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UniSTS:10361 Links
SHGC-32584
Homo sapiens chromosome 6, locus LOC100130357
Pan troglodytes chromosome 6, locus PHACTR1

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Pongo abelii.

Primer InformationHelp

Forward primer:ACTGAGCATATGACATCTTTCCC
Reverse primer:CATTTCTGGGGGAGTCTGG
PCR product size:133 (bp), Homo sapiens
GenBank Accession:G27600 H83427

   Homo sapiens
Name: SHGC-32584
Also known as: EST385727 SGC32584
Polymorphism info:  

Cross References Help
Gene GeneID:100130357
 Symbol:LOC100130357
 Description:similar to hCG2038897
 Position:6p24.1
UniGeneHs.436996 Phosphatase and actin regulator 1

Mapping InformationHelp
SHGC-32584 Sequence Map: Chr 6|HuRef Map Viewer
  Position: 13224911-13225043 (bp)
 
SHGC-32584 Sequence Map: Chr 6 Map Viewer
  Position: 13287915-13288047 (bp)
 
SHGC-32584 Sequence Map: Chr 6|Celera Map Viewer
  Position: 14520888-14521020 (bp)
 
SHGC-32584 NCBI RH Map: Chr 6 Map Viewer
  Position: 119.3 (cR)
  Lod score: 1.73
 
SHGC-32584 TNG Map: Chr 6 Map Viewer
  Position: 8696 (cR50000)
  Lod score: 17.4
  Reference Interval: 21
 
SHGC-32584 Stanford-G3 Map: Chr 6 Map Viewer
  Position: 821 (cR10000)
  Lod score: F
  Reference Interval: 2
 
SGC32584 Whitehead-RH Map: Chr 6 Map Viewer
  Position: 69.6 (cR3000)
  Lod score: P0.01
 
SHGC-32584 GeneMap99-G3 Map: Chr 6 Map Viewer
  Position: 953 (cR10000)
  Lod score: F
  Reference Interval: D6S1640-D6S422
 
SGC32584 GeneMap99-GB4 Map: Chr 6 Map Viewer
  Position: 47.63 (cR3000)
  Lod score: 0.41
  Reference Interval: D6S1640-D6S422

Electronic PCR results Help
Genomic RefSeqs (5 of 6)[Show All Hits]
NW_922984.1 12916144 .. 12916276 (133 bp)  
AC_000049.1 14520888 .. 14521020 (133 bp)  
NW_001838973.1 9569948 .. 9570080 (133 bp)  
AC_000138.1 13224911 .. 13225043 (133 bp)  
NT_007592.15 13227915 .. 13228047 (133 bp)  
 
Genomic (2)
G27600.1 2 .. 134 (133 bp)  
AL008729.1 110563 .. 110695 (133 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC051661.1 91124 .. 91256 (133 bp)  
 
ESTs (5 of 12)[Show All Hits]
H83427.1 2 .. 134 (133 bp)  
H98750.1 23 .. 153 (131 bp)  
H98916.1 23 .. 155 (133 bp)  
AA713488.1 44 .. 175 (132 bp)  
AA809685.1 44 .. 176 (133 bp)  
 
Whole Genome Shotgun sequences (5 of 7)[Show All Hits]
AADD01067227.1 17760 .. 17892 (133 bp)  
AADC01058343.1 177825 .. 177957 (133 bp)  
AADB02347253.1 184 .. 316 (133 bp)  
AADB02186498.1 13 .. 145 (133 bp)  
AADB02009968.1 549749 .. 549881 (133 bp)  
 
Patent sequences (2)
CQ861449.1 110563 .. 110695 (133 bp)  
CQ919775.1 439 .. 571 (133 bp)  
 

   Pan troglodytes
Name: SHGC-32584
Polymorphism info:  

Cross References Help
Gene GeneID:462438
 Symbol:PHACTR1
 Description:phosphatase and actin regulator 1
 Position: 

Mapping InformationHelp
SHGC-32584 Sequence Map: Chr 6 Map Viewer
  Position: 13508647-13508779 (bp)

Electronic PCR results Help
Genomic RefSeqs (1)
NW_001236512.1 9692518 .. 9692650 (133 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01144651.1 2324 .. 2455 (132 bp)  
AACZ02069220.1 34576 .. 34708 (133 bp)  
 

   Pongo abelii
 
Polymorphism info:  

Electronic PCR results Help
Whole Genome Shotgun sequences (1)
ABGA01346201.1 23223 .. 23355 (133 bp)  
 

 

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