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UniSTS:71306 Links
D2S441
Homo sapiens chromosome 2, loci SOS1, SLEP2, and PARK3
Pan troglodytes chromosome 2A

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:TGCACCCAACATTCTAACAA
Reverse primer:ATTGGAGCTAAGTGGCTGTG
PCR product size:163-164 (bp), Homo sapiens
GenBank Accession:G08184

   Homo sapiens
Name: D2S441
Also known as: CHLC.GATA72A05 CHLC.GATA72A05.P18038 D2S1778 G00-455-905 GATA-P18038 GATA72A05 GDB:685593 SHGC-17731
Polymorphism info:  

Cross References Help
Gene GeneID:5072
 Symbol:PARK3
 Description:Parkinson disease (autosomal dominant, Lewy body) 3
 Position:2p13
Gene GeneID:544631
 Symbol:SLEP2
 Description:Serum leptin concentration QTL 2
 Position: 
Gene GeneID:6654
 Symbol:SOS1
 Description:son of sevenless homolog 1 (Drosophila)
 Position:2p22-p21

Mapping InformationHelp
D2S441 Sequence Map: Chr 2|HuRef Map Viewer
  Position: 67976019-67976170 (bp)
 
D2S441 Sequence Map: Chr 2|Celera Map Viewer
  Position: 68088620-68088775 (bp)
 
D2S441 Sequence Map: Chr 2 Map Viewer
  Position: 68238998-68239157 (bp)
 
SHGC-17731 NCBI RH Map: Chr 2 Map Viewer
  Position: 386.9 (cR)
  Lod score: 1.89
 
SHGC-17731 TNG Map: Chr 2 Map Viewer
  Position: 43201 (cR50000)
  Lod score: 11.3
  Reference Interval: 132
 
SHGC-17731 Stanford-G3 Map: Chr 2 Map Viewer
  Position: 2806 (cR10000)
  Lod score: F
  Reference Interval: 39
 
CHLC.GATA72A05 Whitehead-RH Map: Chr 2 Map Viewer
  Position: 283.1 (cR3000)
  Lod score: F
 
CHLC.GATA72A05 Whitehead-YAC Map: Chr 2 Map Viewer
  Position: 271 (ordinal)
  Reference Interval: WC2.4

Electronic PCR results Help
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_927719.1 68020555 .. 68020710 (156 bp)  
AC_000045.1 68088620 .. 68088775 (156 bp)  
NW_001838769.1 38072263 .. 38072414 (152 bp)  
AC_000134.1 67976019 .. 67976170 (152 bp)  
NT_022184.15 47060885 .. 47061044 (160 bp)  
 
Genomic (4)
G08184.1 47 .. 210 (164 bp)  
G08185.1 4 .. 167 (164 bp)  
G08191.1 144 .. 307 (164 bp)  
AC079112.4 85265 .. 85424 (160 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01019011.1 1300 .. 1455 (156 bp)  
AADB02001783.1 423882 .. 424037 (156 bp)  
ABBA01075473.1 89932 .. 90083 (152 bp)  
ABKV01087670.1 45 .. 212 (168 bp)  
ABSL01003625.1 89940 .. 90091 (152 bp)  
 
Patent sequences (1)
DJ450553.1 1 .. 160 (160 bp)  
 

   Pan troglodytes
Name: D2S441
Polymorphism info:  
Mapping InformationHelp
D2S441 Sequence Map: Chr 2A Map Viewer
  Position: 69502613-69502769 (bp)

Electronic PCR results Help
Genomic RefSeqs (1)
NW_001231260.1 29926962 .. 29927118 (157 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01045246.1 9211 .. 9367 (157 bp)  
AACZ02021702.1 21701 .. 21857 (157 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01347569.1 24362 .. 24525 (164 bp)  
 

 

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