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UniSTS:6525 Links
WI-18234
Homo sapiens chromosome 6, loci FAM46A and LOC100134123
Macaca mulatta chromosome 4, locus LOC693306
Pan troglodytes chromosome 6, locus LOC462847

Found by e-PCR in sequences from Homo sapiens, Macaca mulatta, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:AATTCCATCTTAAAAGAAACTTTCC
Reverse primer:CAAAAAAAGAGAGACCTGTCATTAG
PCR product size:150 (bp), Homo sapiens
GenBank Accession:H65844

   Homo sapiens
Name: WI-18234
Also known as: EST367432
Polymorphism info:  

Cross References Help
Gene GeneID:100134123
 Symbol:LOC100134123
 Description:hypothetical protein LOC100134123
 Position: 
Gene GeneID:55603
 Symbol:FAM46A
 Description:family with sequence similarity 46, member A
 Position:6q14
UniGeneHs.10784 Family with sequence similarity 46, member A

Mapping InformationHelp
WI-18234 Sequence Map: Chr 6|HuRef Map Viewer
  Position: 79676510-79676658 (bp)
 
WI-18234 Sequence Map: Chr 6 Map Viewer
  Position: 82459024-82459172 (bp)
 
WI-18234 Sequence Map: Chr 6|Celera Map Viewer
  Position: 82881920-82882068 (bp)
 
WI-18234 Whitehead-RH Map: Chr 6 Map Viewer
  Position: 539.3 (cR3000)
  Lod score: P1.57
 
WI-18234 GeneMap99-GB4 Map: Chr 6 Map Viewer
  Position: 364.91 (cR3000)
  Lod score: 1.27
  Reference Interval: D6S445-D6S1644

Electronic PCR results Help
RefSeq mRNA (1)
NM_017633.2 1887 .. 2035 (149 bp)  
 
mRNA (2)
AF350451.1 1848 .. 1996 (149 bp)  
BX648876.1 1538 .. 1686 (149 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_923184.1 14950524 .. 14950672 (149 bp)  
AC_000049.1 82881920 .. 82882068 (149 bp)  
NW_001838987.1 11854712 .. 11854860 (149 bp)  
AC_000138.1 79676510 .. 79676658 (149 bp)  
NT_007299.13 20578858 .. 20579006 (149 bp)  
 
Genomic (2)
AL078599.19 55097 .. 55245 (149 bp)  
EI710191.1 35 .. 183 (149 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (1)
AL136316.6 732 .. 880 (149 bp)  
 
ESTs (5 of 7)[Show All Hits]
H65844.1 1 .. 150 (150 bp)  
AA305137.1 45 .. 193 (149 bp)  
AA704517.1 2 .. 151 (150 bp)  
AA706872.1 2 .. 151 (150 bp)  
AW952387.1 44 .. 192 (149 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01071681.1 1102 .. 1250 (149 bp)  
AADC01061472.1 83950 .. 84098 (149 bp)  
AADB02010112.1 510857 .. 511005 (149 bp)  
ABBA01040441.1 213682 .. 213830 (149 bp)  
ABSL01063606.1 213682 .. 213830 (149 bp)  
 

   Macaca mulatta
Name: WI-18234
Polymorphism info:  

Cross References Help
Gene GeneID:693306
 Symbol:LOC693306
 Description:similar to family with sequence similarity 46, member A
 Position: 

Mapping InformationHelp
WI-18234 Sequence Map: Chr 4 Map Viewer
  Position: 77785651-77785808 (bp)

Electronic PCR results Help
Genomic RefSeqs (1)
NW_001116512.1 524033 .. 524190 (158 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01244322.1 13436 .. 13593 (158 bp)  
 

   Pan troglodytes
Name: WI-18234
Polymorphism info:  

Cross References Help
Gene GeneID:462847
 Symbol:LOC462847
 Description:similar to chromosome 6 open reading frame 37
 Position: 

Mapping InformationHelp
WI-18234 Sequence Map: Chr 6 Map Viewer
  Position: 82850148-82850299 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_518605.2 1843 .. 1994 (152 bp)  
XM_001147967.1 1875 .. 2026 (152 bp)  
XM_001148042.1 2150 .. 2301 (152 bp)  
 
Genomic RefSeqs (1)
NW_001236562.1 14310465 .. 14310616 (152 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01233672.1 3535 .. 3686 (152 bp)  
AACZ02073288.1 31336 .. 31487 (152 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01075888.1 10683 .. 10834 (152 bp)  
 

 

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