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UniSTS:56331 Links
A008J23
Homo sapiens chromosome 6, loci FAM46A and LOC100134123
Pan troglodytes chromosome 6, locus LOC462847

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:GTACTTCGCCATGTCTGA
Reverse primer:AGTTCAGCACATTGCAGT
PCR product size:183 (bp), Homo sapiens

   Homo sapiens
Name: A008J23
Also known as:
Polymorphism info:  

Cross References Help
Gene GeneID:100134123
 Symbol:LOC100134123
 Description:hypothetical protein LOC100134123
 Position: 
Gene GeneID:55603
 Symbol:FAM46A
 Description:family with sequence similarity 46, member A
 Position:6q14
UniGeneHs.10784 Family with sequence similarity 46, member A
 Hs.702324 Transcribed locus, strongly similar to XP_001719410.1 PREDICTED: hypothetica...

Mapping InformationHelp
A008J23 Sequence Map: Chr 6|HuRef Map Viewer
  Position: 79679143-79679342 (bp)
 
A008J23 Sequence Map: Chr 6 Map Viewer
  Position: 82461657-82461841 (bp)
 
A008J23 Sequence Map: Chr 6|Celera Map Viewer
  Position: 82884553-82884737 (bp)
 
A008J23 GeneMap99-GB4 Map: Chr 6 Map Viewer
  Position: 367.68 (cR3000)
  Lod score: 3.00
  Reference Interval: D6S445-D6S1644

Electronic PCR results Help
RefSeq mRNA (2)
NM_017633.2 336 .. 520 (185 bp)  
XM_001719358.2 355 .. 523 (169 bp)  
 
mRNA (5 of 9)[Show All Hits]
AK000044.1 304 .. 503 (200 bp)  
AK056057.1 388 .. 587 (200 bp)  
AJ420592.1 156 .. 355 (200 bp)  
AF350451.1 312 .. 481 (170 bp)  
BC007351.2 320 .. 519 (200 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_923184.1 14953157 .. 14953341 (185 bp)  
AC_000049.1 82884553 .. 82884737 (185 bp)  
NW_001838987.1 11857345 .. 11857544 (200 bp)  
AC_000138.1 79679143 .. 79679342 (200 bp)  
NT_007299.13 20581491 .. 20581675 (185 bp)  
 
Genomic (1)
AL078599.19 57730 .. 57914 (185 bp)  
 
ESTs (5 of 83)[Show All Hits]
R26131.1 38 .. 219 (182 bp)  
R67855.1 49 .. 232 (184 bp)  
R68610.1 9 .. 192 (184 bp)  
R69088.1 63 .. 230 (168 bp)  
H13281.1 28 .. 210 (183 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01071681.1 3735 .. 3934 (200 bp)  
AADC01061472.1 86583 .. 86772 (190 bp)  
AADB02010112.1 508188 .. 508372 (185 bp)  
ABBA01040441.1 216315 .. 216514 (200 bp)  
ABSL01063606.1 216315 .. 216514 (200 bp)  
 
Patent sequences (5 of 7)[Show All Hits]
AX511481.1 304 .. 503 (200 bp)  
BD224086.1 282 .. 451 (170 bp)  
AX809430.1 18 .. 217 (200 bp)  
CS038310.1 304 .. 503 (200 bp)  
DD131104.1 304 .. 503 (200 bp)  
 

   Pan troglodytes
Name: A008J23
Polymorphism info:  

Cross References Help
Gene GeneID:462847
 Symbol:LOC462847
 Description:similar to chromosome 6 open reading frame 37
 Position: 

Mapping InformationHelp
A008J23 Sequence Map: Chr 6 Map Viewer
  Position: 82852790-82853004 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_518605.2 261 .. 475 (215 bp)  
XM_001147967.1 293 .. 507 (215 bp)  
XM_001148042.1 568 .. 782 (215 bp)  
 
Genomic RefSeqs (1)
NW_001236562.1 14313107 .. 14313321 (215 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01233672.1 6177 .. 6376 (200 bp)  
AACZ02073288.1 33978 .. 34192 (215 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01075888.1 13325 .. 13527 (203 bp)  
 

 

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