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UniSTS:65473 Links
G30318
Homo sapiens chromosome 6, locus VTA1
Pan troglodytes chromosome 6, locus VTA1

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:TCATCTGTTTGTCCAAACATTACA
Reverse primer:TGAAAACACACCTCTATAAAATGTG
PCR product size:100 (bp), Homo sapiens
GenBank Accession:G30318

   Homo sapiens
Name: G30318
Also known as: SHGC-36759
Polymorphism info:  

Cross References Help
Gene GeneID:51534
 Symbol:VTA1
 Description:Vps20-associated 1 homolog (S. cerevisiae)
 Position:6q24.1
UniGeneHs.431367 Vps20-associated 1 homolog (S. cerevisiae)
 Hs.595041 Transcribed locus

Mapping InformationHelp
G30318 Sequence Map: Chr 6|HuRef Map Viewer
  Position: 140106066-140106165 (bp)
 
G30318 Sequence Map: Chr 6 Map Viewer
  Position: 142540051-142540150 (bp)
 
G30318 Sequence Map: Chr 6|Celera Map Viewer
  Position: 143280530-143280629 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
NM_016485.3 1210 .. 1309 (100 bp)  
 
mRNA (5 of 10)[Show All Hits]
AK000051.1 1210 .. 1310 (101 bp)  
AF271994.1 1210 .. 1309 (100 bp)  
AY007093.1 1025 .. 1124 (100 bp)  
AF060225.1 1211 .. 1310 (100 bp)  
BC005937.1 1116 .. 1215 (100 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_923184.1 75349134 .. 75349233 (100 bp)  
AC_000049.1 143280530 .. 143280629 (100 bp)  
AC_000138.1 140106066 .. 140106165 (100 bp)  
NW_001838990.2 15016733 .. 15016832 (100 bp)  
NT_025741.15 46709508 .. 46709607 (100 bp)  
 
Genomic (2)
G30318.1 73 .. 172 (100 bp)  
AL033522.1 109728 .. 109827 (100 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (2)
AL355489.6 104013 .. 104112 (100 bp)  
AC090439.8 26134 .. 26233 (100 bp)  
 
ESTs (5 of 64)[Show All Hits]
Z41629.1 59 .. 158 (100 bp)  
T35829.1 31 .. 130 (100 bp)  
T35868.1 31 .. 130 (100 bp)  
T35882.1 31 .. 130 (100 bp)  
R38412.1 73 .. 172 (100 bp)  
 
Whole Genome Shotgun sequences (5 of 6)[Show All Hits]
AADD01075698.1 1332 .. 1431 (100 bp)  
AADC01064570.1 110459 .. 110558 (100 bp)  
AADB02190282.1 449 .. 548 (100 bp)  
AADB02010193.1 1930813 .. 1930912 (100 bp)  
ABBA01025757.1 586051 .. 586150 (100 bp)  
 
Patent sequences (1)
DD388104.1 934 .. 1033 (100 bp)  
 
High Thoughput cDNA sequences (4)
AF151062.1 1218 .. 1317 (100 bp)  
AL136684.1 1214 .. 1313 (100 bp)  
BC013217.1 714 .. 813 (100 bp)  
CR606694.1 1278 .. 1377 (100 bp)  
 

   Pan troglodytes
Name: G30318
Polymorphism info:  

Cross References Help
Gene GeneID:463033
 Symbol:VTA1
 Description:Vps20-associated 1 homolog (S. cerevisiae)
 Position: 

Mapping InformationHelp
G30318 Sequence Map: Chr 6 Map Viewer
  Position: 144695092-144695191 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_518771.2 1401 .. 1500 (100 bp)  
XM_001172031.1 1404 .. 1503 (100 bp)  
XM_001172055.1 1320 .. 1419 (100 bp)  
 
Genomic RefSeqs (1)
NW_001236564.1 36902711 .. 36902810 (100 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01069970.1 4832 .. 4931 (100 bp)  
AACZ02076274.1 4997 .. 5096 (100 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
RefSeq mRNA (1)
NM_001133194.1 1245 .. 1344 (100 bp)  
 
Whole Genome Shotgun sequences (1)
ABGA01221140.1 5643 .. 5741 (99 bp)  
 
High Thoughput cDNA sequences (1)
CR860737.1 1245 .. 1344 (100 bp)  
 

 

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