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UniSTS:5657 Links
WI-12390
Homo sapiens chromosome 5, locus C5orf33
Macaca mulatta locus C6H5orf33

Found by e-PCR in sequences from Homo sapiens, Macaca mulatta and Pongo abelii.

Primer InformationHelp

Forward primer:AATCAATAGTCATAACATCATCGTG
Reverse primer:AAAATTTTCAAGACAGAGAATTTTG
PCR product size:125 (bp), Homo sapiens
GenBank Accession:G13292 R60949

   Homo sapiens
Name: WI-12390
Also known as: EST237704
Polymorphism info:  

Cross References Help
Gene GeneID:133686
 Symbol:C5orf33
 Description:chromosome 5 open reading frame 33
 Position:5p13.2
UniGeneHs.81907 Chromosome 5 open reading frame 33

Mapping InformationHelp
WI-12390 Sequence Map: Chr 5|Celera Map Viewer
  Position: 36080359-36080483 (bp)
 
WI-12390 Sequence Map: Chr 5|HuRef Map Viewer
  Position: 36145672-36145796 (bp)
 
WI-12390 Sequence Map: Chr 5 Map Viewer
  Position: 36194680-36194804 (bp)
 
WI-12390 NCBI RH Map: Chr 5 Map Viewer
  Position: 175.4 (cR)
  Lod score: 1.04
 
WI-12390 Whitehead-RH Map: Chr 5 Map Viewer
  Position: 126.9 (cR3000)
  Lod score: P0.71

Electronic PCR results Help
RefSeq mRNA (2)
NM_001085411.1 1771 .. 1895 (125 bp)  
NM_153013.3 1532 .. 1656 (125 bp)  
 
mRNA (4)
AK055158.1 1504 .. 1628 (125 bp)  
AK057950.1 886 .. 1010 (125 bp)  
BX648388.1 1500 .. 1624 (125 bp)  
BC062567.1 1518 .. 1642 (125 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_922596.1 1790873 .. 1790997 (125 bp)  
AC_000048.1 36080359 .. 36080483 (125 bp)  
NW_001838933.1 488283 .. 488407 (125 bp)  
AC_000137.1 36145672 .. 36145796 (125 bp)  
NT_006576.16 36184680 .. 36184804 (125 bp)  
 
Genomic (3)
G13292.1 46 .. 170 (125 bp)  
AC008807.10 94344 .. 94468 (125 bp)  
AC008942.6 36810 .. 36934 (125 bp)  
 
ESTs (5 of 16)[Show All Hits]
R60949.1 46 .. 170 (125 bp)  
AA688425.1 42 .. 166 (125 bp)  
AI816919.1 351 .. 475 (125 bp)  
AI962601.1 377 .. 501 (125 bp)  
AW975470.1 32 .. 156 (125 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01057316.1 15043 .. 15167 (125 bp)  
AADC01050217.1 4756 .. 4880 (125 bp)  
AADB02008662.1 337353 .. 337477 (125 bp)  
ABBA01024164.1 16095 .. 16219 (125 bp)  
ABSL01051895.1 16096 .. 16220 (125 bp)  
 
Patent sequences (2)
AX713573.1 1504 .. 1628 (125 bp)  
BD285796.1 1504 .. 1628 (125 bp)  
 
High Thoughput cDNA sequences (1)
BC045565.1 1659 .. 1783 (125 bp)  
 

   Macaca mulatta
 
Polymorphism info:  

Cross References Help
Gene GeneID:704285
 Symbol:C6H5orf33
 Description:chromosome 5 open reading frame 33 ortholog
 Position: 
UniGeneMmu.13388 Similar to Y17G7B.10b


Electronic PCR results Help
RefSeq mRNA (1)
XM_001092624.1 1838 .. 1964 (127 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01135482.1 2040 .. 2166 (127 bp)  
 

 

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