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Genomic biology
Bos taurus
Canis familiaris
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Homo sapiens
Mus musculus
Rattus novegicus
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UniSTS:12399 Links
A002M12
Bos taurus chromosome 28, locus MGC159954
Canis familiaris chromosome 4, loci NDST2 and LOC479251
Equus caballus chromosome 1, loci LOC100064113 and LOC100064078
Homo sapiens chromosome 10, loci NDST2, KIAA0913, and LOC100292807
Macaca mulatta chromosome 9, loci NDST2 and LOC706210
Pan troglodytes chromosome 10, loci LOC738171 and LOC450527

Found by e-PCR in sequences from Bos taurus, Canis lupus, Equus caballus, Felis catus, Homo sapiens, Macaca mulatta, Macaca nemestrina, Mus musculus, Oryctolagus cuniculus, Pan troglodytes, Pongo abelii and Tursiops truncatus.

Primer InformationHelp

Forward primer:AGATCATCCTCACTCAGTT
Reverse primer:GCCAAATAAATACCAGAG
PCR product size:155 (bp), Homo sapiens
GenBank Accession:G26503

   Bos taurus
Name: A002M12
Polymorphism info:  

Cross References Help
Gene GeneID:533041
 Symbol:MGC159954
 Description:hypothetical LOC533041
 Position: 
UniGeneBt.22294 Hypothetical LOC533041

Mapping InformationHelp
A002M12 Sequence Map: Chr 28 Map Viewer
  Position: 29080309-29080463 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
NM_001102149.1 4586 .. 4740 (155 bp)  
 
mRNA (1)
BC151646.1 4586 .. 4740 (155 bp)  
 
Genomic RefSeqs (1)
NW_001501727.2 737836 .. 737990 (155 bp)  
 
Genomic (1)
DAAA02061901.1 78236 .. 78390 (155 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (2)
AC172941.3 42491 .. 42645 (155 bp)  
AC159719.4 198388 .. 198542 (155 bp)  
 
ESTs (5 of 26)[Show All Hits]
AW482995.1 93 .. 247 (155 bp)  
AW654204.1 63 .. 217 (155 bp)  
AW654219.1 63 .. 217 (155 bp)  
AW656179.1 156 .. 310 (155 bp)  
AV592938.1 61 .. 215 (155 bp)  
 
Whole Genome Shotgun sequences (1)
AAFC03092135.1 21582 .. 21736 (155 bp)  
 

   Canis familiaris
Name: A002M12
Polymorphism info:  

Cross References Help
Gene GeneID:479251
 Symbol:LOC479251
 Description:similar to CG32542-PA
 Position: 
Gene GeneID:489049
 Symbol:NDST2
 Description:N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
 Position: 

Mapping InformationHelp
A002M12 Sequence Map: Chr 4 Map Viewer
  Position: 27445362-27445516 (bp)

   Canis lupus
 
Polymorphism info:  

Electronic PCR results Help
RefSeq mRNA (4)
XM_857835.1 1448 .. 1602 (155 bp)  
XM_857862.1 2155 .. 2309 (155 bp)  
XM_536393.2 5516 .. 5670 (155 bp)  
XM_857906.1 3904 .. 4058 (155 bp)  
 
Genomic RefSeqs (1)
NW_876311.1 13952154 .. 13952308 (155 bp)  
 
ESTs (5 of 29)[Show All Hits]
CO587388.1 37 .. 191 (155 bp)  
CO587426.1 11 .. 165 (155 bp)  
CO595399.1 37 .. 191 (155 bp)  
CO596940.1 38 .. 192 (155 bp)  
CO599849.1 37 .. 191 (155 bp)  
 
Whole Genome Shotgun sequences (1)
AAEX02011740.1 153012 .. 153166 (155 bp)  
 

   Equus caballus
Name: A002M12
Polymorphism info:  

Cross References Help
Gene GeneID:100064078
 Symbol:LOC100064078
 Description:hypothetical LOC100064078
 Position: 
Gene GeneID:100064113
 Symbol:LOC100064113
 Description:similar to heparan N-deacetylase/N-sulfotransferase-2
 Position: 

Mapping InformationHelp
A002M12 Sequence Map: Chr 1 Map Viewer
  Position: 61460171-61460325 (bp)

Electronic PCR results Help
RefSeq mRNA (1)
XM_001918143.1 5642 .. 5796 (155 bp)  
 
Genomic RefSeqs (1)
NW_001867386.1 61460171 .. 61460325 (155 bp)  
 
Whole Genome Shotgun sequences (1)
AAWR02008188.1 46087 .. 46241 (155 bp)  
 

   Felis catus
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (2)
AANG01047578.1 1638 .. 1792 (155 bp)  
ACBE01369168.1 1809 .. 1963 (155 bp)  
 

   Homo sapiens
Name: A002M12
Also known as: TIGR-A002M12
Polymorphism info:  

Cross References Help
Gene GeneID:100292807
 Symbol:LOC100292807
 Description:hypothetical protein LOC100292807
 Position: 
Gene GeneID:23053
 Symbol:KIAA0913
 Description:KIAA0913
 Position:10q22.2
Gene GeneID:8509
 Symbol:NDST2
 Description:N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
 Position:10q22
UniGeneHs.65135 KIAA0913

Mapping InformationHelp
A002M12 Sequence Map: Chr 10|Celera Map Viewer
  Position: 68844537-68844691 (bp)
 
A002M12 Sequence Map: Chr 10|HuRef Map Viewer
  Position: 69556440-69556594 (bp)
 
A002M12 Sequence Map: Chr 10 Map Viewer
  Position: 75561364-75561518 (bp)
 
TIGR-A002M12 NCBI RH Map: Chr 10 Map Viewer
  Position: 940.4 (cR)
  Lod score: 1.25
 
TIGR-A002M12 Whitehead-RH Map: Chr 10 Map Viewer
  Position: 458.2 (cR3000)
  Lod score: P0.00
 
A002M12 GeneMap99-GB4 Map: Chr 10 Map Viewer
  Position: 380.97 (cR3000)
  Lod score: 0.03
  Reference Interval: D10S188-D10S195

Electronic PCR results Help
RefSeq mRNA (1)
NM_015037.2 5648 .. 5802 (155 bp)  
 
mRNA (5 of 8)[Show All Hits]
AL133662.1 4298 .. 4452 (155 bp)  
AK023742.1 3425 .. 3579 (155 bp)  
BC036835.1 848 .. 1002 (155 bp)  
BC040726.1 1138 .. 1292 (155 bp)  
BC063694.1 781 .. 935 (155 bp)  
 
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_924796.1 23038780 .. 23038934 (155 bp)  
AC_000053.1 68844537 .. 68844691 (155 bp)  
AC_000142.1 69556440 .. 69556594 (155 bp)  
NW_001837987.2 5899564 .. 5899718 (155 bp)  
NT_030059.13 26365828 .. 26365982 (155 bp)  
 
Genomic (2)
G26503.1 1 .. 155 (155 bp)  
AC022400.9 134317 .. 134471 (155 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC037447.2 153606 .. 153760 (155 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (1)
AL844520.8 139324 .. 139478 (155 bp)  
 
ESTs (5 of 88)[Show All Hits]
T06179.1 33 .. 187 (155 bp)  
T32268.1 33 .. 187 (155 bp)  
R05796.1 35 .. 189 (155 bp)  
R44022.1 43 .. 197 (155 bp)  
R44643.1 46 .. 200 (155 bp)  
 
Whole Genome Shotgun sequences (5)
AADD01108747.1 14377 .. 14531 (155 bp)  
AADC01092063.1 23282 .. 23436 (155 bp)  
AADB02013165.1 44424 .. 44578 (155 bp)  
ABBA01020308.1 60246 .. 60400 (155 bp)  
ABSL01048421.1 60246 .. 60400 (155 bp)  
 
Patent sequences (5 of 17)[Show All Hits]
AX333410.1 33 .. 187 (155 bp)  
AX408430.1 33 .. 187 (155 bp)  
BD155173.1 33 .. 187 (155 bp)  
BD160171.1 3425 .. 3579 (155 bp)  
AX875111.1 33 .. 187 (155 bp)  
 
High Thoughput cDNA sequences (2)
BC052780.1 4026 .. 4180 (155 bp)  
BC082763.1 47 .. 201 (155 bp)  
 

   Macaca mulatta
Name: A002M12
Polymorphism info:  

Cross References Help
Gene GeneID:706210
 Symbol:LOC706210
 Description:similar to CG32542-PA
 Position: 
Gene GeneID:714578
 Symbol:NDST2
 Description:N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
 Position: 
UniGeneMmu.2664 Similar to CG32542-PA

Mapping InformationHelp
A002M12 Sequence Map: Chr 9 Map Viewer
  Position: 63218471-63218625 (bp)

Electronic PCR results Help
RefSeq mRNA (2)
XM_001099968.1 4465 .. 4619 (155 bp)  
XM_001099765.1 5894 .. 6048 (155 bp)  
 
Genomic RefSeqs (1)
NW_001124211.1 3835481 .. 3835635 (155 bp)  
 
Genomic (1)
AC190302.5 136245 .. 136399 (155 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC190289.3 95434 .. 95588 (155 bp)  
 
Working Draft phase 2 (from GenBank HTGS division) (1)
AC190309.8 75476 .. 75630 (155 bp)  
 
ESTs (2)
CN805361.1 367 .. 521 (155 bp)  
CO580357.1 143 .. 297 (155 bp)  
 
Whole Genome Shotgun sequences (1)
AANU01283095.1 5943 .. 6097 (155 bp)  
 

   Macaca nemestrina
 
Polymorphism info:  

Electronic PCR results Help
ESTs (1)
DY755814.1 7 .. 161 (155 bp)  
 

   Mus musculus
 
Polymorphism info:  

Cross References Help
UniGeneMm.275082 RIKEN cDNA 2310021P13 gene


Electronic PCR results Help
ESTs (1)
AW476210.1 45 .. 199 (155 bp)  
 
High Thoughput cDNA sequences (1)
AK194430.1 126 .. 281 (156 bp)  
 

   Oryctolagus cuniculus
 
Polymorphism info:  

Electronic PCR results Help
ESTs (1)
DN888326.1 36 .. 190 (155 bp)  
 
Whole Genome Shotgun sequences (1)
AAGW02037055.1 28820 .. 28974 (155 bp)  
 

   Pan troglodytes
Name: A002M12
Polymorphism info:  

Cross References Help
Gene GeneID:450527
 Symbol:LOC450527
 Description:hypothetical LOC450527
 Position: 
Gene GeneID:738171
 Symbol:LOC738171
 Description:similar to heparan N-deacetylase/N-sulfotransferase-2
 Position: 

Mapping InformationHelp
A002M12 Sequence Map: Chr 10 Map Viewer
  Position: 72999312-72999466 (bp)

Electronic PCR results Help
RefSeq mRNA (2)
XM_507850.2 5894 .. 6048 (155 bp)  
XM_001146127.1 4473 .. 4627 (155 bp)  
 
Genomic RefSeqs (1)
NW_001220701.1 65158 .. 65312 (155 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01274691.1 1831 .. 1985 (155 bp)  
AACZ02115144.1 1816 .. 1970 (155 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Working Draft phase 1 (from GenBank HTGS division) (1)
AC221012.2 103819 .. 103973 (155 bp)  
 
Whole Genome Shotgun sequences (1)
ABGA01166336.1 42344 .. 42498 (155 bp)  
 

   Tursiops truncatus
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABRN01269019.1 9771 .. 9913 (143 bp)  
 

 

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