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UniSTS:18962 Links
RH17820
Homo sapiens chromosome 11, locus TCP11L1
Macaca mulatta locus LOC694899
Pan troglodytes chromosome 11, locus TCP11L1

Found by e-PCR in sequences from Homo sapiens, Macaca fascicularis, Macaca mulatta, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:ATCTTACTCAGGATTGCATCG
Reverse primer:TCATCAGAAGCCATTGCC
PCR product size:144 (bp), Homo sapiens
GenBank Accession:R51067

   Homo sapiens
Name: RH17820
Also known as: R51067
Polymorphism info:  

Cross References Help
Gene GeneID:55346
 Symbol:TCP11L1
 Description:t-complex 11 (mouse)-like 1
 Position:11p13
UniGeneHs.655341 T-complex 11 (mouse)-like 1

Mapping InformationHelp
RH17820 Sequence Map: Chr 11|HuRef Map Viewer
  Position: 32788736-32788879 (bp)
 
RH17820 Sequence Map: Chr 11 Map Viewer
  Position: 33094063-33094206 (bp)
 
RH17820 Sequence Map: Chr 11|Celera Map Viewer
  Position: 33240763-33240906 (bp)
 
R51067 NCBI RH Map: Chr 11 Map Viewer
  Position: 235.4 (cR)
  Lod score: 1.72
 
R51067 GeneMap99-GB4 Map: Chr 11 Map Viewer
  Position: 125.99 (cR3000)
  Lod score: 1.09
  Reference Interval: D11S914-D11S907

Electronic PCR results Help
RefSeq mRNA (2)
NM_001145541.1 1587 .. 1730 (144 bp)  
NM_018393.3 1771 .. 1914 (144 bp)  
 
mRNA (3)
AK002198.1 1569 .. 1712 (144 bp)  
AK090646.1 1754 .. 1897 (144 bp)  
BC041696.1 1590 .. 1733 (144 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_925006.1 28741087 .. 28741230 (144 bp)  
AC_000054.1 33240763 .. 33240906 (144 bp)  
AC_000143.1 32788736 .. 32788879 (144 bp)  
NW_001838022.2 17827163 .. 17827306 (144 bp)  
NT_009237.18 33034063 .. 33034206 (144 bp)  
 
Genomic (3)
AL121926.24 70313 .. 70456 (144 bp)  
AC131263.6 135303 .. 135446 (144 bp)  
AY413322.1 1371 .. 1514 (144 bp)  
 
Low-pass Sequence Sampling (from GenBank HTGS division) (2)
AC087716.1 26039 .. 26182 (144 bp)  
AC087716.1 32511 .. 32654 (144 bp)  
 
ESTs (5 of 10)[Show All Hits]
T27081.1 185 .. 328 (144 bp)  
R51067.1 195 .. 338 (144 bp)  
R41697.1 196 .. 346 (151 bp)  
W81641.1 131 .. 274 (144 bp)  
AA569320.1 137 .. 280 (144 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01114363.1 719 .. 862 (144 bp)  
AADC01097258.1 526432 .. 526575 (144 bp)  
AADB02013801.1 575690 .. 575833 (144 bp)  
ABBA01060898.1 146420 .. 146563 (144 bp)  
ABSL01074064.1 146421 .. 146564 (144 bp)  
 
Patent sequences (5)
BD155073.1 189 .. 332 (144 bp)  
BD157170.1 1569 .. 1712 (144 bp)  
AX875011.1 189 .. 332 (144 bp)  
AX878356.1 1569 .. 1712 (144 bp)  
CQ722860.1 1371 .. 1514 (144 bp)  
 
High Thoughput cDNA sequences (1)
BC030582.1 3067 .. 3210 (144 bp)  
 

   Macaca fascicularis
 
Polymorphism info:  

Cross References Help
UniGeneMfa.12534 Brain cDNA clone: QflA-16145, similar to human hypothetical protein FLJ11336...


Electronic PCR results Help
mRNA (1)
AB171974.1 1603 .. 1747 (145 bp)  
 

   Macaca mulatta
 
Polymorphism info:  

Cross References Help
Gene GeneID:694899
 Symbol:LOC694899
 Description:similar to CG16721-PA
 Position: 


Electronic PCR results Help
RefSeq mRNA (1)
XM_001083552.1 1476 .. 1620 (145 bp)  
 

   Pan troglodytes
Name: RH17820
Polymorphism info:  

Cross References Help
Gene GeneID:466483
 Symbol:TCP11L1
 Description:t-complex 11 (mouse)-like 1
 Position: 

Mapping InformationHelp
RH17820 Sequence Map: Chr 11 Map Viewer
  Position: 33308237-33308380 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_521882.2 1371 .. 1514 (144 bp)  
 
Genomic RefSeqs (1)
NW_001222276.1 2875905 .. 2876048 (144 bp)  
 
Genomic (1)
AY413323.1 1371 .. 1514 (144 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01359733.1 50653 .. 50796 (144 bp)  
AACZ02123700.1 135082 .. 135225 (144 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01362631.1 6141 .. 6284 (144 bp)  
 

 

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