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UniSTS:59181 Links
D12S2008
Homo sapiens chromosome 12, locus C12orf44
Macaca mulatta chromosome 11, locus C11H12orf44
Pan troglodytes chromosome 12, locus LOC451914

Found by e-PCR in sequences from Homo sapiens, Macaca fascicularis, Macaca mulatta, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:GTTCTCAACTTTATTCCCCATCC
Reverse primer:GGTTTTGTGGTTGCCAGC
PCR product size:150-151 (bp), Homo sapiens
GenBank Accession:G06241 Z38585

   Homo sapiens
Name: D12S2008
Also known as: G00-678-843 GDB:678843 HSC0GH042 WI-6605
Polymorphism info:  

Cross References Help
Gene GeneID:60673
 Symbol:C12orf44
 Description:chromosome 12 open reading frame 44
 Position:12q13.13
UniGeneHs.9911 Chromosome 12 open reading frame 44

Mapping InformationHelp
D12S2008 Sequence Map: Chr 12|HuRef Map Viewer
  Position: 49504280-49504431 (bp)
 
D12S2008 Sequence Map: Chr 12|Celera Map Viewer
  Position: 51273787-51273938 (bp)
 
D12S2008 Sequence Map: Chr 12 Map Viewer
  Position: 52471113-52471264 (bp)
 
WI-6605 NCBI RH Map: Chr 12 Map Viewer
  Position: 442.2 (cR)
  Lod score: 1.36
 
WI-6605 Whitehead-RH Map: Chr 12 Map Viewer
  Position: 316.1 (cR3000)
  Lod score: P0.58
 
WI-6605 GeneMap99-GB4 Map: Chr 12 Map Viewer
  Position: 227.97 (cR3000)
  Lod score: 1.71
  Reference Interval: D12S333-D12S325

Electronic PCR results Help
RefSeq mRNA (2)
NM_021934.4 1271 .. 1422 (152 bp)  
NM_001098673.1 1100 .. 1251 (152 bp)  
 
mRNA (4)
AK021835.1 1269 .. 1420 (152 bp)  
AF218031.1 1211 .. 1362 (152 bp)  
BC005151.2 1223 .. 1374 (152 bp)  
BC009937.2 1205 .. 1356 (152 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_925351.1 14819693 .. 14819844 (152 bp)  
AC_000055.1 51273787 .. 51273938 (152 bp)  
NW_001838057.1 11936551 .. 11936702 (152 bp)  
AC_000144.1 49504280 .. 49504431 (152 bp)  
NT_029419.12 14614419 .. 14614570 (152 bp)  
 
Genomic (2)
G06241.1 4 .. 154 (151 bp)  
AC025259.49 6241 .. 6392 (152 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (2)
AC019244.3 137766 .. 137917 (152 bp)  
AC080174.2 20953 .. 21104 (152 bp)  
 
ESTs (5 of 70)[Show All Hits]
Z38585.1 4 .. 154 (151 bp)  
T55569.1 24 .. 175 (152 bp)  
N92368.1 5 .. 156 (152 bp)  
AA565586.1 4 .. 154 (151 bp)  
AA579904.1 4 .. 155 (152 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01124073.1 4718 .. 4869 (152 bp)  
AADC01105985.1 109425 .. 109576 (152 bp)  
AADB02014966.1 45673 .. 45824 (152 bp)  
ABBA01031626.1 8317 .. 8468 (152 bp)  
ABSL01057691.1 8319 .. 8470 (152 bp)  
 
Patent sequences (5 of 8)[Show All Hits]
BD151515.1 4 .. 155 (152 bp)  
BD159175.1 1269 .. 1420 (152 bp)  
BD251806.1 1259 .. 1410 (152 bp)  
AX871453.1 4 .. 155 (152 bp)  
AX881639.1 1269 .. 1420 (152 bp)  
 

   Macaca fascicularis
 
Polymorphism info:  

Electronic PCR results Help
ESTs (1)
DK582959.1 770 .. 921 (152 bp)  
 

   Macaca mulatta
Name: D12S2008
Polymorphism info:  

Cross References Help
Gene GeneID:696954
 Symbol:C11H12orf44
 Description:chromosome 12 open reading frame 44 ortholog
 Position: 
UniGeneMmu.12460 Similar to CG7053-PA

Mapping InformationHelp
D12S2008 Sequence Map: Chr 11 Map Viewer
  Position: 49208739-49208890 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_001091483.1 1033 .. 1184 (152 bp)  
XM_001091592.1 1384 .. 1535 (152 bp)  
XM_001091708.1 1276 .. 1427 (152 bp)  
 
Genomic RefSeqs (1)
NW_001096621.1 1278352 .. 1278503 (152 bp)  
 
ESTs (1)
CO725851.1 468 .. 618 (151 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01281360.1 16525 .. 16676 (152 bp)  
 

   Pan troglodytes
Name: D12S2008
Polymorphism info:  

Cross References Help
Gene GeneID:451914
 Symbol:LOC451914
 Description:similar to Chromosome 12 open reading frame 44
 Position: 

Mapping InformationHelp
D12S2008 Sequence Map: Chr 12 Map Viewer
  Position: 37558491-37558642 (bp)

Electronic PCR results Help
RefSeq mRNA (5)
XM_001144385.1 1227 .. 1378 (152 bp)  
XM_509074.2 1031 .. 1182 (152 bp)  
XM_001144538.1 1071 .. 1222 (152 bp)  
XM_001144617.1 1380 .. 1531 (152 bp)  
XM_001144690.1 1274 .. 1425 (152 bp)  
 
Genomic RefSeqs (1)
NW_001223157.1 2117520 .. 2117671 (152 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01247469.1 1813 .. 1964 (152 bp)  
AACZ02133760.1 8632 .. 8783 (152 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01169048.1 16378 .. 16529 (152 bp)  
 

 

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