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UniSTS:59660 Links
RH66503
Homo sapiens chromosome 1, locus SCCPDH
Pan troglodytes chromosome 1, locus SCCPDH

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GTTTCCACATACACTCAGACAGGC
Reverse primer:GATTGACAGACTCAACAAACACGG
PCR product size:163 (bp), Homo sapiens

   Homo sapiens
Name: RH66503
Also known as: stSG35973
Polymorphism info:  

Cross References Help
Gene GeneID:51097
 Symbol:SCCPDH
 Description:saccharopine dehydrogenase (putative)
 Position:1q44
UniGeneHs.498397 Saccharopine dehydrogenase (putative)

Mapping InformationHelp
RH66503 Sequence Map: Chr 1|HuRef Map Viewer
  Position: 217319131-217319293 (bp)
 
RH66503 Sequence Map: Chr 1|Celera Map Viewer
  Position: 220222787-220222949 (bp)
 
RH66503 Sequence Map: Chr 1 Map Viewer
  Position: 246930542-246930704 (bp)
 
stSG35973 NCBI RH Map: Chr 1 Map Viewer
  Position: 2001.5 (cR)
  Lod score: 1.72
 
stSG35973 GeneMap99-GB4 Map: Chr 1 Map Viewer
  Position: 764.67 (cR3000)
  Lod score: 3.00
  Reference Interval: D1S423-qTEL

Electronic PCR results Help
RefSeq mRNA (1)
NM_016002.2 1577 .. 1739 (163 bp)  
 
mRNA (3)
AF151807.1 1227 .. 1389 (163 bp)  
AK075178.1 1333 .. 1495 (163 bp)  
BC026185.2 1238 .. 1400 (163 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_927572.1 3579901 .. 3580063 (163 bp)  
AC_000044.1 220222787 .. 220222949 (163 bp)  
NW_001838554.1 125788 .. 125950 (163 bp)  
AC_000133.1 217319131 .. 217319293 (163 bp)  
NT_167186.1 40448321 .. 40448483 (163 bp)  
 
Genomic (1)
AL591848.13 101262 .. 101424 (163 bp)  
 
Low-pass Sequence Sampling (from GenBank HTGS division) (1)
AC087266.1 25849 .. 26011 (163 bp)  
 
ESTs (5 of 155)[Show All Hits]
T99925.1 98 .. 260 (163 bp)  
R02421.1 98 .. 260 (163 bp)  
R28482.1 67 .. 231 (165 bp)  
R74259.1 172 .. 334 (163 bp)  
H00584.1 45 .. 207 (163 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01014544.1 449 .. 611 (163 bp)  
AADB02001337.1 74438 .. 74600 (163 bp)  
ABBA01031768.1 42386 .. 42548 (163 bp)  
ABSL01057774.1 42397 .. 42559 (163 bp)  
 
Patent sequences (5 of 19)[Show All Hits]
AX050429.1 1258 .. 1420 (163 bp)  
AX082299.1 1337 .. 1499 (163 bp)  
BD126006.1 55 .. 218 (164 bp)  
BD127555.1 1333 .. 1495 (163 bp)  
AX779918.1 1598 .. 1760 (163 bp)  
 
High Thoughput cDNA sequences (5 of 8)[Show All Hits]
CR595124.1 1239 .. 1401 (163 bp)  
CR601818.1 1242 .. 1404 (163 bp)  
CR602614.1 1239 .. 1401 (163 bp)  
CR612370.1 1258 .. 1420 (163 bp)  
CR618077.1 1214 .. 1376 (163 bp)  
 

   Pan troglodytes
Name: RH66503
Polymorphism info:  

Cross References Help
Gene GeneID:469737
 Symbol:SCCPDH
 Description:saccharopine dehydrogenase (putative)
 Position: 

Mapping InformationHelp
RH66503 Sequence Map: Chr 1 Map Viewer
  Position: 227867470-227867632 (bp)

Electronic PCR results Help
RefSeq mRNA (5)
XM_001140056.1 1609 .. 1771 (163 bp)  
XM_525121.2 1606 .. 1768 (163 bp)  
XM_001139892.1 1608 .. 1770 (163 bp)  
XM_001139978.1 1552 .. 1714 (163 bp)  
XM_001139637.1 1281 .. 1443 (163 bp)  
 
Genomic RefSeqs (1)
NW_001229636.1 3803005 .. 3803167 (163 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01139565.1 28974 .. 29136 (163 bp)  
AACZ02014937.1 2784 .. 2946 (163 bp)  
 

 

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