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UniSTS:51660 Links D6S1181E Homo sapiens chromosome 6, locus VTA1 Macaca mulatta chromosome 4, locus VTA1 Pan troglodytes chromosome 6, locus VTA1 Found by e-PCR in sequences from Cavia porcellus, Homo sapiens, Macaca fascicularis, Macaca mulatta, Mus musculus, Pan troglodytes, Papio anubis, Pongo abelii and Zea mays. Primer Information Forward primer: GGACATTTTTAGGGTCTTG Reverse primer: TGAAGCATTCATCAGCAG PCR product size: 104 (bp), Homo sapiens    Cavia porcellus   Polymorphism info:   Electronic PCR results Whole Genome Shotgun sequences (1) AAKN02028244.1 935 .. 1647 (713 bp)        Homo sapiens Name: D6S1181E Also known as: GDB:443424 stSG6403 Polymorphism info:   Cross References Gene GeneID: 51534   Symbol: VTA1   Description: Vps20-associated 1 homolog (S. cerevisiae)   Position: 6q24.1 UniGene Hs.431367 Vps20-associated 1 homolog (S. cerevisiae)   Hs.595041 Transcribed locus Mapping Information D6S1181E Sequence Map: Chr 6|HuRef Map Viewer   Position: 140105941-140106044 (bp)   D6S1181E Sequence Map: Chr 6 Map Viewer   Position: 142539926-142540029 (bp)   D6S1181E Sequence Map: Chr 6|Celera Map Viewer   Position: 143280405-143280508 (bp)   stSG6403 GeneMap99-GB4 Map: Chr 6 Map Viewer   Position: 569.96 (cR3000)   Lod score: 3.00   Reference Interval: D6S453-D6S311 Electronic PCR results RefSeq mRNA (1) NM_016485.3 1085 .. 1188 (104 bp)     mRNA (5 of 9)[Show All Hits] AK000051.1 1085 .. 1188 (104 bp)   AF271994.1 1085 .. 1188 (104 bp)   AY007093.1 900 .. 1003 (104 bp)   AF060225.1 1086 .. 1189 (104 bp)   BC006989.1 1095 .. 1198 (104 bp)     Genomic RefSeqs (5 of 6)[Show All Hits] NW_923184.1 75349009 .. 75349112 (104 bp)   AC_000049.1 143280405 .. 143280508 (104 bp)   AC_000138.1 140105941 .. 140106044 (104 bp)   NW_001838990.2 15016854 .. 15016957 (104 bp)   NT_025741.15 46709383 .. 46709486 (104 bp)     Genomic (2) G30318.1 194 .. 297 (104 bp)   AL033522.1 109603 .. 109706 (104 bp)     Working Draft phase 1 (from GenBank HTGS division) (2) AL355489.6 103888 .. 103991 (104 bp)   AC090439.8 26255 .. 26358 (104 bp)     ESTs (5 of 68)[Show All Hits] Z41629.1 180 .. 283 (104 bp)   R38412.1 194 .. 297 (104 bp)   H10209.1 193 .. 297 (105 bp)   D12083.1 151 .. 254 (104 bp)   AA897677.1 183 .. 286 (104 bp)     Whole Genome Shotgun sequences (5 of 6)[Show All Hits] AADD01075698.1 1207 .. 1310 (104 bp)   AADC01064570.1 110334 .. 110437 (104 bp)   AADB02190282.1 570 .. 673 (104 bp)   AADB02010193.1 1930934 .. 1931037 (104 bp)   ABBA01025757.1 586172 .. 586275 (104 bp)     High Thoughput cDNA sequences (4) AF151062.1 1093 .. 1196 (104 bp)   AL136684.1 1089 .. 1192 (104 bp)   BC013217.1 589 .. 692 (104 bp)   CR606694.1 1153 .. 1256 (104 bp)        Macaca fascicularis   Polymorphism info:   Cross References UniGene Mfa.5730 Brain cDNA, clone:QnpA-12170 Electronic PCR results mRNA (1) AB052187.1 2213 .. 2316 (104 bp)        Macaca mulatta Name: D6S1181E Polymorphism info:   Cross References Gene GeneID: 701578   Symbol: VTA1   Description: Vps20-associated 1 homolog (S. cerevisiae)   Position:   UniGene Mmu.11950 Similar to 1110059P08Rik protein Mapping Information D6S1181E Sequence Map: Chr 4 Map Viewer   Position: 121485128-121485231 (bp) Electronic PCR results RefSeq mRNA (1) XM_001092926.1 1275 .. 1378 (104 bp)     Genomic RefSeqs (1) NW_001116522.1 3504020 .. 3504123 (104 bp)     Whole Genome Shotgun sequences (1) AANU01207431.1 480 .. 583 (104 bp)        Mus musculus   Polymorphism info:   Electronic PCR results Genomic RefSeqs (2) NW_001030584.1 50161298 .. 50162121 (824 bp)   NT_039624.7 50957079 .. 50957902 (824 bp)     Genomic (1) AC125028.8 230050 .. 230873 (824 bp)     Whole Genome Shotgun sequences (1) AAHY01127972.1 16265 .. 17088 (824 bp)        Pan troglodytes Name: D6S1181E Polymorphism info:   Cross References Gene GeneID: 463033   Symbol: VTA1   Description: Vps20-associated 1 homolog (S. cerevisiae)   Position:   Mapping Information D6S1181E Sequence Map: Chr 6 Map Viewer   Position: 144694967-144695070 (bp) Electronic PCR results RefSeq mRNA (3) XM_518771.2 1276 .. 1379 (104 bp)   XM_001172031.1 1279 .. 1382 (104 bp)   XM_001172055.1 1195 .. 1298 (104 bp)     Genomic RefSeqs (1) NW_001236564.1 36902586 .. 36902689 (104 bp)     Whole Genome Shotgun sequences (2) AADA01069970.1 4953 .. 5056 (104 bp)   AACZ02076274.1 4872 .. 4975 (104 bp)        Papio anubis   Polymorphism info:   Electronic PCR results ESTs (5 of 9)[Show All Hits] FC117764.1 148 .. 251 (104 bp)   FC123344.1 657 .. 760 (104 bp)   FC127358.1 657 .. 760 (104 bp)   FC137251.1 662 .. 765 (104 bp)   FC148632.1 589 .. 692 (104 bp)        Pongo abelii   Polymorphism info:   Electronic PCR results RefSeq mRNA (1) NM_001133194.1 1120 .. 1223 (104 bp)     ESTs (1) CR764199.1 675 .. 778 (104 bp)     Whole Genome Shotgun sequences (1) ABGA01221140.1 5763 .. 5866 (104 bp)     High Thoughput cDNA sequences (1) CR860737.1 1120 .. 1223 (104 bp)        Zea mays   Polymorphism info:   Electronic PCR results Working Draft phase 1 (from GenBank HTGS division) (1) AC209410.3 110702 .. 111049 (348 bp)

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