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UniSTS:65110 Links
RH44489
Homo sapiens chromosome 12, locus ANKLE2
Pan troglodytes chromosome 12, loci LOC452390 and PGAM5

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TCAGGGCCAAAACGTTTTAC
Reverse primer:ACATGCTATTCTAAAAAGCCGC
PCR product size:160 (bp), Homo sapiens

   Homo sapiens
Name: RH44489
Also known as: stSG4731
Polymorphism info:  

Cross References Help
Gene GeneID:23141
 Symbol:ANKLE2
 Description:ankyrin repeat and LEM domain containing 2
 Position:12q24.33
UniGeneHs.654628 Ankyrin repeat and LEM domain containing 2
 Hs.666964 Transcribed locus

Mapping InformationHelp
RH44489 Sequence Map: Chr 12|HuRef Map Viewer
  Position: 130081523-130081682 (bp)
 
RH44489 Sequence Map: Chr 12|Celera Map Viewer
  Position: 133002795-133002954 (bp)
 
RH44489 Sequence Map: Chr 12 Map Viewer
  Position: 133302254-133302413 (bp)
 
stSG4731 GeneMap99-GB4 Map: Chr 12 Map Viewer
  Position: 504.68 (cR3000)
  Lod score: 0.69
  Reference Interval: D12S97-qTEL

Electronic PCR results Help
RefSeq mRNA (1)
NM_015114.1 4299 .. 4458 (160 bp)  
 
mRNA (4)
AB014592.1 3768 .. 3927 (160 bp)  
AK025933.1 2017 .. 2176 (160 bp)  
BC062373.1 2330 .. 2489 (160 bp)  
BC082962.1 2330 .. 2489 (160 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_925428.1 454899 .. 455058 (160 bp)  
AC_000055.1 133002795 .. 133002954 (160 bp)  
AC_000144.1 130081523 .. 130081682 (160 bp)  
NW_001838067.2 16994 .. 17153 (160 bp)  
NT_024477.14 495262 .. 495421 (160 bp)  
 
Genomic (2)
AC135586.8 23125 .. 23284 (160 bp)  
BV180587.1 4065 .. 4224 (160 bp)  
 
ESTs (5 of 38)[Show All Hits]
T89639.1 21 .. 180 (160 bp)  
T89733.1 19 .. 178 (160 bp)  
R43106.1 20 .. 179 (160 bp)  
R59085.1 19 .. 178 (160 bp)  
N94582.1 5 .. 164 (160 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01129574.1 2629 .. 2788 (160 bp)  
AADC01111222.1 1814 .. 1973 (160 bp)  
AADB02015899.1 2629 .. 2788 (160 bp)  
ABBA01012372.1 3536 .. 3695 (160 bp)  
ABSL01043710.1 3536 .. 3695 (160 bp)  
 
Patent sequences (4)
BD072970.1 1144 .. 1303 (160 bp)  
AX777327.1 3768 .. 3927 (160 bp)  
CQ920626.1 235 .. 394 (160 bp)  
CS382236.1 3768 .. 3927 (160 bp)  
 

   Pan troglodytes
Name: RH44489
Polymorphism info:  

Cross References Help
Gene GeneID:452388
 Symbol:PGAM5
 Description:phosphoglycerate mutase family member 5
 Position: 
Gene GeneID:452390
 Symbol:LOC452390
 Description:similar to KIAA0692 protein
 Position: 

Mapping InformationHelp
RH44489 Sequence Map: Chr 12 Map Viewer
  Position: 134852828-134852987 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_509500.2 4145 .. 4304 (160 bp)  
 
Genomic RefSeqs (1)
NW_001223211.1 67006 .. 67165 (160 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01233313.1 2997 .. 3156 (160 bp)  
AACZ02140037.1 4055 .. 4214 (160 bp)  
 

 

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