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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones

FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 CTC-228K22 3pter(UChicago)
chr3 0Mb   D3S4559    
3 RP11-106B10 C 3p26(FHCRC)
chr3 4Mb AC015541.21,
  BH897863.1 T7,
BH897864.1 SP6,
AQ323468.1 SP6
3 RP11-116K5 C 3p26(FHCRC)
chr3 5Mb AC018458.13,
  AQ348754.1 SP6,
AQ348756.1 T7
3 RP11-129K1 C 3p26(FHCRC)
chr3 2Mb AC069522.7 AFMA064WH9    
3 RP11-129L14 C 3p26(FHCRC)
chr3 2Mb   AFMB296ZF5    
3 RP11-166F3 C 3p26(FHCRC)
chr3 0Mb AC026171.2   AQ419014.1 SP6,
AQ419017.1 T7
3 RP11-202A21 C 3p26(FHCRC)
chr3 8Mb AC013493.2,
  BH897882.1 T7,
AQ413705.1 SP6,
BH897883.1 SP6
3 RP11-204C23 C 3p26(FHCRC)
chr3 1Mb AC018814.6,
AC024216.16, AC006431.9*u
AFM217XD2, AFM217XD2*u AQ413785.1 T7,
AQ413782.1 SP6
3 RP11-32F23 C 3p26(FHCRC)
chr3 4Mb AC069264.5 AFM217XD6 AQ047334.1  
3 RP11-33J20 C 3p26(FHCRC)
chr3 2Mb   AFMB296ZF5 AQ044995.1  
3 RP11-622A14 C 3p26(FHCRC)
chr3 4Mb AC090955.3   AQ370485.1 SP6,
AQ370400.1 T7
3 RP11-7M24 C 3p26(FHCRC)
chr3 6Mb AC012136.2   B72232.1 T7,
B72231.1 SP6
3 RP11-90K1 3p26(FHCRC)
chr3 3Mb AC078915.7   AQ283462.1 T7,
AQ283459.1 SP6
3 RP11-91K16 C 3p26(FHCRC)
chr3 4Mb     AQ282649.1 T7,
AQ282646.1 SP6
3 RP5-850I3 R 3p26(UCSF)
chr3 2Mb   AFMB296ZF5    
3 RP11-1016H17 C 3p25~26(FHCRC)
chr3 9Mb AC018808.5   AQ595599.1 T7  
3 RP11-128A5 C 3p25~26(FHCRC)
chr3 8Mb AC068312.5 AFMC023XB5    
3 RP11-266J6 C 3p25~26(FHCRC)
chr3 9Mb AC011610.11,
  BH900420.1 T7,
AQ479047.1 T7,
BH897892.1 SP6,
AQ479045.1 SP6
3 RP11-28P14 C 3p25~26(FHCRC)
chr3 6Mb AC067736.7 AFM234TF4, AFM234TF4*u B87467.1 T7,
AQ003475.1 SP6
3 RP11-438J1 C 3p25~26(FHCRC)
chr3 10Mb AC022384.5      
3 RP11-91K4 C 3p25~26(FHCRC)
chr3 9Mb AC048350.10   AQ282613.1 T7,
AQ282611.1 SP6
3 CTD-2192H7 R 3p24~pter(UCSF)
chr3 12Mb     AQ734259.1 T7,
AQ766563.1*u SP6
3 RP11-63O1 R 3p26.3b(NCI)
chr3 2Mb AC022008.4,
  CL423084.1 SP6,
AQ201824.1 ,
CL423089.1 T7
3 RP11-63O1 R 3p26.3b(NCI)
chrY 57Mb AC022008.4*d,
  CL423089.1 T7,
CL423084.1 SP6,
3 RP11-453F3 R 3p26.2b~26.3a(NCI)
chr3 3Mb AC024167.6   CL423120.1 SP6,
CL423125.1 T7
3 RP11-33E18 R 3p26.1c(NCI)
chr3 5Mb AC073515.4   AQ046812.1 ,
CL423156.1 T7,
CL423151.1 SP6
3 RP11-669E3 R 3p26.1b(NCI)
chr3 7Mb AC034194.5   CL423091.1 SP6,
AQ430326.1 SP6,
CL423095.1 T7
3 RP11-21J23 R 3p26.1a(NCI)
chr3 8Mb AC024146.7   B85979.1 T7,
B85978.1 SP6
3 RP11-19E8 R 3p25.3d(NCI)
chr3 8Mb AC034186.5   B81952.1 T7,
B89539.1*u SP6
3 RP11-402P11 R 3p25.3c~25.3d(NCI)
chr3 9Mb AC018829.3   CL423129.1 T7  
3 CTB-15N5 R 3p25(CSMC)
chr3 16Mb   AFM207WE5    
3 CTB-17A6 R 3p25(CSMC)
chr3 11Mb   AFM079YG5    
3 CTB-3P23 R 3p25(CSMC)
chr3 13Mb   AFMA353XA9    
3 CTB-47F22 R 3p25(CSMC)
chr3 19Mb   AFMA083YE5    
3 CTB-9J5 R 3p25(CSMC)
chr3 10Mb   AFMA337XG5, AFMA350XF5    
3 CTD-2246G18 R 3p25(UCSF)
chr3 12Mb     AQ153605.1 SP6,
AQ084259.1 T7
3 RP11-105H19 C 3p25(FHCRC)
chr3 11Mb AC020750.4   AQ323501.1 SP6,
AQ323503.1 T7
3 RP11-121D3 C 3p25(FHCRC)
chr3 14Mb AC016963.10*d AFM205VA9*u AQ350922.1 SP6 multiple_placements_on_genome
3 RP11-121D3 C 3p25(FHCRC)
chr3 2Mb AC016963.10 AFM205VA9*u AQ350922.1*d SP6 multiple_placements_on_genome
3 RP11-126L4 C 3p25(FHCRC)
chr3 12Mb AC026166.5   AQ349641.1 T7  
3 RP11-169K17 C 3p25(FHCRC)
chr3 11Mb AC022001.5   AQ422723.1 SP6  
3 RP11-175G7 C 3p25(FHCRC)
chr3 44Mb   AFM079YG5*d, AFM079YG5*u AZ521164.1 SP6 multiple_placements_on_genome
3 RP11-175G7 C 3p25(FHCRC)
chr3 11Mb   AFM079YG5, AFM079YG5*u AZ521164.1*d SP6 multiple_placements_on_genome
3 RP11-275J11 C 3p25(FHCRC)
chr3 12Mb AC018500.4   AQ503972.1 SP6  
3 RP11-57D6 C 3p25(FHCRC)
chr3 13Mb AC017001.4   AQ194759.1 ,
3 RP4-561A19 R 3p25(UCSF)
chr3 38Mb   AFM038XC1    
3 RP4-575N5 R 3p25(UCSF)
chr3 15Mb   AFM197XG11    
3 RP4-605K1 R 3p25(UCSF)
chr3 8Mb   D3S3591    
3 RP4-673B23 R 3p25(UCSF)
chr3 8Mb   AFMC023XB5    
3 RP5-854A2 R 3p25(UCSF)
chr3 4Mb   AFM217XD6    
3 RP5-862J8 R 3p25(UCSF)
chr3 10Mb   D3S3589    
3 RP11-255O19 C 3p24.3~25(FHCRC)
chr3 15Mb AC090945.1 AFM197XG11, AFM197XG11*u    
3 RP11-271E2 C 3p24.3~25(FHCRC)
chr3 13Mb AC024151.16,
AFM283VB5, AFM283VB5*u    
3 RP11-279L16 C 3p24.3~25(FHCRC)
chr3 15Mb AC069521.12 AFMB046ZB5 AQ508068.1 T7,
AQ508067.1*u SP6
3 RP11-80D24 C 3p24.3~25(FHCRC)
chr3 17Mb AC090959.1   AQ317757.1 T7,
AQ317736.1 SP6
3 RP11-451A20 C 3p24~25(FHCRC)
chr3 17Mb     AQ583054.1 SP6,
AQ583058.1 T7
3 RP4-712J19 R 3p24~25(UCSF)
chr3 32Mb   D3S2432    
3 RP11-115G3 R 3p25.3b(NCI)
chr3 10Mb AC013503.3   AQ343735.1 T7,
AQ343733.1 SP6
3 RP11-625C9 R 3p25.2a~25.2b(NCI)
chr3 11Mb AC026020.2   AQ403702.1 T7,
AQ403783.1 SP6
3 RP11-470I10 R 3p25.1d(NCI)
chr3 13Mb AC018566.4,
  BH900359.1 SP6,
BH900358.1 T7
3 RP11-72K12 R 3p25.1a(NCI)
chr3 15Mb AC026102.14      
3 RP11-125A16 R 3p24.3e(NCI)
chr3 16Mb AC067973.2   AQ347597.1 T7,
AQ347595.1 SP6
3 RP11-17C24 C 3p24.3(FHCRC)
chr3 21Mb AC022049.3   B82630.1 T7,
B82629.1 SP6
3 RP11-208G16 C 3p24.3(FHCRC)
chr3 22Mb AC121253.3 AFM301ZE9 AQ418708.1 T7  
3 RP11-41F5 C 3p24.3(FHCRC)
chr3 23Mb AC020626.6 AFMA346XA9 AQ029210.1 T7,
AZ518154.1 SP6
3 RP11-89F18 C 3p24.3(FHCRC)
chr3 23Mb AC092038.3   AQ285843.1 T7  
3 CTB-48J17 R 3p24(CSMC)
chr3 27Mb   D3S1266    
3 RP11-245E5 C 3p24(FHCRC)
chr3 22Mb AC018542.8 AFMB331YE9 AQ487267.1 SP6,
AQ487269.1 T7
3 RP11-316J16 C 3p24(FHCRC)
chr3 23Mb AC079840.8   BH897900.1 SP6,
BH897899.1 T7
3 RP11-444A4 C 3p24(FHCRC)
chr3 19Mb AC022805.4      
3 RP11-54L6 C 3p24(FHCRC)
chr3 18Mb AC105765.3   AQ082774.1 ,
3 RP11-659P16 C 3p24(FHCRC)
chr3 25Mb AC022906.2,
  AQ438221.1 T7,
AQ518647.1 SP6
3 RP11-708D1 C 3p24(FHCRC)
chr3 14Mb AC090957.1   AQ613604.1 SP6,
AQ432764.1 T7
3 RP11-79E6 C 3p24(FHCRC)
chr3 20Mb AC069533.6   AQ581307.1 SP6,
AQ282584.1 SP6,
AZ519155.1 SP6,
AQ282587.1 T7,
AQ629581.1 T7,
AQ581310.1*u T7
3 RP11-90I9 C 3p24(FHCRC)
chr3 19Mb AC099538.2   AQ281667.1 SP6,
AQ281670.1 T7
3 RP11-91I6 C 3p24(FHCRC)
chr3 23Mb     AQ282468.1 SP6,
AQ282469.1 T7
3 RP4-632A13 R 3p24(UCSF)
chr3 40Mb   D3S3658    
3 RP5-939A11 R 3p24(UCSF)
chr3 41Mb   D3S4063    
3 RP11-103N21 CR 3p23~24(FHCRC)
chr3 29Mb AC099048.2 AFM320WC9, AFM320WC9*u AQ314093.1 T7,
AQ314091.1 SP6
3 RP11-11L6 C 3p23~24(FHCRC)
chr11 74Mb AC093412.3*d AFM183YC3*d, AFM183YC3*u BH897866.1 SP6,
BH897865.1 T7,
B74911.1*d SP6,
B74912.1*d T7
3 RP11-11L6 C 3p23~24(FHCRC)
chr3 28Mb AC093412.3 AFM183YC3, AFM183YC3*u B74911.1 SP6,
B74912.1 T7,
BH897865.1*d T7,
BH897866.1*d SP6
3 RP11-451C4 C 3p23~24(FHCRC)
chr3 25Mb     AQ583075.1 T7,
AQ583066.1 SP6
3 RP11-197J13 R 3p24.3c~24.3d(NCI)
chr3 20Mb AC098972.2      
3 RP11-484G2 R 3p24.3a(NCI)
chr3 22Mb AC024732.4   CL423158.1 SP6,
CL423161.1 T7
3 RP11-421F9 R 3p24.2a(NCI)
chr3 25Mb AC133141.2   BH900343.1 SP6,
BH900342.1 T7
3 RP11-167C9 R 3p24.1a(NCI)
chr3 30Mb AC138391.2   AQ381455.1 T7,
AQ381454.1*u SP6
3 CTB-18E2 R 3p23(CSMC)
chr3 30Mb   AFMA090ZB1    
3 CTB-41C16 R 3p23(CSMC)
chr3 30Mb   AFMA090ZB1    
3 RP11-56P22 R 3p22.3c(NCI)
chr3 34Mb AC093557.4   AQ082576.1 ,
3 CTB-34I13 R 3p22(CSMC)
chr3 44Mb   UTR-04941    
3 CTD-2278F18 C 3p22(FHCRC)
chr3 50Mb   Hs.201675    
3 RP11-209O16 CR 3p22(FHCRC)
chr3 38Mb AC016156.11 AFM038XC1, AFM038XC1*u AQ420322.1 SP6  
3 RP11-235D8 C 3p22(FHCRC)
chr8 37Mb   SHGC-10029 AQ491531.1 SP6  
3 RP11-241P3 C 3p22(FHCRC)
chr3 42Mb AC092048.2 AFMA162WD9 AQ481742.1 SP6,
AQ482364.1 T7
3 RP11-259K5 C 3p22(FHCRC)
chr3 37Mb AC097359.2   AQ485261.1 SP6,
AQ485262.1 T7
3 RP11-286G5 C 3p22(FHCRC)
chr3 36Mb AC092051.2 AFM220XG3, AFM220XG3*u    
3 RP11-331G2 C 3p22(FHCRC)
chr3 39Mb AC092053.3      
3 RP11-345J6 C 3p22(FHCRC)
chr3 32Mb AC094019.2   BH900412.1 T7  
3 RP11-491D6 C 3p22(FHCRC)
chr3 36Mb AC006583.31      
3 RP11-90B15 C 3p22(FHCRC)
chr3 40Mb AC099331.2   AQ283534.1 SP6,
AZ517980.1 T7,
AQ283537.1 T7
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 RP11-90H23 C 3p22(FHCRC)
chr3 38Mb     AQ284327.1 T7,
AZ518503.1 T7,
AQ284325.1 SP6
3 RP11-90M23 C 3p22(FHCRC)
chr3 38Mb AC092417.2   AQ284410.1 T7,
AQ284407.1 SP6
3 RP11-91E4 C 3p22(FHCRC)
chr3 38Mb     AZ518728.1 T7  
3 RP11-91E8 C 3p22(FHCRC)
chr3 45Mb AC133140.2   AQ284420.1 T7,
AQ284417.1 SP6
3 RP11-944L7 C 3p22(FHCRC)
chr3 44Mb AC099669.2   AQ700450.1 SP6  
3 RP4-690P14 R 3p22(UCSF)
chr3 49Mb   D3S3092    
3 RP5-1059I15 R 3p22(UCSF)
chr3 42Mb   SHGC-13840    
3 RP11-141M3 C 3p21.3~22(FHCRC)
chr3 42Mb AC092043.3   AQ385247.1 SP6,
BH897877.1 SP6,
AQ385249.1 T7
3 RP11-119L2 C 3p21~22(FHCRC)
chr3 42Mb AC048329.8 AFMC006YH1 AQ341776.1 T7,
AQ341775.1 SP6
3 RP11-188P20 C 3p21~22(FHCRC)
chr3 43Mb AC104184.2      
3 RP11-172A18 R 3p22.3a~22.3b(NCI)
chr3 35Mb AC124974.2   AQ413552.1 SP6,
AZ520190.1*u T7
3 RP11-268J19 R 3p22.1c(NCI)
chr3 39Mb AC104185.2   AQ491048.1 T7,
AQ491045.1 SP6
3 RP11-219I21 R 3p22.1b(NCI)
chr3 42Mb AC092047.3      
3 RP11-24L15 R 3p22.1a(NCI)
chr3 43Mb AC022627.4   B86703.1 T7,
B88750.1 SP6
3 RP11-107O13 C 3p21.3(FHCRC)
chr3 45Mb AC099539.2   AQ320914.1 SP6,
AQ320915.1 T7
3 RP11-111P21 C 3p21.3(FHCRC)
chr3 45Mb AC092500.2 AFMA231XE9 AQ341909.1 T7,
AQ341906.1 SP6
3 RP11-189H19 C 3p21.3(FHCRC)
chr3 44Mb AC092046.2 AFMB291ZC9    
3 RP11-793E15 C 3p21.3(FHCRC)
chr3 46Mb AC104439.2   AQ837462.1 SP6,
AQ837353.1 T7
3 CTB-17N4 R 3p21.3~21.2(CSMC)
chr3 54Mb   AFMB347ZG9    
3 RP11-91P19 C 3p21.2~21.3(FHCRC)
chr3 46Mb     AQ284290.1 SP6,
AQ284292.1 T7
3 CTA-2G6 R 3p21(CSMC)
chr3 43Mb   D3S3678    
3 CTB-10N14 R 3p21(CSMC)
chr3 48Mb   AFMA141ZC5    
3 CTB-18A22 R 3p21(CSMC)
chr3 58Mb   AFMA119XC1    
3 CTB-18C21 R 3p21(CSMC)
chr3 58Mb   AFMA119XC1    
3 CTB-20F12 R 3p21(CSMC)
chr3 54Mb   AFMB338ZG9    
3 RP11-148G20 C 3p21(FHCRC)
chr3 48Mb AC121252.4      
3 RP11-221E20 C 3p21(FHCRC)
chr3 129Mb AC023598.30   BZ369518.1 T7,
BZ369519.1 SP6
3 RP11-24F11 C 3p21(FHCRC)
chr3 46Mb AC098613.2   AQ013380.1 ,
B86609.1 T7
3 RP11-330H6 C 3p21(FHCRC)
chr3 52Mb AC097637.2      
3 RP11-3B7 CR 3p21(FHCRC)
chr3 49Mb AC121247.2 AA454143 B63346.1 T7,
B47886.1*u SP6
3 RP11-425J9 CR 3p21(FHCRC)
chr3 46Mb AC094020.2      
3 RP11-493K19 C 3p21(FHCRC)
chr3 49Mb AC104450.2      
3 RP11-502L5 C 3p21(FHCRC)
chr3 48Mb AC104190.3      
3 RP11-78O10 C 3p21(FHCRC)
chr3 49Mb AC099330.1 AA129089 AQ285668.1 SP6  
3 RP11-804H8 CR 3p21(FHCRC)
chr3 50Mb AC096920.2   AQ722686.1 SP6,
AQ525401.1 T7
3 RP11-852E15 C 3p21(FHCRC)
chr3 45Mb AC099782.2      
3 RP11-949J7 C 3p21(FHCRC)
chr3 49Mb AC087503.2,
  AQ609168.1 T7  
3 RP4-553B21 R 3p21(UCSF)
chr3 44Mb   SHGC-15360    
3 RP4-655G2 R 3p21(UCSF)
chr3 44Mb   WI-17754    
3 RP4-736H12 R 3p21(UCSF)
chr3 42Mb AC006060.1 D3S2319    
3 RP5-923O15 R 3p21(UCSF)
chr3 44Mb   SHGC-15360    
3 RP11-447A21 C 3p14~21(FHCRC)
chr3 52Mb AC104446.2      
3 RP11-80H18 C 3p21~14(FHCRC)
chr3 58Mb AC098479.2   AZ521462.1 T7,
AQ284092.1 T7,
AQ284089.1 SP6
3 RP11-82B23 C 3p14~21(FHCRC)
chr3 53Mb AC097015.2      
3 RP11-875H7 C 3p14~21(FHCRC)
chr3 55Mb AC121764.2   AQ819924.1*u SP6  
3 CTD-2219E18 C 3p13(FHCRC)
chr3 72Mb     AQ893335.1 T7  
3 RP11-348P10 R 3p21.32b~21.32c(NCI)
chr3 44Mb AC124045.2   AQ530042.1 SP6,
AQ530044.1 T7
3 RP11-81N21 C 3p21.32(FHCRC)
chr3 44Mb     AZ516069.1 T7,
AZ516067.1 SP6
3 RP11-88B8 CR 3p21.31j~21.31k(NCI)
chr3 47Mb AC016928.20,
  AQ286022.1 T7,
AQ286020.1 SP6
3 RP11-120C2 C 3p21.2(FHCRC)
chr3 57Mb AC121250.2 AFMB059WF1 AQ349825.1 T7,
AQ349823.1 SP6
3 RP11-122D19 C 3p21.2(FHCRC)
chr3 54Mb AC115282.2 AFM287YD9, AFM287YD9*u AQ383795.1 SP6,
BH897868.1 SP6,
AQ343573.1 T7,
BH897867.1 T7
3 RP11-124O2 C 3p21.2(FHCRC)
chr3 54Mb AC018352.23,
AFM198YF2, AFM198YF2*u AQ343375.1 T7,
AQ343374.1 SP6
3 RP11-169G24 C 3p21.2(FHCRC)
chr3 56Mb AC099775.2 AFMA082WH1 AQ413589.1 SP6  
3 RP11-189K9 C 3p21.2(FHCRC)
chr3 54Mb AC068753.13 AFM274YD5, AFM274YD5*u AQ421648.1 SP6  
3 RP11-229A12 C 3p21.2(FHCRC)
chr3 57Mb AC092418.3 AFM191VA5    
3 RP11-39L1 C 3p21.2(FHCRC)
chr3 55Mb   AFMA072YB9 AQ029524.1 T7  
3 RP11-758M15 C 3p21.2(FHCRC)
chr3 52Mb AC044892.6 AA757406, AA460675    
3 RP11-89F17 C 3p21.2(FHCRC)
chr3 51Mb AC092037.2   AQ284681.1 SP6,
AZ517755.1 T7,
AQ284683.1 T7
3 RP11-89K24 C 3p21.2(FHCRC)
chr3 54Mb     AQ283370.1 SP6,
AZ517257.1 SP6,
AQ283373.1*u T7
3 RP11-91M18 C 3p21.2(FHCRC)
chr3 47Mb     AQ282726.1 T7,
AQ282724.1 SP6
3 CTB-1K4 R 3p21.1(CSMC)
chr3 60Mb   AFM220YH4, AFM220YH4*u    
3 CTB-1O12 R 3p21.1(CSMC)
chr3 60Mb   AFM220YH4, AFM220YH4*u    
3 RP11-865O5 R 3p14.3d~21.1a(NCI)
chr3 52Mb AC012522.11   CL423018.1 SP6,
CL423023.1 T7
3 CTA-401B4 R 3p14.3(CSMC)
chr3 125Mb   AFMA137ZF5    
3 RP11-180G14 C 3p14.3(FHCRC)
chr3 59Mb   AFMA072ZH5    
3 RP11-88P20 C 3p14.3(FHCRC)
chr3 62Mb     AZ516928.1 T7,
AQ281653.1 T7,
AQ281650.1 SP6
3 RP11-8J14 C 3p14.3(FHCRC)
chr3 54Mb   AFM198YF2, AFM198YF2*u    
3 CTB-17L15 R 3p14(CSMC)
chr3 59Mb   AFMA072ZH5    
3 RP11-108A8 C 3p14(FHCRC)
chr3 63Mb AC072020.9 AFM308XC9, AFM308XC9*u AQ318249.1 T7,
AQ318245.1 SP6
3 RP11-114P15 C 3p14(FHCRC)
chr3 62Mb AC092039.2 AFMA163YF1 AQ383673.1 T7,
AQ342459.1 SP6
3 RP11-129B22 C 3p14(FHCRC)
chr3 64Mb AC092040.2 AFM198TE7, AFM198TE7*u    
3 RP11-204J18 C 3p14(FHCRC)
chr3 62Mb AC092502.2      
3 RP11-34D21 S 3p14.1~14.3(SC)
chr3 60Mb     AQ046388.1  
3 RP11-79J19 C 3p14(FHCRC)
chr3 58Mb AC087573.1, AC069502.9*u   AQ284314.1 T7,
AQ284312.1 SP6
3 RP11-79K17 C 3p14(FHCRC)
chr3 58Mb AC121249.1   AZ519098.1 SP6,
AQ317608.1 SP6,
AQ281989.1 T7
3 RP11-89B6 C 3p14(FHCRC)
chr3 166Mb AC055712.12, AC055708.19*u   AQ285684.1*d T7,
AQ285683.1*u SP6
3 RP11-89B6 C 3p14(FHCRC)
chr3 60Mb AC055712.13*d, AC055708.19*u   AQ285684.1 T7,
AQ285683.1*u SP6
3 RP11-89O2 C 3p14(FHCRC)
chr3 64Mb AC118548.1 AFM198TE7, AFM198TE7*u AQ283529.1 T7,
AZ517689.1 SP6,
AQ283526.1 SP6
3 RP11-94D19 C 3p14(FHCRC)
chr3 60Mb AC096917.3 AFM211ZG11 AQ315786.1 T7,
AQ282117.1 SP6
3 RP11-146E16 C 3p13~14(FHCRC)
chr3 67Mb AC092044.2 AFMA059XB5 AQ372336.1 T7,
AQ372333.1 SP6
3 RP11-582M4 C 3p13~14(FHCRC)
chr3 69Mb AC092060.2   AQ331678.2 T7,
AQ336605.1*u SP6
3 RP11-90H15 C 3p13~14(FHCRC)
chr3 71Mb AC097632.2   AQ284299.1 SP6,
AZ518485.1 T7,
AQ284302.1 T7
3 CTD-2175D15 C 3p12(UCSF)
chr3 59Mb     AQ899789.1 T7,
AQ086922.1*u SP6
3 RP11-754F19 R 3p14.3c(NCI)
chr3 56Mb AC099559.2      
3 RP11-92A17 R 3p14.2d(NCI)
chr3 58Mb AC068163.1*u   AQ318788.1 SP6,
AQ286165.1 T7
3 CTB-7P8 R 3p14.2(CSMC)
chr3 62Mb   AFMA163YF1    
3 RP11-154H23 C 3p14.1(FHCRC)
chr3 71Mb AC097634.2 AFMA176YG9 AQ385849.1*u T7  
3 RP11-179B9 C 3p14.1(FHCRC)
chr3 64Mb   AFMB306YG5 AQ418281.1 T7,
AQ418279.1 SP6
3 RP11-81N13 C 3p14.1(FHCRC)
chr3 68Mb AC138390.2   AQ281897.1 SP6,
AZ516063.1 T7,
AQ282006.1 T7
3 RP11-88H12 C 3p14.1(FHCRC)
chr3 65Mb AC121493.1   AZ516242.1 T7,
AQ286797.1 T7,
AQ286794.1 SP6,
AZ516230.1 SP6
3 RP11-89A12 C 3p14.1(FHCRC)
chr3 68Mb AC092416.3   AQ286843.1 SP6,
AQ286844.1 T7
3 RP11-89E12 C 3p14.1(FHCRC)
chr22 37Mb     AZ517016.1 T7,
AQ282747.1 T7,
AQ282744.1 SP6
3 RP11-50F24 R 3p14.1c(NCI)
chr3 63Mb AC104162.2   AQ053435.1  
3 RP11-14D22 R 3p14.1b(NCI)
chr3 64Mb AC096888.2   B82266.1 T7,
AZ521703.1 SP6
3 RP11-444P10 R 3p14.1a(NCI)
chr3 69Mb AC104445.2      
3 CTB-12N15 R 3p13(CSMC)
chr3 70Mb   MR12352    
3 CTB-8C4 R 3p13(CSMC)
chr3 70Mb   MR12352    
3 RP11-215K24 C 3p12~13(FHCRC)
chr3 70Mb AC024717.3,
  BH897903.1 SP6,
BH897886.1 T7
3 RP11-79C12 C 3p12~13(FHCRC)
chr3 0Mb AC092036.3   AQ282458.1 T7,
AQ629575.1 T7,
AZ519148.1 SP6,
AQ581277.1 SP6,
AQ282455.1 SP6
3 RP11-79C12 C 3p12~13(FHCRC)
chr3 68Mb AC092036.3*d   AQ581277.1 SP6,
AZ519148.1 SP6,
AQ282455.1 SP6,
AQ282458.1 T7,
AQ629575.1 T7
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 RP11-522N9 R 3p13a(NCI)
chr3 72Mb AC104330.2      
3 RP11-781E19 R 3p12.3d(NCI)
chr3 74Mb AC016930.14   AQ756173.1 T7,
AQ497448.1 SP6
3 RP11-89H10 C 3p12.3(FHCRC)
chr3 76Mb AC021866.17   AQ285891.1 T7,
AQ285889.1*u SP6
3 RP11-26H10 C 3p12(FHCRC)
chr3 80Mb AC016220.4   B86868.1 T7,
B86867.1 SP6
3 RP11-291P10 C 3p12(FHCRC)
chr3 81Mb AC099049.2      
3 RP11-655A17 C 3p12(FHCRC)
chr3 87Mb AC027756.2,
  AQ432317.1*u SP6,
AQ609664.1*u T7
3 RP11-79F5 C 3p12(FHCRC)
chr3 83Mb     AQ284133.1 T7,
AZ519784.1 SP6,
AQ284130.1 SP6
3 RP11-79O5 C 3p12(FHCRC)
chr3 76Mb     AQ317655.1 SP6,
AQ282329.1 T7
3 RP11-81D17 C 3p12(FHCRC)
chr3 83Mb AC018918.15   AZ521538.1 SP6,
AQ281061.1 SP6,
AZ521540.1 T7,
AQ281063.1 T7
3 RP11-81P15 C 3p12(FHCRC)
chr3 87Mb AC012221.3,
  AQ282058.1 SP6,
AQ282060.1 T7
3 RP11-220O14 R 3p12.3b(NCI)
chr3 77Mb AC016952.16      
3 RP11-447J13 R 3p12.1b(NCI)
chr3 86Mb AC013496.3,
3 RP11-80H24 C 3p12.1(FHCRC)
chr3 83Mb     AQ284106.1 SP6,
AQ284111.1 T7
3 RP11-8M11 C 3p12.1(FHCRC)
chr3 86Mb   AFM294ZF9, AFM294ZF9*u B72415.1 T7  
3 RP11-91A15 C 3p11~3q11.1(FHCRC)
chr3 89Mb AC026305.20   AQ286316.1 SP6,
AQ286318.1 T7
3 RP11-424C9 R 3p11.1b(NCI)
chr3 87Mb AC024427.3      
3 RP11-129G16 C 3q11.2(FHCRC)
chr3 102Mb AC018353.14*d AFM126ZC5, AFM126ZC5*u   multiple_placements_on_genome
3 RP11-129G16 C 3q11.2(FHCRC)
chr3 54Mb AC018353.14 AFM126ZC5*d, AFM126ZC5*u   multiple_placements_on_genome
3 RP11-227H4 C 3q11.2(FHCRC)
chr3 99Mb AC021660.16      
3 RP11-79K12 C 3q11.2(FHCRC)
chr3 98Mb AC076969.6*u   AZ519184.1 SP6,
AQ283173.1 SP6,
AQ581445.1 SP6,
AQ283176.1 T7,
AQ581447.1*u T7
3 RP11-91M15 C 3q11.2(FHCRC)
chr3 96Mb AC067740.11   AQ282283.1 T7,
AQ286875.1 SP6
3 RP11-285J14 C 3q11.2~12(FHCRC)
chr3 95Mb   AFMB304WG9    
3 RP11-449F7 CR 3q11.2b~11.2c(NCI)
chr3 99Mb AC026100.19   BH900353.1 T7,
AQ584384.1 T7,
BH900354.1 SP6,
AQ584381.1*u SP6
3 CTB-9O5 R 3q12.1~12.2(CSMC)
chr3 100Mb   AFMA065XF5    
3 CTA-395D5 R 3q12(CSMC)
chr3 101Mb   WI-8558    
3 RP11-398O21 C 3q12~13.1(FHCRC)
chr3 101Mb AC069223.15      
3 CTD-2014B13 C 3q12(FHCRC)
chr3 100Mb     B58820.1 ,
AQ225194.1 SP6,
B58821.1 SP6,
AQ305078.1*u T7
3 RP11-114I8 R 3q12.2b(NCI)
chr3 101Mb AC015462.6,
  AQ346420.1 T7,
AQ346417.1 SP6
3 RP11-16N5 C 3q13.1(FHCRC)
chr3 106Mb AC023602.5 R13558 B82571.1 T7,
BZ369510.1 T7
3 RP11-37D12 C 3q13.1(FHCRC)
chr3 109Mb   AFM348TE9, AFM348TE9*u    
3 RP11-482E8 C 3q13.1(FHCRC)
chr3 107Mb AC079946.11   AZ518458.1 T7,
AQ630660.1*u SP6,
AZ518455.1*u SP6
3 RP11-69N24 C 3q13.1(FHCRC)
chr3 106Mb   AFM198ZG9, AFM198ZG9*u AQ238438.1 T7,
AQ266920.1 SP6
3 RP11-90I13 C 3q13.1(FHCRC)
chr3 108Mb     AQ281689.1 SP6,
AQ281692.1 T7
3 RP11-90I19 C 3q13.1(FHCRC)
chr3 105Mb     AQ281803.1 T7,
AQ281800.1 SP6
3 RP11-91B3 C 3q13.1(FHCRC)
chr3 106Mb AC016138.8   AQ283215.1 SP6,
AQ283216.1 T7
3 RP11-129P2 C 3q13.1~13.2(FHCRC)
chr3 109Mb AC026323.11*u AFM348TE9, AFM348TE9*u    
3 RP11-166C10 C 3q13.1~13.2(FHCRC)
chr3 109Mb AC016932.17 AFM225XB12, AFM225XB12*u AQ379897.1*u T7  
3 RP11-861A13 C 3q13.1~13.2(FHCRC)
chr3 109Mb AC012020.17      
3 RP11-490H13 R 3q13.11b(NCI)
chr3 104Mb AC017085.5,
  CL423051.1 SP6,
CL423056.1*u T7
3 RP11-161J9 R 3q13.13a(NCI)
chr3 109Mb AC019169.3,
  AQ380075.1 T7,
AQ380071.1 SP6
3 RP11-71D1 R 3q13.13b(NCI)
chr3 110Mb AC074342.2   AQ236969.1 T7,
AQ267885.1 SP6
3 RP11-745L2 R 3q13.13d(NCI)
chr3 112Mb AC092907.7   CL423083.1 SP6,
CL423088.1 T7,
AQ453890.1 T7
3 RP11-12P11 C 3q13.2(FHCRC)
chr3 112Mb   AFM259VA9 B75962.1 SP6,
B75963.1 T7
3 RP11-5K13 C 3q13.2(FHCRC)
chr3 114Mb   AFM321XF5, AFM321XF5*u B63953.1 SP6,
B63954.1 T7,
B49259.1 T7
3 RP11-153K19 C 3q13.2~13.3(FHCRC)
chr3 114Mb AC021655.21 AFMB353ZE1 AQ386412.1 SP6,
AQ386414.1 T7
3 RP11-23J16 C 3q13.2~13.3(FHCRC)
chr3 113Mb AC060225.12   AQ013837.1 ,
AQ013834.1 ,
B88177.1*u SP6
3 RP11-79H17 C 3q13.2~13.3(FHCRC)
chr3 113Mb AC026354.25   AQ284249.1 SP6,
AQ284252.1 T7
3 RP11-24O5 R 3q13.2b(NCI)
chr3 114Mb AC021695.4,
  B84493.1 T7,
B92272.1 SP6
3 RP11-342J15 R 3q13.31a(NCI)
chr3 115Mb AC068978.13   CL423119.1 SP6,
CL423124.1*u T7
3 RP11-165B13 C 3q13.3(FHCRC)
chr3 119Mb AC020650.11 AFMB322ZF1 AQ415251.1 SP6,
AQ382248.1 T7
3 RP11-190C22 C 3q13.3(FHCRC)
chr3 120Mb AC073352.22      
3 RP11-214A5 C 3q13.3(FHCRC)
chr3 116Mb   AFM164XC5, AFM164XC5*u    
3 RP11-220G20 C 3q13.3(FHCRC)
chr3 118Mb AC021867.19 AFM057XA5, AFM057XA5*u    
3 RP11-233L3 C 3q13.3(FHCRC)
chr3 119Mb AC016918.15 AFM225YD6, AFM225YD6*u    
3 RP11-289N10 C 3q13.3(FHCRC)
chr3 123Mb AC068630.21      
3 RP11-574C8 C 3q13.3(FHCRC)
chr3 118Mb AC026984.1      
3 RP11-71H17 C 3q13.3(FHCRC)
chr3 125Mb AC022336.12 AA426227 AQ237037.1 T7,
AQ268576.1 SP6
3 RP11-73F12 C 3q13.3(FHCRC)
chr3 121Mb AC078856.13   AQ267561.1 SP6  
3 RP11-91D13 C 3q13.3(FHCRC)
chr1 76Mb AC079307.4   AQ283292.1 SP6,
AQ283295.1 T7
3 RP11-91F9 C 3q13.3(FHCRC)
chr3 119Mb AC023793.13   AQ283336.1 SP6,
AZ519287.1 T7,
AQ283338.1 T7
3 RP11-169N13 C 3q13.3~21(FHCRC)
chr3 120Mb AC069444.17 AFMB280XB1 AQ416519.1 SP6  
3 RP11-217P4 C 3q13.3~21(FHCRC)
chr3 124Mb   AFM116XH2, AFM116XH2*u    
3 RP11-79M2 C 3q13.3~21(FHCRC)
chr3 123Mb AC068754.16   AZ519189.1 SP6,
AQ283212.1 SP6,
AQ283219.1 T7,
AQ581485.1*u T7
3 RP11-217N3 R 3q13.31b(NCI)
chr3 116Mb AC119795.2   CL423150.1 SP6,
CL423155.1 T7
3 RP11-373C21 R 3q13.31c(NCI)
chr3 118Mb AC026762.17   CL423187.1 T7,
CL423183.1 SP6
3 RP11-359H3 R 3q13.33b(NCI)
chr3 121Mb AC012534.3,
  BZ369560.1 T7,
AQ539952.1 T7,
AQ539950.1 SP6,
BZ369561.1 SP6
3 RP11-10G15 R 3q13.33c(NCI)
chr3 122Mb AC079841.10   B72825.1 T7,
B72824.1 SP6
3 CTA-391E7 R 3q21(CSMC)
chr3 132Mb   D3S3348    
3 CTB-43D3 R 3q21(CSMC)
chr3 136Mb   AFM302WA5    
3 RP11-205A6 C 3q21(FHCRC)
chr3 127Mb AC016924.19 AFM290ZF1, AFM290ZF1*u AQ419300.1 SP6  
3 RP11-59J16 C 3q21(FHCRC)
chr3 128Mb AC016968.24 AFMB020ZB9 BZ369545.1 SP6,
AQ200043.1 ,
BZ369544.1 T7
3 RP11-61K12 C 3q21(FHCRC)
chr3 128Mb AC011199.22,
R11698 AQ194256.1 ,
3 RP11-95H16 C 3q21(FHCRC)
chr3 125Mb AC069233.16 AFM119YH2, AFM119YH2*u AQ315994.1 SP6  
3 RP11-563J15 R 3q21.1b(NCI)
chr3 124Mb AC073243.3*u   CL423044.1 SP6,
CL423048.1 T7
3 RP11-25L9 R 3q21.2a(NCI)
chr3 125Mb AC016307.4,
  B89479.1 SP6,
B82128.1 T7
3 RP11-578N15 R 3q21.2c(NCI)
chr3 126Mb AC016959.20   AQ332378.1 SP6,
AQ332066.2*u T7
3 RP11-525K18 R 3q21.3c(NCI)
chr3 129Mb AC011311.11   BZ369532.1 SP6,
BZ369531.1 T7
3 RP11-452H12 R 3q21.3c~21.3d(NCI)
chr3 130Mb AC016951.9*d   AQ583127.1 T7,
AQ583123.1 SP6
3 RP11-452H12 R 3q21.3c~21.3d(NCI)
chr3 136Mb AC016951.9   AQ583123.1*d SP6,
AQ583127.1*d T7
3 CTD-2121C12 R 3q22(UCSF)
chr3 130Mb     AQ708952.1 T7  
3 RP11-21N8 C 3q22(FHCRC)
chr3 131Mb AC023438.3   B84065.1 SP6,
AQ008942.1 T7,
B84066.1 T7
3 RP11-220J13 C 3q22(FHCRC)
chr3 136Mb AC016919.15 AFM347YG1, AFM347YG1*u    
3 RP11-384O14 C 3q22(FHCRC)
chr3 138Mb AC023402.3,
3 RP11-717C3 C 3q22(FHCRC)
chr3 126Mb AC092983.13, AC026612.3*d   AQ460386.1*u SP6 multiple_placements_on_genome
3 RP11-717C3 C 3q22(FHCRC)
chr3 187Mb AC026612.3, AC092983.13*d   AQ460386.1*u SP6 multiple_placements_on_genome
3 RP11-79L21 C 3q22(FHCRC)
chr3 133Mb AC018916.16   AQ285013.1 SP6,
AQ285027.1 T7
3 RP11-79L9 C 3q22(FHCRC)
chr3 139Mb AC020890.22   AQ284970.1 T7,
AQ284966.1 SP6
3 RP11-80F6 C 3q22(FHCRC)
chr3 136Mb AC018548.12*u   AQ284002.1 SP6  
3 RP11-886L15 R 3q22(UCSF)
chr3 137Mb   AFM141XA3 AQ526364.1 T7  
3 RP11-91K8 C 3q22(FHCRC)
chr3 134Mb AC022296.34   AQ282622.1 SP6,
AQ282625.1 T7
3 RP11-91O5 C 3q22(FHCRC)
chr3 136Mb AC015539.13   AQ282505.1 SP6,
AQ282507.1 T7
3 RP11-219P10 C 3q22~23(FHCRC)
chr3 137Mb   AFM141XA3    
3 RP11-80P20 3q22~23(FHCRC)
chr3 139Mb AC022497.18   AQ319869.1 SP6,
AZ521489.1*u T7
3 CTD-2125O15 C 3q22(FHCRC)
chr3 136Mb     AQ701488.1 T7,
AQ701653.1 SP6
3 RP11-446K3 R 3q22.1c(NCI)
chr3 133Mb AC021659.16   CL423154.1 T7,
CL423149.1 SP6
3 RP11-883M5 R 3q22.1e(NCI)
chr3 134Mb AC016255.24   CL423157.1 SP6,
CL423160.1 T7
3 RP11-197K1 R 3q22.3a(NCI)
chr3 137Mb AC069514.19      
3 RP11-566E10 R 3q22.3a~22.3b(NCI)
chr3 137Mb AC017107.4,
  CL423022.1 T7,
CL423017.1 SP6
3 RP11-630C21 R 3q22.3b(NCI)
chr3 138Mb AC015652.6,
  AQ401441.1 SP6,
AQ402523.1*u T7
3 RP11-548O1 R 3q22.3c(NCI)
chr3 140Mb AC092947.12   CL423050.1 SP6,
CL423055.1 T7
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 CTA-394C3 R 3q23(CSMC)
chr3 146Mb   D3S3062    
3 CTB-17D17 R 3q23(CSMC)
chr3 142Mb   AFMA061YG1    
3 CTB-17G11 R 3q23(CSMC)
chr3 146Mb   AFMA041ZG9    
3 CTB-2O3 R 3q23(CSMC)
chr3 137Mb   D3S1549    
3 CTB-43E16 R 3q23(CSMC)
chr3 142Mb   AFMA061YG1    
3 CTB-5P8 R 3q23(CSMC)
chr3 138Mb   D3S3617    
3 RP11-162J10 C 3q23(FHCRC)
chr3 138Mb AC020788.14 AFM267XD9 AQ377322.1 T7,
AQ377319.1 SP6
3 RP11-89E16 C 3q23(FHCRC)
chr3 141Mb AC117396.2   AQ282756.1 T7,
AZ517032.1 SP6,
AQ282753.1 SP6
3 CTB-16P22 R 3q24~23(CSMC)
chr3 144Mb   AFMA106YF9    
3 RP11-160A13 C 3q23~24(FHCRC)
chr3 144Mb AC020648.11 AFMA106YF9 AQ374615.1 T7,
AQ374613.1 SP6
3 RP11-165M11 C 3q23~24(FHCRC)
chr3 144Mb AC016934.22 AFM240XB2, AFM240XB2*u AQ414594.1 T7  
3 RP11-166D18 C 3q23~24(FHCRC)
chr3 140Mb AC016933.20 AFMA121WD5 AQ380950.1 T7,
AQ419849.1*u SP6
3 RP11-372E1 C 3q23~24(FHCRC)
chr3 144Mb AC021074.15      
3 RP11-80H8 C 3q23~24(FHCRC)
chr3 144Mb AC018450.26   AQ284062.1 SP6,
AQ284065.1 T7
3 RP11-217F11 R 3q23c(NCI)
chr3 141Mb AC022479.3,
  CL423087.1 T7  
3 RP11-429A8 R 3q23d(NCI)
chr3 142Mb AC073364.9*u   CL423118.1 SP6,
CL423123.1 T7
3 RP11-260J24 R 3q24a(NCI)
chr3 145Mb AC012219.5,
  BH900393.1 SP6,
AQ481939.1 SP6,
AZ520932.1 T7,
BH897891.1 T7
3 CTB-15K2 R 3q24(CSMC)
chr3 152Mb   D3S1315    
3 CTC-233H16 R 3q24(UCSF)
chr3 133Mb   D3S3514    
3 CTD-2222H2 R 3q24(UCSF)
chr3 149Mb     AQ142655.1 SP6  
3 RP11-112O24 C 3q24(FHCRC)
chr3 139Mb AC018357.16   AQ312438.1 SP6,
BH900385.1 SP6,
BH900384.1 T7,
AQ312439.1 T7
3 RP11-1146E5 R 3q24(UCSF)
chr3 170Mb     AQ698393.1 T7,
AQ707979.1*u SP6
3 RP11-11L20 C 3q24(FHCRC)
chr3 150Mb AC013626.3,
AA459632 B75628.1 T7,
B75627.1 SP6
3 RP11-145F16 C 3q24(FHCRC)
chr3 151Mb AC018545.14 AFM220YH12, AFM220YH12*u AQ375287.1 SP6,
AQ375289.1 T7
3 RP11-229G6 C 3q24(FHCRC)
chr3 150Mb   AFM056XF12, AFM056XF12*u AQ487626.1 SP6,
AQ487627.1*u T7
3 RP11-464E15 C 3q24(FHCRC)
chr3 150Mb AC021059.25      
3 RP11-600P18 C 3q24(FHCRC)
chr3 152Mb AC078816.16      
3 RP11-72E23 C 3q24(FHCRC)
chr3 146Mb AC016967.24 AFM210VE7, AFM210VE7*u AQ267021.1 T7,
AQ285099.1 SP6
3 RP11-85F14 C 3q24(FHCRC)
chr3 138Mb AC011597.27   BZ369586.1 SP6  
3 RP11-88H10 C 3q24(FHCRC)
chr3 147Mb AC055758.23   AQ286778.1 SP6,
AZ516229.1 T7,
AQ286792.1 T7
3 RP11-89I2 3q24(FHCRC)
chr3 149Mb     AQ282860.1 SP6,
AQ282862.1 T7,
AZ517095.1*u SP6
3 RP11-89L22 C 3q24(FHCRC)
chr3 154Mb     AQ286617.1 T7,
AQ286615.1*u SP6
3 RP11-91G2 C 3q24(FHCRC)
chr3 153Mb     AQ285559.1 T7,
AQ285556.1 SP6
3 CTA-393C7 R 3q24~25(CSMC)
chr3 150Mb   D3S3098    
3 RP11-209H21 C 3q24~25(FHCRC)
chr20 18Mb AC012401.4*d AFM200ZE11*d, AFM200ZE11*u BZ369516.1 T7,
BZ369517.1 SP6
3 RP11-209H21 C 3q24~25(FHCRC)
chr3 160Mb AC012401.4 AFM200ZE11, AFM200ZE11*u BZ369516.1*d T7,
BZ369517.1*d SP6
3 RP11-270G15 C 3q24~25(FHCRC)
chr3 156Mb AC012220.5,
  AQ485333.1 T7,
AQ485331.1 SP6
3 RP11-451C20 C 3q24~25(FHCRC)
chr3 155Mb     AQ583106.1 SP6,
AQ583115.1 T7
3 RP11-64F6 C 3q24~25(FHCRC)
chr3 152Mb   AFM164YG9, AFM164YG9*u AQ241005.1 SP6,
AQ241006.1 T7
3 RP11-65L11 C 3q24~25(FHCRC)
chr3 152Mb   AFM277WF9*u AQ194214.1 ,
AQ237223.1 SP6
3 RP11-80I14 C 3q24~25(FHCRC)
chr3 153Mb   AFM177XE9, AFM177XE9*u AQ282534.1 SP6  
3 RP11-78O22 R 3q24d~24e(NCI)
chr3 148Mb AC026135.2,
  AQ285678.1 SP6  
3 RP11-505J9 R 3q24e(NCI)
chr3 149Mb AC024897.23   CL423186.1 T7,
CL423182.1 SP6
3 CTB-21K12 R 3q25(CSMC)
chr3 162Mb   AFMA218YG1    
3 CTB-45H21 R 3q25(CSMC)
chr3 163Mb   AFMB323YB1    
3 CTB-45M11 R 3q25(CSMC)
chr3 162Mb   AFMA218YG1    
3 CTB-6M15 R 3q25(CSMC)
chr3 161Mb   AFM164YE7    
3 RP11-194A15 C 3q25(FHCRC)
chr3 157Mb AC010935.3,
  BH900389.1 T7,
BH900390.1 SP6
3 RP11-79A14 C 3q25(FHCRC)
chr3 158Mb AC063937.10   AQ628779.1 T7,
AQ282389.1 T7,
AQ580454.1 SP6,
AQ282386.1 SP6
3 RP11-89F24 C 3q25(FHCRC)
chr3 159Mb     AQ285853.1 T7,
AQ285851.1*u SP6
3 RP11-91L9 C 3q25(FHCRC)
chr3 159Mb AC012027.21   AQ284142.1 SP6,
AQ284143.1 T7
3 RP11-103G8 C 3q25~26.1(FHCRC)
chr3 151Mb AC011317.23   AQ312269.1 T7,
AQ312267.1 SP6
3 RP11-203L15 C 3q25~26.1(FHCRC)
chr3 162Mb AC016920.14 AFMA218YG1 AQ419335.1 SP6,
AQ419337.1 T7
3 RP11-79M21 R 3q25.32b(NCI)
chr3 159Mb AC025033.20   AZ519124.1 SP6,
AQ317651.1 SP6
3 RP11-91F17 C 3q25~26.1(FHCRC)
chr3 167Mb     AQ283344.1 SP6,
AQ283347.1 T7
3 RP11-91M24 C 3q25~26.1(FHCRC)
chr3 161Mb     AQ282752.1 SP6,
AQ282755.1 T7
3 RP11-63E16 R 3q25.1b(NCI)
chr3 151Mb AC022494.25   CL423047.1 T7,
CL423043.1 SP6,
3 RP11-385G14 R 3q25.1c(NCI)
chr3 152Mb AC108726.9   CL423081.1 T7,
CL423076.1 SP6
3 RP11-362A9 R 3q25.2a(NCI)
chr3 153Mb AC026347.17   BZ369526.1 SP6,
BZ369525.1 T7
3 RP11-372M20 R 3q25.2b(NCI)
chr3 154Mb AC024537.2,
  AQ529572.1 T7  
3 RP11-286N6 R 3q25.2c~25.31a(NCI)
chr3 156Mb AC110152.13   CL423115.1 T7,
CL423110.1 SP6
3 RP11-392A22 CR 3q25.31a~25.31b(NCI)
chr3 157Mb AC024165.3,
  CL423054.1 T7,
CL423049.1 SP6
3 RP11-141C22 C 3q26.1(FHCRC)
chr3 170Mb AC067720.15 AFM179XH10, AFM179XH10*u AQ385885.1 SP6,
AQ385887.1 T7
3 RP11-198G24 C 3q26.1(FHCRC)
chr3 165Mb AC018457.14 AFM116XH4    
3 RP11-264D7 C 3q26.1(FHCRC)
chr3 168Mb AC069530.14 AFMB353YA9 AQ487231.1 T7,
AQ487229.1 SP6
3 RP11-379K17 C 3q26.1(FHCRC)
chr1 217Mb AC008040.7*d   AQ551430.1 SP6,
AQ551432.1 T7
3 RP11-379K17 C 3q26.1(FHCRC)
chr3 171Mb AC008040.7   AQ551430.1*d SP6,
AQ551432.1*d T7
3 RP11-491K7 C 3q26.1(FHCRC)
chr3 166Mb AC009811.14   BH900374.1*d T7,
BH900375.1*d SP6
3 RP11-491K7 C 3q26.1(FHCRC)
chr16 82Mb AC009811.14*d   BH900375.1 SP6,
BH900374.1 T7
3 RP11-67F24 C 3q26.1(FHCRC)
chr3 161Mb AC026118.17 AI304577 AQ198897.1 ,
AZ518960.1 T7
3 RP11-79F11 C 3q26.1(FHCRC)
chr3 165Mb   AFM116XH4 AQ284158.1 T7,
AQ284155.1 SP6
3 RP11-79G24 C 3q26.1(FHCRC)
chr3 163Mb AC024905.11   AQ581401.1 SP6,
AZ519173.1 SP6,
AQ283083.1 SP6,
AQ629620.1 T7
3 RP11-80L14 C 3q26.1(FHCRC)
chr3 165Mb AC018917.17   AQ317796.1 SP6,
AQ284165.1 T7
3 RP11-89N16 C 3q26.1(FHCRC)
chr3 162Mb     AQ286657.1 T7,
AQ286655.1*u SP6
3 RP11-90M7 C 3q26.1(FHCRC)
chr3 164Mb AC024906.22   AQ283740.1 T7,
AQ283737.1 SP6
3 RP11-90N21 C 3q26.1(FHCRC)
chr3 158Mb AC026306.13   AZ518641.1 T7,
AQ285210.1 T7,
AQ285208.1 SP6
3 RP11-91B7 C 3q26.1(FHCRC)
chr3 168Mb     AQ283223.1 T7,
AQ283220.1 SP6
3 CTB-164C23 R 3q26(UCSF)
chr3 184Mb   WI-6365    
3 CTD-2172D17 R 3q26(UCSF)
chr3 185Mb     B93409.1 SP6,
B93406.1*u ,
AQ010278.1*u SP6,
AQ065050.1*u T7
3 RP11-102G2 R 3q26(UCSF)
chr3 184Mb     AQ312374.1 T7,
AQ312371.1 SP6
3 RP11-147L6 R 3q26(UCSF)
chr3 191Mb   d3S2472    
3 RP11-151A21 R 3q26(UCSF)
chr3 173Mb AC026312.18 D3S2433, AFMA082ZD9 AQ376269.1 SP6,
AQ376270.1 T7
3 RP11-153J6 R 3q26(UCSF)
chr3 171Mb   WI-14970 AQ416537.1 SP6,
AQ389521.1 T7
3 RP11-163H6 C 3q26(UCSF)
chr3 173Mb AC020649.9,
AFMA082ZD9, WI-18033*d AQ380833.1 T7,
AQ380830.1*u SP6
3 RP11-163H6 C 3q26(UCSF)
chr3 182Mb AC020649.9*d,
WI-18033, AFMA082ZD9*d AQ380833.1*d T7,
AQ380830.1*u SP6
3 RP11-178A9 R 3q26(UCSF)
chr3 179Mb   AFMA110YE9    
3 RP11-198D7 R 3q26(UCSF)
chr3 174Mb   AFM164TC7, AFM164TC7*u AQ416866.1 T7,
AQ416864.1 SP6
3 RP11-202K4 R 3q26(UCSF)
chr3 171Mb   D3S1564, AFM224YA3, D3S3723    
3 RP11-212J11 R 3q26(UCSF)
chr3 179Mb   AFMA110YE9 AQ482478.1*u SP6  
3 RP11-234D2 R 3q26(UCSF)
chr3 173Mb AC026322.12 AFMA064YC1*d, D3S1754*d   multiple_placements_on_genome
3 RP11-234D2 R 3q26(UCSF)
chr3 178Mb AC026322.12*d AFMA064YC1, D3S1754   multiple_placements_on_genome
3 RP11-25D9 R 3q26(UCSF)
chr3 173Mb   AFMA082ZD9 AQ013478.1 ,
B82068.1 T7,
AQ013480.1 ,
B82067.1 SP6
3 RP11-278A4 R 3q26(UCSF)
chr3 178Mb AC117445.12   AQ506157.1 T7,
AQ506156.1 SP6
3 RP11-301K17 R 3q26(UCSF)
chr3 171Mb   D3S3114    
3 RP11-315C21 R 3q26(UCSF)
chr3 171Mb   D3S3723 AQ538509.1 T7,
AQ538508.1 SP6
3 RP11-350E2 R 3q26(UCSF)
chr3 178Mb   WI-1347 AZ516352.1 T7  
3 RP11-355N16 R 3q26(UCSF)
chr3 180Mb     AQ534920.1 T7,
AQ534919.1 SP6
3 RP11-361D1 R 3q26(UCSF)
chr3 171Mb   D3S1564 AQ542065.1 T7,
AQ542064.1 SP6
3 RP11-383C10 R 3q26(UCSF)
chr3 83Mb   D3S1254    
3 RP11-41J24 R 3q26(UCSF)
chr3 177Mb   D3S3676 AQ029707.1*u T7  
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
3 RP11-44A1 S 3q26.1~26.33(SC)
chr3 173Mb AC007051.3   AQ195145.1  
3 RP11-45I24 R 3q26(UCSF)
chr3 180Mb AC015620.3 AFMA162XB9, WI-16592 AQ201243.1 ,
3 RP11-517E12 R 3q26(UCSF)
chr3 178Mb   D3S3097    
3 RP11-51A1 R 3q26(UCSF)
chr3 180Mb AC007653.5 AFMA162XB9 BH900376.1 T7,
AQ052255.1 ,
BH900377.1 SP6
3 RP11-58C19 R 3q26(UCSF)
chr3 173Mb   AFM333YA5 AQ195902.1  
3 RP11-478O19 R 3q26.1c(NCI)
chr3 166Mb AC073289.12   AQ634134.1 SP6,
AQ634138.1 T7
3 RP11-190F16 R 3q26.1d(NCI)
chr3 167Mb AC084016.12      
3 RP11-297J9 R 3q26.1e(NCI)
chr3 168Mb AC024891.16   AQ505076.1 T7  
3 RP11-250A4 R 3q26.2a(NCI)
chr3 170Mb AC024099.23      
3 CTB-50E20 R 3q26.2(CSMC)
chr3 171Mb   D3S3723    
3 RP11-148D23 C 3q26.2(FHCRC)
chr3 174Mb   AFM224ZB12, AFM224ZB12*u AQ375695.1 SP6,
AQ375698.1 T7
3 RP11-151P12 C 3q26.2(FHCRC)
chr3 171Mb   D3S1564, AFM224YA3 AQ379734.1 SP6,
AQ379735.1 T7
3 RP11-24L16 C 3q26.2(FHCRC)
chr3 169Mb   AFM345TH5, AFM345TH5*u    
3 RP11-449B7 C 3q26.2(FHCRC)
chr3 168Mb     AQ584212.1 T7,
AQ584208.1*u SP6
3 RP11-33A1 C 3q26.2~26.3(FHCRC)
chr3 170Mb AC007480.3,
AA181023 AQ045438.1 ,
3 RP11-79O17 C 3q26.2~26.3(FHCRC)
chr3 170Mb     AZ519133.1 SP6,
AQ317690.1 SP6
3 RP11-91A17 C 3q26.2~26.3(FHCRC)
chr3 175Mb     AQ286322.1 T7,
AQ286320.1 SP6
3 RP11-26K1 R 3q26.2b~26.2c(NCI)
chr3 172Mb AC026321.9*u   CL423086.1 T7,
CL423082.1 SP6
3 RP11-196F13 CR 3q26.2c~26.31a(NCI)
chr3 173Mb AC016938.24 AFM333YA5    
3 CTB-56B5 R 3q26.3(CSMC)
chr3 180Mb   AFMA162XB9    
3 RP11-114M1 C 3q26.3(FHCRC)
chr3 178Mb AC026355.13 AFMA064YC1 AQ345488.1 T7,
AQ345485.1 SP6
3 RP11-172G5 C 3q26.3(FHCRC)
chr3 174Mb AC018456.18 AFM164TC7, AFM164TC7*u AQ422718.1 SP6  
3 RP11-82C9 C 3q26.3(FHCRC)
chr3 170Mb AC078985.14 AFM179XH10, AFM179XH10*u    
3 RP11-89B3 C 3q26.3(FHCRC)
chr3 180Mb   AFMA162XB9 AZ517716.1 T7  
3 RP11-89J17 C 3q26.3(FHCRC)
chr3 175Mb AC016936.15   AQ284773.1 T7,
AQ284771.1 SP6
3 RP11-91K9 C 3q26.3(FHCRC)
chr3 178Mb AC012031.17   AQ281524.1 T7,
AQ281521.1 SP6
3 RP11-118F4 C 3q26.3~27(FHCRC)
chr3 180Mb AC048335.10 AFMA162XB9 AQ349290.1 SP6  
3 RP11-125E8 C 3q26.3~27(FHCRC)
chr3 185Mb AC078797.20 D3S3609    
3 RP11-245C23 C 3q26.3~27(FHCRC)
chr3 180Mb AC076966.25   AQ487241.1 SP6  
3 RP11-292L5 R 3q26.31c(NCI)
chr3 176Mb AC008180.15      
3 RP11-253H10 R 3q26.31d~26.32a(NCI)
chr3 179Mb AC026317.13   CL423122.1 T7,
CL423117.1 SP6
3 RP11-510K16 R 3q26.33a(NCI)
chr3 181Mb AC025999.3,
3 RP11-275H4 R 3q26.33b~26.33c(NCI)
chr3 182Mb AC068308.12      
3 RP11-259I19 R 3q26.33c(NCI)
chr3 183Mb AC024104.15   AQ484803.1 SP6,
AQ484806.1 T7
3 CTA-358G6 R 3q27(CSMC)
chr3 189Mb   D3S3651    
3 CTA-433E10 R 3q27(CSMC)
chr3 185Mb   D3S3609    
3 CTB-47H7 R 3q27(CSMC)
chr3 185Mb   AFMA217ZH5    
3 CTB-47I8 R 3q27(CSMC)
chr3 185Mb   AFMA217ZH5    
3 RP11-410F19 C 3q27(FHCRC)
chr3 187Mb AC009247.13   AQ549693.1 T7,
AQ535500.1 SP6
3 RP11-63G1 C 3q27(FHCRC)
chr3 185Mb   SHGC-35471 AQ196287.1 ,
3 RP11-63M3 C 3q27(FHCRC)
chr3 185Mb   SHGC-35471 AQ201780.1 ,
3 RP11-79K10 C 3q27(FHCRC)
chr3 186Mb     AQ283170.1 T7,
AZ519183.1 SP6,
AQ283167.1 SP6,
AQ629666.1*u T7
3 RP11-88P6 C 3q27(FHCRC)
chr3 188Mb AC018919.13   AQ286888.1 T7,
AZ516908.1 T7,
AZ516906.1 SP6,
AQ286886.1 SP6
3 RP11-119E13 C 3q27~28(FHCRC)
chr3 187Mb AC012149.11      
3 RP11-12L14 CR 3q27.1a(NCI)
chr3 184Mb AC013631.2,
T69473 B75882.1 SP6,
B75883.1 T7
3 RP11-211G3 C 3q27~28(FHCRC)
chr3 188Mb AC072022.19      
3 RP11-328G15 C 3q27~28(FHCRC)
chr3 185Mb AC112643.12 X75208    
3 RP11-640P3 C 3q27~28(FHCRC)
chr3 188Mb AC080010.11   AQ411097.1 T7,
AQ496050.1*u SP6
3 RP11-379C23 R 3q27.2a(NCI)
chr3 187Mb AC007917.15      
3 RP11-567G11 R 3q27.3b(NCI)
chr3 188Mb AC026835.3,
3 RP11-115I8 R 3q28a(NCI)
chr3 190Mb AC018516.3,
  AQ345490.1 SP6,
AQ345493.1 T7
3 CTB-44G24 R 3q28(CSMC)
chr3 189Mb   MR12372    
3 RP11-101H7 C 3q28(FHCRC)
chr3 193Mb AC024692.3,
H19129 AQ320092.1 T7  
3 RP11-11K22 C 3q28(FHCRC)
chr3 193Mb   AFM308YF1, AFM308YF1*u B75608.1 T7,
B73175.1 SP6
3 RP11-135A1 C 3q28(FHCRC)
chr3 195Mb AC080129.26 AA459983 AQ379137.1 SP6  
3 RP11-178K17 C 3q28(FHCRC)
chr3 190Mb AC018898.17 AFM164ZF8    
3 RP11-211P13 C 3q28(FHCRC)
chr3 191Mb AC008249.14      
3 RP11-313F11 C 3q28(FHCRC)
chr3 197Mb AC016953.13   AQ528015.1 T7  
3 RP11-386D17 C 3q28(FHCRC)
chr3 185Mb   AA479058    
3 RP11-53D15 C 3q28(FHCRC)
chr3 191Mb AC016966.19 AFM207YD8, AFM207YD8*u AQ053018.1*u  
3 RP11-54L9 C 3q28(FHCRC)
chr3 191Mb AC073963.10 AFM260YB1, AFM260YB1*u AQ115238.1 ,
3 RP11-67E18 C 3q28(FHCRC)
chr3 189Mb AC055711.18 AFM270ZG9, AFM270ZG9*u AQ201693.1  
3 RP11-88H6 C 3q28(FHCRC)
chr3 192Mb     AQ286766.1 SP6,
AZ516226.1 T7,
AQ286769.1 T7
3 RP11-88M1 C 3q28(FHCRC)
chr3 193Mb AC055742.18*u AFM308YF1, AFM308YF1*u    
3 RP11-91M9 C 3q28(FHCRC)
chr3 193Mb AC026671.18   AQ281615.1 T7,
AQ281611.1 SP6
3 RP11-1D19 C 3q28~29(FHCRC)
chr3 196Mb AC022177.2,
  B48337.1 T7,
AQ315738.1*u SP6
3 RP11-373I6 C 3q28~29(FHCRC)
chr3 190Mb AC063939.15      
3 RP11-455C22 R 3q28b(NCI)
chr3 191Mb AC012222.3,
  BZ369573.1 SP6,
BZ369572.1 T7,
AQ586818.1*u T7
3 RP11-332P22 R 3q28c(NCI)
chr3 192Mb AC026665.5,
  CL423148.1 SP6,
CL423153.1 T7
3 RP11-608P9 R 3q28d(NCI)
chr3 192Mb AC025512.2,
  AQ359925.1 SP6,
AQ367090.1 T7
3 RP11-326J2 R 3q28e~29a(NCI)
chr3 194Mb AC026529.2,
  AQ538797.1 SP6  
3 RP11-233N20 C 3q29(FHCRC)
chr3 198Mb   AFM136XC1, AFM136XC1*u    
3 RP11-432D10 C 3q29(FHCRC)
chr3 198Mb AC068302.18      
3 RP11-436M6 C 3q29(FHCRC)
chr3 196Mb AC009099.6,
3 RP11-480A16 R 3q29d(NCI)
chr3 197Mb AC024937.21   CL423180.1 SP6,
CL423181.1 T7
total461C:278 R:187 S:2461461 305198308 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.