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UniSTS:49051 Links
RH71445
Homo sapiens chromosome 17, loci KIAA0195 and CASKIN2
Macaca mulatta chromosome 16, loci CASKIN2 and LOC702374
Pan troglodytes chromosome 17, locus KIAA0195

Found by e-PCR in sequences from Homo sapiens, Macaca mulatta, Macaca nemestrina, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:GCCTGAACCTGAAGATGGAG
Reverse primer:GAAACTTCTCCCAGAACTGGG
PCR product size:140 (bp), Homo sapiens

   Homo sapiens
Name: RH71445
Also known as: stSG39964
Polymorphism info:  

Cross References Help
Gene GeneID:57513
 Symbol:CASKIN2
 Description:CASK interacting protein 2
 Position:17q25.1
Gene GeneID:9772
 Symbol:KIAA0195
 Description:KIAA0195
 Position:17q25.1
UniGeneHs.514474 KIAA0195
 Hs.680550 CDNA FLJ25164 fis, clone CBR08311

Mapping InformationHelp
RH71445 Sequence Map: Chr 17|HuRef Map Viewer
  Position: 68919501-68919640 (bp)
 
RH71445 Sequence Map: Chr 17|Celera Map Viewer
  Position: 70089815-70089954 (bp)
 
RH71445 Sequence Map: Chr 17 Map Viewer
  Position: 73495944-73496083 (bp)
 
stSG39964 NCBI RH Map: Chr 17 Map Viewer
  Position: 764 (cR)
  Lod score: 2.43
 
stSG39964 GeneMap99-GB4 Map: Chr 17 Map Viewer
  Position: 479.72 (cR3000)
  Lod score: 3.00
  Reference Interval: D17S1352-D17S785

Electronic PCR results Help
RefSeq mRNA (1)
NM_014738.4 4875 .. 5014 (140 bp)  
 
mRNA (5 of 6)[Show All Hits]
D83779.1 4803 .. 4942 (140 bp)  
AF070545.1 1230 .. 1369 (140 bp)  
AK057893.1 1776 .. 1915 (140 bp)  
AK094864.1 2377 .. 2516 (140 bp)  
BC045540.1 4763 .. 4902 (140 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_926918.1 10595216 .. 10595355 (140 bp)  
AC_000060.1 70089815 .. 70089954 (140 bp)  
AC_000149.1 68919501 .. 68919640 (140 bp)  
NW_001838454.2 1987582 .. 1987721 (140 bp)  
NT_010783.15 38770096 .. 38770235 (140 bp)  
 
Genomic (2)
AC100787.17 151222 .. 151361 (140 bp)  
BV179130.1 85 .. 224 (140 bp)  
 
ESTs (5 of 103)[Show All Hits]
T91007.1 89 .. 228 (140 bp)  
R42985.1 93 .. 230 (138 bp)  
R70028.1 94 .. 233 (140 bp)  
R72443.1 85 .. 224 (140 bp)  
R85263.1 63 .. 201 (139 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01156376.1 20138 .. 20277 (140 bp)  
AADB02018818.1 15090 .. 15229 (140 bp)  
ABBA01028788.1 15356 .. 15495 (140 bp)  
ABSL01056245.1 15353 .. 15492 (140 bp)  
 
Patent sequences (5 of 15)[Show All Hits]
AX335031.1 4803 .. 4942 (140 bp)  
AX833261.1 2377 .. 2516 (140 bp)  
CQ851274.1 3634 .. 3773 (140 bp)  
CS167140.1 2377 .. 2516 (140 bp)  
DD018167.1 4953 .. 5092 (140 bp)  
 
High Thoughput cDNA sequences (3)
BC018851.1 142 .. 281 (140 bp)  
BC042942.1 5210 .. 5349 (140 bp)  
CR936809.1 5404 .. 5543 (140 bp)  
 

   Macaca mulatta
Name: RH71445
Polymorphism info:  

Cross References Help
Gene GeneID:702374
 Symbol:LOC702374
 Description:similar to Protein KIAA0195 (Transmembrane protein 94)
 Position: 
Gene GeneID:702477
 Symbol:CASKIN2
 Description:CASK interacting protein 2
 Position: 
UniGeneMmu.11134 Similar to Protein KIAA0195 (Transmembrane protein 94)

Mapping InformationHelp
RH71445 Sequence Map: Chr 16 Map Viewer
  Position: 70805675-70805813 (bp)

Electronic PCR results Help
RefSeq mRNA (5 of 10)[Show All Hits]
XM_001096655.1 5003 .. 5141 (139 bp)  
XM_001096873.1 4988 .. 5126 (139 bp)  
XM_001095555.1 4815 .. 4953 (139 bp)  
XM_001095867.1 3141 .. 3279 (139 bp)  
XM_001096196.1 5202 .. 5340 (139 bp)  
 
Genomic RefSeqs (1)
NW_001102983.1 1160047 .. 1160185 (139 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01179914.1 15958 .. 16096 (139 bp)  
 

   Macaca nemestrina
 
Polymorphism info:  

Electronic PCR results Help
ESTs (4)
DY754078.1 429 .. 567 (139 bp)  
EB517891.1 567 .. 705 (139 bp)  
EB517892.1 425 .. 563 (139 bp)  
EB527098.1 43 .. 181 (139 bp)  
 

   Pan troglodytes
Name: RH71445
Polymorphism info:  

Cross References Help
Gene GeneID:454882
 Symbol:KIAA0195
 Description:KIAA0195
 Position: 

Mapping InformationHelp
RH71445 Sequence Map: Chr 17 Map Viewer
  Position: 75094046-75094183 (bp)

Electronic PCR results Help
RefSeq mRNA (2)
XM_511677.2 4712 .. 4849 (138 bp)  
XM_001142508.1 4819 .. 4956 (138 bp)  
 
Genomic RefSeqs (1)
NW_001227008.1 809335 .. 809472 (138 bp)  
 
Whole Genome Shotgun sequences (1)
AACZ02173376.1 206 .. 343 (138 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01216429.1 4758 .. 4897 (140 bp)  
 

 

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