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UniSTS:16293 Links
RH69726
Homo sapiens chromosome 1, locus SCCPDH
Pan troglodytes chromosome 1, locus SCCPDH

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:AGTCTTTTGCCTTATTTTAGGGCTT
Reverse primer:TTTGGACCTGCCGATG
PCR product size:245 (bp), Homo sapiens
GenBank Accession:R00275

   Homo sapiens
Name: RH69726
Also known as: R00275
Polymorphism info:  

Cross References Help
Gene GeneID:51097
 Symbol:SCCPDH
 Description:saccharopine dehydrogenase (putative)
 Position:1q44
UniGeneHs.498397 Saccharopine dehydrogenase (putative)
 Hs.601016 Transcribed locus

Mapping InformationHelp
RH69726 Sequence Map: Chr 1|HuRef Map Viewer
  Position: 217319738-217319982 (bp)
 
RH69726 Sequence Map: Chr 1|Celera Map Viewer
  Position: 220223394-220223638 (bp)
 
RH69726 Sequence Map: Chr 1 Map Viewer
  Position: 246931149-246931393 (bp)
 
R00275 GeneMap99-GB4 Map: Chr 1 Map Viewer
  Position: 764.67 (cR3000)
  Lod score: 3.00
  Reference Interval: D1S423-qTEL

Electronic PCR results Help
RefSeq mRNA (1)
NM_016002.2 2184 .. 2428 (245 bp)  
 
mRNA (1)
AF151807.1 1832 .. 2076 (245 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_927572.1 3580508 .. 3580752 (245 bp)  
AC_000044.1 220223394 .. 220223638 (245 bp)  
NW_001838554.1 126395 .. 126639 (245 bp)  
AC_000133.1 217319738 .. 217319982 (245 bp)  
NT_167186.1 40448928 .. 40449172 (245 bp)  
 
Genomic (1)
AL591848.13 101869 .. 102113 (245 bp)  
 
ESTs (5 of 17)[Show All Hits]
R00275.1 56 .. 300 (245 bp)  
AA677609.1 45 .. 289 (245 bp)  
AA677714.1 45 .. 290 (246 bp)  
AI094495.1 43 .. 287 (245 bp)  
AI126501.1 44 .. 288 (245 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01014544.1 1056 .. 1300 (245 bp)  
AADB02001337.1 75045 .. 75289 (245 bp)  
ABBA01031768.1 42993 .. 43237 (245 bp)  
ABSL01057774.1 43004 .. 43248 (245 bp)  
 
Patent sequences (5 of 8)[Show All Hits]
AX082299.1 1944 .. 2188 (245 bp)  
BD458653.1 1876 .. 2120 (245 bp)  
BD446576.1 1832 .. 2076 (245 bp)  
DD131006.1 1832 .. 2076 (245 bp)  
DD416257.1 1832 .. 2076 (245 bp)  
 

   Pan troglodytes
Name: RH69726
Polymorphism info:  

Cross References Help
Gene GeneID:469737
 Symbol:SCCPDH
 Description:saccharopine dehydrogenase (putative)
 Position: 

Mapping InformationHelp
RH69726 Sequence Map: Chr 1 Map Viewer
  Position: 227868064-227868308 (bp)

Electronic PCR results Help
RefSeq mRNA (5)
XM_001140056.1 2203 .. 2447 (245 bp)  
XM_525121.2 2200 .. 2444 (245 bp)  
XM_001139892.1 2202 .. 2446 (245 bp)  
XM_001139978.1 2146 .. 2390 (245 bp)  
XM_001139637.1 1875 .. 2119 (245 bp)  
 
Genomic RefSeqs (1)
NW_001229636.1 3803599 .. 3803843 (245 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01139565.1 29568 .. 29812 (245 bp)  
AACZ02014937.1 2108 .. 2352 (245 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01391766.1 9009 .. 9250 (242 bp)  
 

 

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