
  Position: 499.1 (cR)
  Lod score: 1.19
 
stSG35336 GeneMap99-GB4 Map: Chr 7 Map Viewer
  Position: 150.63 (cR3000)
  Lod score: 0.86
  Reference Interval: D7S529-D7S484

Electronic PCR results Help
RefSeq mRNA (4)
NM_014766.4 4891 .. 5020 (130 bp)  
NM_001145514.1 4831 .. 4960 (130 bp)  
NM_001145515.1 4731 .. 4860 (130 bp)  
NM_001145513.1 4899 .. 5028 (130 bp)  
 
mRNA (4)
G31727.1 241 .. 370 (130 bp)  
D83777.2 4834 .. 4963 (130 bp)  
BC040492.1 4843 .. 4972 (130 bp)  
AB071705.1 4781 .. 4910 (130 bp)  
 
Genomic RefSeqs (5 of 8)[Show All Hits]
NW_923240.1 23120220 .. 23120349 (130 bp)  
NT_079592.2 29959790 .. 29959919 (130 bp)  
AC_000050.1 29949355 .. 29949484 (130 bp)  
AC_000068.1 30009790 .. 30009919 (130 bp)  
NW_001839003.1 23684876 .. 23685005 (130 bp)  
 
Genomic (1)
AC004912.2 115825 .. 115954 (130 bp)  
 
ESTs (5 of 124)[Show All Hits]
T03756.1 241 .. 370 (130 bp)  
T34787.1 140 .. 269 (130 bp)  
H42999.1 227 .. 356 (130 bp)  
D51086.1 77 .. 206 (130 bp)  
N24779.1 241 .. 370 (130 bp)  
 
Whole Genome Shotgun sequences (5 of 6)[Show All Hits]
AADD01079720.1 34825 .. 34954 (130 bp)  
AADC01067024.1 131520 .. 131649 (130 bp)  
AACC02000087.1 2744485 .. 2744614 (130 bp)  
AADB02010433.1 2155005 .. 2155134 (130 bp)  
ABBA01056806.1 36047 .. 36176 (130 bp)  
 
Patent sequences (5 of 14)[Show All Hits]
AX329597.1 4870 .. 4999 (130 bp)  
BD186742.1 219 .. 348 (130 bp)  
AX779891.1 4870 .. 4999 (130 bp)  
AX961980.1 4781 .. 4910 (130 bp)  
CQ711122.1 119 .. 248 (130 bp)  
 

   Macaca mulatta
Name: RH66311
Polymorphism info:  

Cross References Help
Gene GeneID:696370
 Symbol:SCRN1
 Description:secernin 1
 Position: 
UniGeneMmu.14591 Secernin 1

Mapping InformationHelp
RH66311 Sequence Map: Chr 3 Map Viewer
  Position: 96285189-96285325 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_001086756.1 4733 .. 4869 (137 bp)  
XM_001086879.1 5130 .. 5266 (137 bp)  
XM_001086984.1 4833 .. 4969 (137 bp)  
 
Genomic RefSeqs (1)
NW_001114275.1 223850 .. 223986 (137 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01125620.1 5830 .. 5966 (137 bp)  
 
High Thoughput cDNA sequences (1)
DQ148166.1 120 .. 256 (137 bp)  
 

   Macaca nemestrina
 
Polymorphism info:  

Electronic PCR results Help
ESTs (2)
EB525636.1 32 .. 168 (137 bp)  
EB528951.1 55 .. 191 (137 bp)  
 

   Pan troglodytes
Name: RH66311
Polymorphism info:  

Cross References Help
Gene GeneID:463323
 Symbol:SCRN1
 Description:secernin 1
 Position: 

Mapping InformationHelp
RH66311 Sequence Map: Chr 7 Map Viewer
  Position: 30287488-30287617 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_519021.2 4841 .. 4970 (130 bp)  
 
Genomic RefSeqs (1)
NW_001237933.1 23402302 .. 23402431 (130 bp)  
 
Genomic (1)
AC187736.3 167851 .. 167980 (130 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC146158.1 157791 .. 157920 (130 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (2)
AC091622.2 37230 .. 37359 (130 bp)  
AC094110.2 116253 .. 116382 (130 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01257094.1 4413 .. 4542 (130 bp)  
AACZ02082051.1 71656 .. 71785 (130 bp)  
 

   Papio anubis
 
Polymorphism info:  

Electronic PCR results Help
Genomic (2)
AC091713.4 211892 .. 212028 (137 bp)  
AC097004.3 78761 .. 78897 (137 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01275414.1 15840 .. 15969 (130 bp)  
 

 

Questions or Comments?
Write to the NCBI Service Desk

Disclaimer   Privacy statement