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Pr008809956.1 Links

Small interfering RNA (siRNA) probe for Homo sapiens gene ATP-binding cassette, subfamily B, member 1 (ABCB1). Developed for RNA interference (RNAi). Reagent is available from Qiagen.

 

Small interfering RNA (siRNA)

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SEQUENCE

>gnl|Probe|8809956a.1 siRNA probe , sense strand (21 bp)
CGAACACATTGGAAGGAAATT
Position Feature
1 .. 19 sense strand 
20 .. 21 siRNA overhang (dna)


>gnl|Probe|8809956b.1 siRNA probe , antisense strand (21 bp)
TTTCCTTCCAATGTGTTCGGC
Position Feature
1 .. 19 antisense strand for NM_000927
20 .. 21 siRNA overhang (dna)



REFERENCES

Martin SE, et al.  Multiplexing siRNAs to compress RNAi-based screen size in human cells. Nucleic Acids Res. 2007 ;35(8):E57.


DISTRIBUTOR

Qiagen
» Qiagen - Sample and Assay Technologies

SUBMISSION DETAILS

Created On: 24-Oct-2007

Sequence Updated On: 25-Oct-2007

Annotation Updated On: 26-Oct-2007

Probe design is based on Homo sapiens ABCB1 sequence NM_000927.3.

Submitted by Natasha J. Caplen.
Prepared by NCBI staff from published data (Martin SE et al, 2007) .

  • ABCB1
Probes for gene ABCB1 (Primary_Assembly assembly, build 37)
The current probe (Pr008809956.1) is in red.


Probe Name Type %ID Notes1
Pr120332.1 -- siRNA 100 GV
Pr003104239.1 -- siRNA 100 GV
Pr003104240.1 -- siRNA 100 GV
Pr003104537.1 -- siRNA 100 GV
Pr003104538.1 -- siRNA 100 GV
Pr006098689.1 -- siRNA 100 GV
Pr008809955.1 -- siRNA 100 G
Pr008809956.1 -- siRNA 100 G
Pr130052.1 V2HS_131344 shRNA 100 G
Pr133728.1 V2HS_131346 shRNA 100 G
Pr160820.1 V2HS_131345 shRNA 100 G
Pr168298.1 V2HS_131347 shRNA 100 G
Pr195856.1 -- shRNA 100 GV
Pr195857.1 -- shRNA 100 GV
Pr195858.1 -- shRNA 100 GV
Pr195859.1 -- shRNA 100 GV
Pr195860.1 -- shRNA 100 GV
Pr195861.1 -- shRNA 100 GV
Pr195862.1 -- shRNA 100 GV
Pr195863.1 -- shRNA 100 GV
Pr003104438.1 -- shRNA 100 GLV
Pr003104439.1 -- shRNA 100 GV
Pr006103021.1 -- shRNA 100 GV
Pr006103022.1 -- shRNA 100 GV
Pr006478445.1 Hs00184491_m1 TaqMan n/a G
Pr006478446.1 Hs00184500_m1 TaqMan n/a G
Pr006533597.1 Hs01067800_m1 TaqMan n/a G
Pr006533598.1 Hs01067802_m1 TaqMan n/a G
Pr006534395.1 Hs01069047_m1 TaqMan n/a G
Pr006535207.1 Hs01070639_m1 TaqMan n/a G
Pr006535208.1 Hs01070640_g1 TaqMan n/a G
Pr006535209.1 Hs01070641_g1 TaqMan n/a G
Pr006535210.1 Hs01070642_g1 TaqMan n/a G
Pr006535211.1 Hs01070643_gH TaqMan n/a G
Pr006535212.1 Hs01070645_m1 TaqMan n/a G
Pr006535213.1 Hs01070646_g1 TaqMan n/a G
Pr006535214.1 Hs01070647_m1 TaqMan n/a G
Pr006535215.1 Hs01070648_m1 TaqMan n/a G
Pr006535216.1 Hs01070649_m1 TaqMan n/a G
Pr006535217.1 Hs01070650_g1 TaqMan n/a G
Pr006535218.1 Hs01070651_m1 TaqMan n/a G
Pr006535219.1 Hs01070652_m1 TaqMan n/a G
Pr006535220.1 Hs01070654_g1 TaqMan n/a G
Pr006535221.1 Hs01070655_m1 TaqMan n/a G
Pr006535222.1 Hs01070656_m1 TaqMan n/a G
Pr006621750.1 Hs02382131_s1 TaqMan n/a G
Pr008694566.1 -- shRNA 100 GV
Pr008694567.1 -- shRNA 100 GV
Pr008702173.1 TRCN0000059683 shRNA 100 G
Pr008702174.1 TRCN0000059684 shRNA 100 G
Pr008702175.1 TRCN0000059685 shRNA 100 G
Pr008702176.1 TRCN0000059686 shRNA 100 G
Pr008702177.1 TRCN0000059687 shRNA 100 G
1. Notes
  G = Probes designed for this gene (53 probes)
  L = Low-complexity sequences with amplicon (1 probes)
  V = Validated experimentally (28 probes)
  g = Probes designed for other genes/organisms (42 probes)


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