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UniSTS:38576 Links
RH12753
Homo sapiens chromosome 11, locus TCP11L1
Macaca mulatta chromosome 14, locus LOC694899
Pan troglodytes chromosome 11, locus TCP11L1

Found by e-PCR in sequences from Homo sapiens, Macaca fascicularis, Macaca mulatta, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:CTGCTGCTGTAGGGTGCATA
Reverse primer:GTTGCTATTAAATTTGCTCGCC
PCR product size:120 (bp), Homo sapiens

   Homo sapiens
Name: RH12753
Also known as: stSG4616
Polymorphism info:  

Cross References Help
Gene GeneID:55346
 Symbol:TCP11L1
 Description:t-complex 11 (mouse)-like 1
 Position:11p13
UniGeneHs.655341 T-complex 11 (mouse)-like 1

Mapping InformationHelp
RH12753 Sequence Map: Chr 11|HuRef Map Viewer
  Position: 32788800-32788919 (bp)
 
RH12753 Sequence Map: Chr 11 Map Viewer
  Position: 33094127-33094246 (bp)
 
RH12753 Sequence Map: Chr 11|Celera Map Viewer
  Position: 33240827-33240946 (bp)
 
stSG4616 NCBI RH Map: Chr 11 Map Viewer
  Position: 235.4 (cR)
  Lod score: 1.71
 
stSG4616 GeneMap99-GB4 Map: Chr 11 Map Viewer
  Position: 125.99 (cR3000)
  Lod score: 1.09
  Reference Interval: D11S914-D11S907

Electronic PCR results Help
RefSeq mRNA (2)
NM_001145541.1 1651 .. 1770 (120 bp)  
NM_018393.3 1835 .. 1954 (120 bp)  
 
mRNA (3)
AK002198.1 1633 .. 1752 (120 bp)  
AK090646.1 1818 .. 1937 (120 bp)  
BC041696.1 1654 .. 1773 (120 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_925006.1 28741151 .. 28741270 (120 bp)  
AC_000054.1 33240827 .. 33240946 (120 bp)  
AC_000143.1 32788800 .. 32788919 (120 bp)  
NW_001838022.2 17827123 .. 17827242 (120 bp)  
NT_009237.18 33034127 .. 33034246 (120 bp)  
 
Genomic (2)
AL121926.24 70273 .. 70392 (120 bp)  
AC131263.6 135263 .. 135382 (120 bp)  
 
Low-pass Sequence Sampling (from GenBank HTGS division) (2)
AC087716.1 26103 .. 26222 (120 bp)  
AC087716.1 32575 .. 32694 (120 bp)  
 
ESTs (5 of 9)[Show All Hits]
T27081.1 145 .. 264 (120 bp)  
R51067.1 155 .. 274 (120 bp)  
R41697.1 155 .. 278 (124 bp)  
W81641.1 195 .. 314 (120 bp)  
AA569320.1 201 .. 320 (120 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01114363.1 783 .. 902 (120 bp)  
AADC01097258.1 526496 .. 526615 (120 bp)  
AADB02013801.1 575650 .. 575769 (120 bp)  
ABBA01060898.1 146380 .. 146499 (120 bp)  
ABSL01074064.1 146381 .. 146500 (120 bp)  
 
Patent sequences (4)
BD155073.1 149 .. 268 (120 bp)  
BD157170.1 1633 .. 1752 (120 bp)  
AX875011.1 149 .. 268 (120 bp)  
AX878356.1 1633 .. 1752 (120 bp)  
 
High Thoughput cDNA sequences (1)
BC030582.1 3131 .. 3250 (120 bp)  
 

   Macaca fascicularis
 
Polymorphism info:  

Cross References Help
UniGeneMfa.12534 Brain cDNA clone: QflA-16145, similar to human hypothetical protein FLJ11336...


Electronic PCR results Help
mRNA (1)
AB171974.1 1667 .. 1786 (120 bp)  
 

   Macaca mulatta
Name: RH12753
Polymorphism info:  

Cross References Help
Gene GeneID:694899
 Symbol:LOC694899
 Description:similar to CG16721-PA
 Position: 

Mapping InformationHelp
RH12753 Sequence Map: Chr 14 Map Viewer
  Position: 38745942-38746061 (bp)

Electronic PCR results Help
Genomic RefSeqs (1)
NW_001100377.1 748874 .. 748993 (120 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01216634.1 8011 .. 8130 (120 bp)  
 

   Pan troglodytes
Name: RH12753
Polymorphism info:  

Cross References Help
Gene GeneID:466483
 Symbol:TCP11L1
 Description:t-complex 11 (mouse)-like 1
 Position: 

Mapping InformationHelp
RH12753 Sequence Map: Chr 11 Map Viewer
  Position: 33308301-33308420 (bp)

Electronic PCR results Help
Genomic RefSeqs (1)
NW_001222276.1 2875969 .. 2876088 (120 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01359733.1 50613 .. 50732 (120 bp)  
AACZ02123700.1 135042 .. 135161 (120 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01362631.1 6205 .. 6324 (120 bp)  
 

 

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