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UniSTS:42974 Links
WI-14003
Homo sapiens chromosome 15, locus AQR
Pan troglodytes chromosome 15, locus AQR

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:GACACACTCAGTGATCAAAACATG
Reverse primer:ATATTTGTTAACTGATTTCGGTGTC
PCR product size:130 (bp), Homo sapiens
GenBank Accession:G21673 H01222

   Homo sapiens
Name: WI-14003
Also known as: EST261102
Polymorphism info:  

Cross References Help
Gene GeneID:9716
 Symbol:AQR
 Description:aquarius homolog (mouse)
 Position:15q14
UniGeneHs.510958 Aquarius homolog (mouse)
 Hs.608739 Transcribed locus, moderately similar to NP_055506.1 aquarius [Homo sapiens]

Mapping InformationHelp
WI-14003 Sequence Map: Chr 15|Celera Map Viewer
  Position: 11908101-11908230 (bp)
 
WI-14003 Sequence Map: Chr 15|HuRef Map Viewer
  Position: 11994367-11994496 (bp)
 
WI-14003 Sequence Map: Chr 15 Map Viewer
  Position: 35148746-35148875 (bp)
 
WI-14003 NCBI RH Map: Chr 15 Map Viewer
  Position: 68.3 (cR)
  Lod score: 3.77
 
WI-14003 Whitehead-RH Map: Chr 15 Map Viewer
  Position: 52.4 (cR3000)
  Lod score: P1.45
 
WI-14003 GeneMap99-GB4 Map: Chr 15 Map Viewer
  Position: 86.52 (cR3000)
  Lod score: 2.49
  Reference Interval: D15S144-D15S118

Electronic PCR results Help
RefSeq mRNA (1)
NM_014691.2 4757 .. 4886 (130 bp)  
 
mRNA (5 of 7)[Show All Hits]
AK001173.1 512 .. 641 (130 bp)  
BX647820.1 5401 .. 5530 (130 bp)  
BX648611.1 3462 .. 3591 (130 bp)  
AB011132.3 4685 .. 4814 (130 bp)  
BC108262.1 1513 .. 1642 (130 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_925840.1 2190870 .. 2190999 (130 bp)  
AC_000058.1 11908101 .. 11908230 (130 bp)  
AC_000147.1 11994367 .. 11994496 (130 bp)  
NW_001838214.2 8724516 .. 8724645 (130 bp)  
NT_010194.17 5939303 .. 5939432 (130 bp)  
 
Genomic (2)
G21673.1 8 .. 137 (130 bp)  
AC018868.4 42935 .. 43064 (130 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (3)
AC069140.2 9673 .. 9802 (130 bp)  
AC090783.2 4976 .. 5105 (130 bp)  
AC091056.4 42884 .. 43013 (130 bp)  
 
ESTs (5 of 40)[Show All Hits]
R66466.1 55 .. 184 (130 bp)  
H01222.1 8 .. 137 (130 bp)  
W04499.1 52 .. 181 (130 bp)  
AA746598.1 111 .. 240 (130 bp)  
AI092231.1 35 .. 164 (130 bp)  
 
Whole Genome Shotgun sequences (5 of 7)[Show All Hits]
AADD01142190.1 1000 .. 1129 (130 bp)  
AADC01119744.1 221813 .. 221942 (130 bp)  
AADB02016381.1 279733 .. 279862 (130 bp)  
ABBA01250925.1 87 .. 216 (130 bp)  
ABBA01038517.1 726 .. 855 (130 bp)  
 
Patent sequences (5 of 6)[Show All Hits]
BD147218.1 512 .. 641 (130 bp)  
BD155980.1 512 .. 641 (130 bp)  
AX867156.1 512 .. 641 (130 bp)  
AX876153.1 512 .. 641 (130 bp)  
DD129440.1 4831 .. 4960 (130 bp)  
 
High Thoughput cDNA sequences (3)
BC027452.1 654 .. 783 (130 bp)  
BC048315.1 910 .. 1039 (130 bp)  
EF553519.1 4718 .. 4847 (130 bp)  
 

   Pan troglodytes
Name: WI-14003
Polymorphism info:  

Cross References Help
Gene GeneID:453308
 Symbol:AQR
 Description:aquarius homolog (mouse)
 Position: 

Mapping InformationHelp
WI-14003 Sequence Map: Chr 15 Map Viewer
  Position: 31714594-31714723 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_510286.2 4945 .. 5074 (130 bp)  
 
Genomic RefSeqs (1)
NW_001225228.1 310168 .. 310297 (130 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01112666.1 1100 .. 1229 (130 bp)  
AACZ02153949.1 1369 .. 1498 (130 bp)  
 

 

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