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UniSTS:52060 Links
WI-20523
Homo sapiens chromosome 17, locus PTRH2
Pan troglodytes chromosome 17, locus LOC455170

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:GGAGGGGTTGTTGTCATATCA
Reverse primer:TCCAGCCCTACAAGCAGATT
PCR product size:300 (bp), Homo sapiens
GenBank Accession:T65064

   Homo sapiens
Name: WI-20523
Also known as: HSA.13700 STS-T65064
Polymorphism info:  

Cross References Help
Gene GeneID:51651
 Symbol:PTRH2
 Description:peptidyl-tRNA hydrolase 2
 Position:17q23.1
UniGeneHs.12677 Peptidyl-tRNA hydrolase 2

Mapping InformationHelp
WI-20523 Sequence Map: Chr 17|HuRef Map Viewer
  Position: 53147434-53147731 (bp)
 
WI-20523 Sequence Map: Chr 17|Celera Map Viewer
  Position: 54238522-54238819 (bp)
 
WI-20523 Sequence Map: Chr 17 Map Viewer
  Position: 57774771-57775068 (bp)
 
WI-20523 Whitehead-RH Map: Chr 17 Map Viewer
  Position: 436.7 (cR3000)
  Lod score: P1.62
 
WI-20523 GeneMap99-GB4 Map: Chr 17 Map Viewer
  Position: 375.82 (cR3000)
  Lod score: 1.51
  Reference Interval: D17S791-D17S794

Electronic PCR results Help
RefSeq mRNA (1)
NM_016077.3 397 .. 694 (298 bp)  
 
mRNA (5 of 6)[Show All Hits]
AF151905.1 399 .. 696 (298 bp)  
AL137322.1 265 .. 562 (298 bp)  
BC006807.1 310 .. 607 (298 bp)  
AK057033.1 1648 .. 1945 (298 bp)  
AK098219.1 1786 .. 2083 (298 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_926894.1 12169544 .. 12169841 (298 bp)  
AC_000060.1 54238522 .. 54238819 (298 bp)  
NW_001838449.1 123215 .. 123512 (298 bp)  
AC_000149.1 53147434 .. 53147731 (298 bp)  
NT_010783.15 23048923 .. 23049220 (298 bp)  
 
Genomic (2)
AC091271.8 18780 .. 19077 (298 bp)  
AC040904.4 55002 .. 55299 (298 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC074102.2 55314 .. 55611 (298 bp)  
 
ESTs (5 of 56)[Show All Hits]
T64979.1 105 .. 393 (289 bp)  
T65064.1 111 .. 410 (300 bp)  
N94348.1 110 .. 408 (299 bp)  
W69273.1 103 .. 402 (300 bp)  
AA122059.1 103 .. 400 (298 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01155238.1 59882 .. 60179 (298 bp)  
AADC01131271.1 4294 .. 4591 (298 bp)  
AADB02018594.1 59870 .. 60167 (298 bp)  
ABBA01003171.1 56939 .. 57236 (298 bp)  
ABSL01067426.1 56939 .. 57236 (298 bp)  
 
Patent sequences (5 of 7)[Show All Hits]
BD063620.1 332 .. 629 (298 bp)  
AX714588.1 1648 .. 1945 (298 bp)  
CQ725311.1 397 .. 694 (298 bp)  
CQ981331.1 399 .. 696 (298 bp)  
BD286811.1 1648 .. 1945 (298 bp)  
 
High Thoughput cDNA sequences (1)
BC017457.1 1631 .. 1928 (298 bp)  
 

   Pan troglodytes
Name: WI-20523
Polymorphism info:  

Cross References Help
Gene GeneID:455170
 Symbol:LOC455170
 Description:hypothetical LOC455170
 Position: 

Mapping InformationHelp
WI-20523 Sequence Map: Chr 17 Map Viewer
  Position: 58900321-58900618 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XR_022917.1 3723 .. 4020 (298 bp)  
 
Genomic RefSeqs (1)
NW_001226991.1 432972 .. 433269 (298 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01066859.1 1698 .. 1995 (298 bp)  
AACZ02172134.1 53409 .. 53706 (298 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01152269.1 19534 .. 19831 (298 bp)  
 

 

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