ncbi logo
UniSTS logo
 PubMed  Entrez  BLAST  OMIM  Taxonomy  Structure
  Search for

Entrez UniSTS
Help
Query tips
Submit
Submit map
FTP site
Statistics

Related sites
e-PCR
Map Viewer
Gene
UniGene
dbSNP
GeneMap'99
MGD
ZFIN

Genomic biology
Bos taurus
Canis familiaris
Danio rerio
Homo sapiens
Mus musculus
Rattus novegicus
Sus scrofa

UniSTS:15416 Links
RH46837
Homo sapiens chromosome 6, loci FAM46A and LOC100134123
Pan troglodytes chromosome 6, locus LOC462847

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:AGGGTACTTCGCCATGTCTG
Reverse primer:ATAGTCCAAGCAATGCCCAC
PCR product size:151 (bp), Homo sapiens

   Homo sapiens
Name: RH46837
Also known as: stSG24948
Polymorphism info:  

Cross References Help
Gene GeneID:100134123
 Symbol:LOC100134123
 Description:hypothetical protein LOC100134123
 Position: 
Gene GeneID:55603
 Symbol:FAM46A
 Description:family with sequence similarity 46, member A
 Position:6q14
UniGeneHs.10784 Family with sequence similarity 46, member A
 Hs.702324 Transcribed locus, strongly similar to XP_001719410.1 PREDICTED: hypothetica...

Mapping InformationHelp
RH46837 Sequence Map: Chr 6|HuRef Map Viewer
  Position: 79679180-79679345 (bp)
 
RH46837 Sequence Map: Chr 6 Map Viewer
  Position: 82461694-82461844 (bp)
 
RH46837 Sequence Map: Chr 6|Celera Map Viewer
  Position: 82884590-82884740 (bp)
 
stSG24948 GeneMap99-GB4 Map: Chr 6 Map Viewer
  Position: 368.28 (cR3000)
  Lod score: 3.00
  Reference Interval: D6S445-D6S1644

Electronic PCR results Help
RefSeq mRNA (2)
NM_017633.2 333 .. 483 (151 bp)  
XM_001719358.2 392 .. 526 (135 bp)  
 
mRNA (5 of 9)[Show All Hits]
AK000044.1 301 .. 466 (166 bp)  
AK056057.1 385 .. 550 (166 bp)  
AJ420592.1 153 .. 318 (166 bp)  
AF350451.1 309 .. 444 (136 bp)  
BC007351.2 317 .. 482 (166 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_923184.1 14953194 .. 14953344 (151 bp)  
AC_000049.1 82884590 .. 82884740 (151 bp)  
NW_001838987.1 11857382 .. 11857547 (166 bp)  
AC_000138.1 79679180 .. 79679345 (166 bp)  
NT_007299.13 20581528 .. 20581678 (151 bp)  
 
Genomic (1)
AL078599.19 57767 .. 57917 (151 bp)  
 
ESTs (5 of 83)[Show All Hits]
R26131.1 35 .. 183 (149 bp)  
R67855.1 46 .. 196 (151 bp)  
R68610.1 6 .. 156 (151 bp)  
R69088.1 60 .. 194 (135 bp)  
H13281.1 25 .. 174 (150 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01071681.1 3772 .. 3937 (166 bp)  
AADC01061472.1 86620 .. 86775 (156 bp)  
AADB02010112.1 508185 .. 508335 (151 bp)  
ABBA01040441.1 216352 .. 216517 (166 bp)  
ABSL01063606.1 216352 .. 216517 (166 bp)  
 
Patent sequences (5 of 7)[Show All Hits]
AX511481.1 301 .. 466 (166 bp)  
BD224086.1 279 .. 414 (136 bp)  
AX809430.1 15 .. 180 (166 bp)  
CS038310.1 301 .. 466 (166 bp)  
DD131104.1 301 .. 466 (166 bp)  
 

   Pan troglodytes
Name: RH46837
Polymorphism info:  

Cross References Help
Gene GeneID:462847
 Symbol:LOC462847
 Description:similar to chromosome 6 open reading frame 37
 Position: 

Mapping InformationHelp
RH46837 Sequence Map: Chr 6 Map Viewer
  Position: 82852827-82853007 (bp)

Electronic PCR results Help
RefSeq mRNA (3)
XM_518605.2 258 .. 438 (181 bp)  
XM_001147967.1 290 .. 470 (181 bp)  
XM_001148042.1 565 .. 745 (181 bp)  
 
Genomic RefSeqs (1)
NW_001236562.1 14313144 .. 14313324 (181 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01233672.1 6214 .. 6379 (166 bp)  
AACZ02073288.1 34015 .. 34195 (181 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01075888.1 13362 .. 13530 (169 bp)  
 

 

Questions or Comments?
Write to the NCBI Service Desk

Disclaimer   Privacy statement