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UniSTS:56229 Links
SHGC-60641
Homo sapiens chromosome 16, loci KIAA0174 and PKD1L3
Pan troglodytes chromosome 16, locus LOC745404

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GTACAGGTATACTACACAGAAGC
Reverse primer:ACTCTTATGTCATAACTTCTGTT
PCR product size:117 (bp), Homo sapiens
GenBank Accession:G26475 T33794

   Homo sapiens
Name: SHGC-60641
Also known as: A002K14 TIGR-A002K14
Polymorphism info:  

Cross References Help
Gene GeneID:342372
 Symbol:PKD1L3
 Description:polycystic kidney disease 1-like 3
 Position:16q22.2
Gene GeneID:9798
 Symbol:KIAA0174
 Description:KIAA0174
 Position:16q22.2
UniGeneHs.232194 KIAA0174
 Hs.651115 Transcribed locus, strongly similar to NP_001017454.1 hypothetical protein L...

Mapping InformationHelp
SHGC-60641 Sequence Map: Chr 16|Celera Map Viewer
  Position: 56276619-56276735 (bp)
 
SHGC-60641 Sequence Map: Chr 16|HuRef Map Viewer
  Position: 57729885-57730001 (bp)
 
SHGC-60641 Sequence Map: Chr 16 Map Viewer
  Position: 71962703-71962819 (bp)
 
TIGR-A002K14 NCBI RH Map: Chr 16 Map Viewer
  Position: 508.6 (cR)
  Lod score: 1.54
 
TIGR-A002K14 Whitehead-RH Map: Chr 16 Map Viewer
  Position: 312.9 (cR3000)
  Lod score: P1.22
 
A002K14 GeneMap99-GB4 Map: Chr 16 Map Viewer
  Position: 434.60 (cR3000)
  Lod score: 0.25
  Reference Interval: D16S3139-D16S512

Electronic PCR results Help
RefSeq mRNA (1)
NM_014761.2 2146 .. 2262 (117 bp)  
 
mRNA (5 of 8)[Show All Hits]
D79996.1 2145 .. 2261 (117 bp)  
AL355695.1 1198 .. 1314 (117 bp)  
BC000116.1 2047 .. 2163 (117 bp)  
BC004359.1 2146 .. 2262 (117 bp)  
AK057902.1 2163 .. 2279 (117 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NT_010498.15 25576902 .. 25577018 (117 bp)  
NW_926517.1 768757 .. 768873 (117 bp)  
AC_000059.1 56276619 .. 56276735 (117 bp)  
NW_001838325.1 543179 .. 543295 (117 bp)  
AC_000148.1 57729885 .. 57730001 (117 bp)  
 
Genomic (3)
G06036.1 88 .. 204 (117 bp)  
G26475.1 1 .. 117 (117 bp)  
AC009127.10 83468 .. 83584 (117 bp)  
 
ESTs (5 of 201)[Show All Hits]
T06627.1 85 .. 201 (117 bp)  
T17335.1 90 .. 206 (117 bp)  
Z38301.1 88 .. 204 (117 bp)  
T32093.1 88 .. 204 (117 bp)  
T33794.1 90 .. 206 (117 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01149895.1 1144 .. 1260 (117 bp)  
AADC01126848.1 15856 .. 15972 (117 bp)  
AADB02017649.1 944207 .. 944323 (117 bp)  
ABBA01016792.1 9950 .. 10066 (117 bp)  
ABSL01045468.1 9950 .. 10066 (117 bp)  
 
Patent sequences (5 of 20)[Show All Hits]
BD186186.1 2121 .. 2237 (117 bp)  
BD186187.1 1351 .. 1467 (117 bp)  
BD186188.1 2179 .. 2295 (117 bp)  
BD190288.1 2145 .. 2261 (117 bp)  
BD190290.1 1351 .. 1467 (117 bp)  
 
High Thoughput cDNA sequences (4)
CR592890.1 1452 .. 1568 (117 bp)  
CR608887.1 1641 .. 1757 (117 bp)  
CR623090.1 1857 .. 1973 (117 bp)  
BC006261.1 2958 .. 3074 (117 bp)  
 

   Pan troglodytes
Name: SHGC-60641
Polymorphism info:  

Cross References Help
Gene GeneID:745404
 Symbol:LOC745404
 Description:similar to KIAA0174
 Position: 

Mapping InformationHelp
SHGC-60641 Sequence Map: Chr 16 Map Viewer
  Position: 71797723-71797839 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_001151193.1 2493 .. 2609 (117 bp)  
 
Genomic RefSeqs (1)
NW_001226058.1 1771079 .. 1771195 (117 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01285054.1 2150 .. 2266 (117 bp)  
AACZ02164143.1 2657 .. 2773 (117 bp)  
 

 

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