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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones

FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
15 CTA-476G6 R 15q11.2(CSMC)
chr15 20Mb   HSC15C102    
15 CTD-2018N9 C 15q11.2(FHCRC)
chr15 23Mb   Hs.180686    
15 RP11-1081A4 C 15q11.2(FHCRC)
chr15 23Mb     AQ740187.1 T7,
AQ744667.1 SP6
15 RP11-171C8 C 15q11.2(FHCRC)
chr15 22Mb   SHGC-36523 AZ519498.1 SP6,
AZ520009.1 T7
15 RP11-218M19 C 15q11.2(FHCRC)
chr15 21Mb   SHGC-35648    
15 RP11-32B5 C 15q11.2~12(FHCRC)
chr15 19Mb AC068446.22      
15 RP11-441B20 C 15q11.2~12(FHCRC)
chr15 22Mb AC080077.3   AQ585663.1 T7,
AQ585662.1 SP6
15 RP11-87I21 C 15q11.2~12(FHCRC)
chr15 22Mb   SHGC-31492    
15 RP11-373J1 R 15q11.2e(NCI)
chr15 21Mb   RH54328 AZ301786.2 SP6,
AZ301785.2 T7
15 RP11-307C10 R 15q12a(NCI)
chr15 20Mb   RH10708 AZ301243.2 T7,
AZ301244.2 SP6
15 RP11-256M2 C 15q12(FHCRC)
chr15 25Mb   SHGC-12468    
15 RP11-80H14 C 15q12(FHCRC)
chr15 20Mb     AQ284081.1 SP6  
15 RP11-88P10 C 15q12(FHCRC)
chr15 23Mb     AQ281619.1 T7,
AQ286894.1 SP6
15 RP11-680F8 C 15q12~13(FHCRC)
chr15 27Mb AC022613.13   AQ464615.1 T7  
15 RP11-339C21 R 15q12c~13.1a(NCI)
chr15 23Mb   RH39531 AZ301283.2 T7,
AZ301284.2 SP6
15 CTB-21M6 R 15q13(CSMC)
chr15 27Mb   AFMA081XB9    
15 CTB-21O4 R 15q13(CSMC)
chr15 27Mb   AFMA081XB9    
15 RP11-115G22 C 15q13(FHCRC)
chr15 30Mb AC111172.1*u SHGC-12902 AQ345456.1 SP6,
AQ345458.1 T7
15 RP11-38E12 C 15q13~14(FHCRC)
chr15 30Mb AC009673.15      
15 RP11-540B6 C 15q13~14(FHCRC)
chr15 28Mb AC073220.3,
15 RP11-414N15 R 15q13.1c~13.2a(NCI)
chr15 29Mb AC130691.1*u RH77828 AZ301255.2 T7,
AZ301256.2 SP6
15 RP11-438M3 R 15q13.2a~13.2b(NCI)
chr15 28Mb   RH64897 AZ301257.2 T7,
AZ301258.2 SP6
15 RP11-303I17 R 15q13.3a~13.3b(NCI)
chr15 28Mb   RH54447 AZ301278.2 SP6,
AZ301277.2 T7
15 RP11-420B6 R 15q13.3b~13.3c(NCI)
chr15 30Mb   RH74897 AZ301297.2 T7,
AZ301298.2 SP6
15 RP11-462A2 R 15q13.3d(NCI)
chr15 33Mb   RH65444 AZ301299.2 T7,
AZ303309.2 SP6
15 RP11-347I18 R 15q14a(NCI)
chr15 32Mb   RH54191 AQ528837.1 SP6,
AZ301288.2 SP6,
AQ528838.1 T7,
AZ301287.2 T7
15 CTB-15F15 R 15q14(CSMC)
chr15 33Mb   AFMA203YB1    
15 CTB-61I12 R 15q14(CSMC)
chr15 34Mb   D15S118    
15 RP11-104L9 S 15q14(SC)
chr15 34Mb     AQ313943.1 SP6,
AQ313944.1 T7
15 RP11-111A22 R 15q14(FHCRC)
chr15 38Mb AC019054.4,
AC091045.3, AC090876.1*u
  AQ322725.1 SP6,
AQ350839.1*u T7
15 RP11-15C9 C 15q14(FHCRC)
chr15 31Mb   SHGC-20899 B82391.1 T7  
15 RP11-173E7 C 15q14(FHCRC)
chr15 34Mb   SHGC-605, SHGC-20902    
15 RP11-194H7 C 15q14(FHCRC)
chr15 32Mb   SHGC-24145 AQ412869.1 SP6  
15 RP11-1I15 C 15q14(FHCRC)
chr15 32Mb AC012272.3   B49601.1 T7,
AQ312709.1 SP6
15 RP11-201P10 C 15q14(FHCRC)
chr15 34Mb AC019016.7   AQ413659.1 T7,
AQ413657.1 SP6
15 RP11-37C7 R 15q14(FHCRC)
chr15 37Mb AC023908.6,
SHGC-31667 AQ030003.1 ,
15 RP11-380D11 R 15q14(FHCRC)
chr15 39Mb AC016134.7,
  AQ551602.1 T7,
AQ551601.1 SP6
15 RP11-3D4 C 15q14(FHCRC)
chr15 31Mb AC010809.10 SHGC-13587 B63353.1 T7,
AQ316839.1 SP6
15 RP11-70A17 C 15q14(FHCRC)
chr15 32Mb   SHGC-35611 AQ238942.1 SP6,
AQ238946.1 T7,
AZ519636.1*u T7
15 RP11-79A5 C 15q14(FHCRC)
chr15 35Mb     AZ520661.1 SP6,
AQ282171.1 SP6,
AQ282173.1 T7
15 RP11-81J11 C 15q14(FHCRC)
chr15 32Mb     AQ281672.1 SP6,
AQ281686.1 T7
15 RP11-81N9 C 15q14(FHCRC)
chr15 31Mb     AQ281889.1 SP6,
AZ516059.1 T7,
AQ281891.1 T7
15 CTD-2006D8 R 15q14~15(FHCRC)
chr15 38Mb AC025429.6   B56189.1 ,
B56190.1 SP6,
AQ222372.1*u SP6,
AQ468589.1*u T7
15 CTD-2339L15 R 15q14~15(FHCRC)
chr15 38Mb AC022405.5   AQ057032.1 SP6,
15 CTD-2559K5 R 15q14~15(FHCRC)
chr15 38Mb AC022086.2   AQ425948.1 SP6,
15 RP11-114F23 R 15q14~15(FHCRC)
chr15 41Mb AC015664.6   AQ347380.1 SP6,
AQ372600.1 T7
15 RP11-133K1 C 15q14~15(FHCRC)
chr15 38Mb AC020658.6,
SHGC-11216 AZ521426.1 SP6,
AQ384379.1*u T7
15 RP11-164J13 R 15q14~15(FHCRC)
chr15 40Mb AC012651.8, AC087759.1*u   AQ379940.1 T7,
AQ379937.1*u SP6
15 RP11-315A19 R 15q14~15(FHCRC)
chr15 41Mb AC011330.8,
RH39570 AZ301311.2 T7,
AQ538490.1 SP6,
AZ301312.2 SP6
15 RP11-325N19 R 15q14~15(FHCRC)
chr15 37Mb AC012377.5,
15 RP11-46O11 C 15q14~15(FHCRC)
chr15 37Mb   SHGC-31667 AQ199699.1 ,
15 RP11-473C18 C 15q14~15(FHCRC)
chr15 41Mb AC068724.7,
  AQ631463.1 T7,
AQ631462.1 SP6
15 RP11-62L9 C 15q14~15(FHCRC)
chr15 37Mb AC027386.3*d SHGC-9365, SHGC-13045*u AQ194284.1 ,
15 RP11-62L9 C 15q14~15(FHCRC)
chr15 37Mb AC027386.3 SHGC-9365*d, SHGC-13045*u AQ194283.1*d ,
15 RP11-516C1 R 15q14~21.1(FHCRC)
chr15 42Mb AC025043.7, AC087805.1*u      
15 RP11-477P17 R 15q14c~14d(NCI)
chr15 36Mb   RH54151 AZ301269.2 T7,
AQ636712.1 SP6,
AZ301270.2 SP6,
AQ636714.1*u T7
15 RP11-415B4 R 15q14d~15.1a(NCI)
chr15 37Mb   RH77893 AZ301295.2 T7,
AZ301296.2 SP6,
AQ547989.1*u SP6
15 CTB-4H19 R 15q15(CSMC)
chr15 37Mb   AFMA051YC1    
15 CTD-2129N1 R 15q15(FHCRC)
chr15 38Mb AC025166.7   AQ713878.1 T7,
AQ714222.1 SP6
15 CTD-2165P21 R 15q15(FHCRC)
chr15 42Mb AC025270.6   B91302.1 SP6,
B91299.1 ,
AQ125098.1 T7,
AQ296884.1*u SP6
15 RP11-117J16 C 15q15(FHCRC)
chr15 40Mb   SHGC-17218 AQ350482.1 T7  
15 RP11-127C24 C 15q15(FHCRC)
chr15 37Mb AC024707.3, AC090859.1*u      
15 RP11-151M17 R 15q15(FHCRC)
chr6 2Mb     AQ377049.1 T7,
AQ377046.1 SP6
15 RP11-18C1 C 15q15(FHCRC)
chr15 38Mb   SHGC-30151, SHGC-11216 B85473.1 T7  
15 RP11-263I19 R 15q15(FHCRC)
chr15 41Mb AC021754.6,
  AQ482241.1 SP6,
AQ482243.1 T7
15 RP11-265N6 R 15q15(FHCRC)
chr15 40Mb AC018362.8,
  AQ487812.1 SP6  
15 RP11-2D17 C 15q15(FHCRC)
chr15 40Mb   SHGC-35143 B63585.1 SP6,
B63586.1 T7
15 RP11-316F15 R 15q15(FHCRC)
chr10 9Mb AC016160.2*d   AQ506896.1 SP6,
AQ540456.1 T7
15 RP11-316F15 R 15q15(FHCRC)
chr15 38Mb AC016160.2   AQ506896.1*d SP6,
AQ540456.1*d T7
15 RP11-328J12 R 15q15(FHCRC)
chr15 39Mb AC012475.2,
RH44572 AZ301250.2 SP6,
AZ301249.2 T7
15 RP11-329C22 R 15q15(FHCRC)
chr15 41Mb AC023356.8,
15 RP11-355D13 C 15q15(FHCRC)
chr15 41Mb AC018924.9,
  AQ534018.1 SP6  
15 RP11-532F12 R 15q15(FHCRC)
chr15 85Mb AC090908.1, AC012476.8*d     multiple_placements_on_genome
15 RP11-532F12 R 15q15(FHCRC)
chr15 38Mb AC012476.8, AC090908.1*d     multiple_placements_on_genome
15 RP11-546B15 R 15q15(FHCRC)
chr15 40Mb AC022468.5,
15 RP11-78I21 C 15q15(FHCRC)
chr15 41Mb AC019011.7,
  AQ284576.1 T7,
AQ284574.1 SP6
15 RP11-79O13 C 15q15(FHCRC)
chr15 41Mb     AQ282341.1 T7,
AZ519131.1 SP6,
AQ317688.1 SP6
15 CTB-17C15 R 15q15~21.1(CSMC)
chr15 37Mb   AFM070XD7    
15 CTD-2329K10 R 15q15~21.1(FHCRC)
chr15 42Mb AC025430.5   AQ035175.1 SP6,
15 RP11-134K12 R 15q15~21.1(FHCRC)
chr15 44Mb AC090512.3   AQ387477.1 T7,
AQ344466.1*u SP6
15 RP11-315O8 R 15q15~21.1(FHCRC)
chr15 44Mb AC068714.9,
  AZ520626.1 T7,
AQ504675.1 T7,
AQ504671.1 SP6
15 RP11-154J22 CR 15q15~21(FHCRC)
chr15 46Mb AC023355.5,
AA489219 AQ387108.1 SP6,
AQ387111.1 T7
15 RP11-16O9 CR 15q15~21(FHCRC)
chr15 39Mb AC087721.4 AI365420 B75525.1 SP6,
B75526.1 T7
15 RP11-292P13 C 15q15~21(FHCRC)
chr15 42Mb AC018901.8,
15 RP11-296A16 CR 15q15~21(FHCRC)
chr15 41Mb AC018512.6,
15 RP11-88J10 C 15q15~21(FHCRC)
chr15 41Mb   SHGC-1252 AZ516273.1 SP6,
AQ280983.1 SP6,
AZ516276.1 T7,
AQ280986.1 T7
15 RP11-555K11 R 15q15.1b(NCI)
chr15 38Mb   RH25637 AZ301303.2 T7,
AZ301304.2 SP6
15 RP11-526N6 R 15q15.1b~15.1c(NCI)
chr15 39Mb   RH71140 AZ301273.2 T7,
AZ301274.2 SP6
15 RP11-463B11 R 15q15.1c~15.1d(NCI)
chr15 39Mb   RH71140, RH54251 AZ301266.2 SP6,
AZ301265.2 T7,
AQ634911.1*u T7
15 RP11-402F9 R 15q15.2a~15.2b(NCI)
chr15 41Mb AC009852.9,
RH74787 AZ301789.2 T7,
AZ301790.2 SP6
15 RP11-552E10 R 15q21.1a~21.1b(NCI)
chr15 45Mb AC012050.7,
RH79183 AZ301329.2 T7,
AZ301330.2 SP6
15 CTD-2050N2 R 15q21.1(FHCRC)
chr15 45Mb AC023905.6   AQ774192.1 T7,
AQ783527.1 SP6
15 CTD-2120M24 R 15q21.1(FHCRC)
chr15 48Mb AC022403.4,
  AQ667403.1 SP6,
AQ572243.1 T7
15 CTD-2259I7 R 15q21.1(FHCRC)
chr10 67Mb     AQ735634.1 T7,
AQ755005.1 SP6
15 CTD-2556B7 R 15q21.1(FHCRC)
chr15 45Mb AC025167.6   AQ425634.1 ,
AQ392780.1 SP6
15 CTD-3110H11 R 15q21.1(FHCRC)
chr15 48Mb AC022087.8   AQ145494.1 SP6,
AQ140419.1 T7
15 RP11-138P11 R 15q21.1(FHCRC)
chr15 46Mb AC009697.3   AQ384819.1 SP6,
AQ384822.1 T7
15 RP11-142J21 R 15q21.1(FHCRC)
chr15 45Mb AC009558.14   AQ386534.1 SP6,
AQ386546.1 T7
15 RP11-226C3 C 15q21.1(FHCRC)
chr15 42Mb   SHGC-17227    
15 RP11-27P20 R 15q21.1(FHCRC)
chr15 42Mb AC009821.3 SHGC-13414 B87164.1 T7,
B89376.1*u SP6
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
15 RP11-295H24 R 15q21.1(FHCRC)
chr15 47Mb AC022306.6,
15 RP11-348A14 C 15q21.1(FHCRC)
chr15 46Mb AC084758.3   AQ527698.1 T7,
AQ527695.1 SP6
15 RP11-39N23 C 15q21.1(FHCRC)
chr15 49Mb   SHGC-32630    
15 RP11-485O10 R 15q21.1(FHCRC)
chr15 46Mb AC012379.7,
15 RP11-49K3 C 15q21.1(FHCRC)
chr15 48Mb   SHGC-9826 AQ052871.1 SP6  
15 RP11-519G16 R 15q21.1(FHCRC)
chr15 43Mb AC025580.8,
15 RP11-58N19 C 15q21.1(FHCRC)
chr15 43Mb   SHGC-32978 AQ200418.1 ,
15 RP11-6L16 CR 15q21.1(FHCRC)
chr15 44Mb AC068716.8,
SHGC-18125 B49488.1 T7  
15 RP11-81G13 R 15q21.1(FHCRC)
chr15 44Mb AC012405.5   AQ321714.1 T7,
AQ284957.1 SP6
15 RP11-81H5 C 15q21.1(FHCRC)
chr15 44Mb   SHGC-18125 AQ281593.1 SP6,
AZ521587.1 T7,
AQ281596.1 T7
15 RP11-88D20 C 15q21.1(FHCRC)
chr15 43Mb     AQ286656.1 SP6,
AZ516155.1 T7,
AQ286658.1 T7
15 RP11-88F10 C 15q21.1(FHCRC)
chr15 41Mb   SHGC-1252 AZ516182.1 SP6,
AQ286695.1 SP6,
AZ516185.1 T7,
AQ286698.1 T7
15 RP11-89O12 C 15q21.1(FHCRC)
chr15 45Mb   SHGC-3510 AQ283566.1 SP6,
AQ283569.1 T7
15 RP11-90J19 C 15q21.1(FHCRC)
chr15 45Mb AC066615.7, AC091269.1*u   AQ284375.1 SP6,
AZ518545.1 T7,
AQ284377.1 T7
15 RP11-294O11 R 15q21.1(FHCRC)
chr15 48Mb AC009851.6,
RH54318 AZ301781.2 T7,
AZ301782.2 SP6
15 RP11-325E5 R 15q21.1~21.2(FHCRC)
chr15 47Mb AC013452.9,
15 RP11-57J20 C 15q21.1~21.2(FHCRC)
chr15 49Mb AC138905.1*u SHGC-10061, SHGC-34077 AQ194971.1 ,
15 CTB-4N21 R 15q21(CSMC)
chr15 56Mb   D15S198    
15 CTB-5K6 R 15q21(CSMC)
chr15 56Mb   AFMA121ZB9    
15 CTD-2384C14 R 15q21(FHCRC)
chr15 49Mb AC044789.2*u   AQ310132.1 ,
AQ310133.1 SP6
15 RP11-100A21 R 15q21(FHCRC)
chr15 55Mb AC023907.2,
  AQ320208.1 SP6,
AQ320210.1 T7
15 RP11-221H24 C 15q21(FHCRC)
chr15 50Mb   SHGC-33946    
15 RP11-276O16 C 15q21(FHCRC)
chr15 55Mb   SHGC-10025    
15 RP11-291H24 CR 15q21(FHCRC)
chr15 53Mb AC009997.7, AC090746.2*u      
15 RP11-313P18 R 15q21(FHCRC)
chr15 47Mb AC020892.7,
  AQ538048.1*d T7 multiple_placements_on_genome
15 RP11-313P18 R 15q21(FHCRC)
chr15 49Mb AC020892.7*d,
  AQ538048.1 T7 multiple_placements_on_genome
15 RP11-337B11 R 15q21(FHCRC)
chr15 50Mb AC018903.2      
15 RP11-353B9 R 15q21(FHCRC)
chr15 47Mb AC018927.6, AC090766.2*u   AQ533973.1 T7,
AQ533672.1 SP6
15 RP11-416K5 R 15q21(FHCRC)
chr15 48Mb AC009753.5,
  AQ550044.1 T7  
15 RP11-521C20 R 15q21(FHCRC)
chr15 38Mb AC021755.9,
15 RP11-522G20 CR 15q21(FHCRC)
chr15 49Mb AC012169.8, AC087760.1*u      
15 RP11-547D13 C 15q21(FHCRC)
chr15 53Mb AC011912.7,
15 RP11-548M13 C 15q21(FHCRC)
chr15 53Mb AC025272.6      
15 RP11-79C5 C 15q21(FHCRC)
chr15 49Mb     AQ282232.1 SP6,
AZ520683.1 SP6,
AQ282235.1 T7
15 RP11-80G8 R 15q21(FHCRC)
chr15 51Mb AC066614.8, AC090748.2*u SHGC-2205 AZ520808.1 T7,
AQ282268.1 SP6
15 RP11-80N16 C 15q21(FHCRC)
chr15 53Mb     AZ521482.1 T7,
AQ317839.1 SP6,
AQ284193.1*u T7
15 RP11-358M11 CR 15q21~22(FHCRC)
chr15 55Mb AC016525.11   AQ540975.1 SP6,
AQ540976.1 T7
15 RP11-50C13 R 15q21~22(FHCRC)
chr15 56Mb AC018904.6, AC021303.4*u   AQ116353.1 ,
15 RP11-65B16 C 15q21~22(FHCRC)
chr15 66Mb AC067837.6   AQ237326.1 T7,
AQ237323.1 SP6
15 RP11-90A19 C 15q21~22(FHCRC)
chr15 59Mb AC079068.11   AQ281398.1 T7,
AQ281396.1 SP6
15 RP11-99L18 C 15q21~22(FHCRC)
chr15 57Mb AC091748.3 SHGC-311 AQ319243.1 T7,
AQ319241.1 SP6
15 RP11-558D7 R 15q21.1c(NCI)
chr15 46Mb   RH75088 AZ301332.2 SP6,
AZ301331.2 T7
15 CTB-14C23 R 15q21.2(CSMC)
chr15 53Mb   D15S121    
15 CTD-2019H15 R 15q21.2(FHCRC)
chr15 52Mb AC022302.7   AQ772937.1*u SP6  
15 CTD-2647E9 R 15q21.2(FHCRC)
chr15 47Mb AC025040.7   AQ628430.1 SP6  
15 RP11-105D1 R 15q21.2(FHCRC)
chr15 48Mb AC022407.6   AQ318269.1 T7,
AQ318266.1 SP6
15 RP11-23N2 R 15q21.2(FHCRC)
chr15 50Mb AC025917.8,
  AQ013902.1 ,
AQ013904.1 ,
B86521.1*u SP6
15 RP11-316P21 R 15q21.2(FHCRC)
chr15 50Mb AC025041.7   AQ507707.1 SP6  
15 RP11-327C2 R 15q21.2(FHCRC)
chr15 50Mb AC018902.8,
15 RP11-562A8 R 15q21.2(FHCRC)
chr15 48Mb AC012170.6,
15 RP11-66L23 C 15q21.2(FHCRC)
chr15 49Mb   SHGC-34187, SHGC-34077 AQ237369.1 SP6,
AQ237371.1 T7
15 RP11-430B1 R 15q21.2~21.3(FHCRC)
chr15 50Mb AC010674.11,
15 RP11-507J18 R 15q21.2~21.3(FHCRC)
chr15 48Mb AC012100.7, AC090728.2*u      
15 RP11-305H12 R 15q21.2b~21.2c(NCI)
chr15 49Mb   RH54161 AZ301242.2 SP6,
AZ301241.2 T7
15 RP11-315E19 R 15q21.3a~21.3b(NCI)
chr15 52Mb   RH54225 AZ301247.2 T7,
AQ538790.1 SP6,
AZ301248.2 SP6
15 CTD-2025L16 R 15q21.3(FHCRC)
chr15 51Mb AC022303.2   B81373.1 ,
B80930.1 SP6,
AQ828556.1*u SP6
15 CTD-2184D3 R 15q21.3(FHCRC)
chr15 50Mb AC023906.7   AQ030704.1 T7  
15 CTD-2280O8 R 15q21.3(FHCRC)
chr15 56Mb AC022465.5   AQ008486.1 SP6,
15 CTD-2323M6 R 15q21.3(FHCRC)
chr15 55Mb AC025916.5,
  AQ026984.1 SP6,
15 CTD-2330J20 R 15q21.3(FHCRC)
chr15 56Mb AC025431.7   AQ034577.1 SP6,
15 CTD-3247H4 R 15q21.3(FHCRC)
chr15 46Mb AC022467.7,
  AQ223864.1 T7,
AQ220797.1 SP6
15 RP11-100N8 C 15q21.3(FHCRC)
chr15 61Mb   SHGC-13744 AQ311731.1 T7,
AQ345694.1 SP6
15 RP11-139H15 R 15q21.3(FHCRC)
chr15 53Mb AC018926.10, AC091032.1*u   AQ383575.1 SP6,
AQ349303.1*u T7
15 RP11-178D12 R 15q21.3(FHCRC)
chr15 53Mb AC013355.7, AC090745.2*u      
15 RP11-18B17 C 15q21.3(FHCRC)
chr15 58Mb   SHGC-11862    
15 RP11-209K10 R 15q21.3(FHCRC)
chr15 50Mb AC016044.11, AC090862.3*u   AQ420180.1 SP6,
AQ420181.1 T7
15 RP11-213H12 C 15q21.3(FHCRC)
chr15 56Mb   SHGC-7208    
15 RP11-215J7 R 15q21.3(FHCRC)
chr15 52Mb AC009559.8 SHGC-14929    
15 RP11-232J12 R 15q21.3(FHCRC)
chr15 51Mb AC024061.7, AC090931.1*u      
15 RP11-25G4 C 15q21.3(FHCRC)
chr15 53Mb   SHGC-845 B84515.1 SP6  
15 RP11-274F13 R 15q21.3(FHCRC)
chr15 50Mb AC012474.2      
15 RP11-30I7 C 15q21.3(FHCRC)
chr15 54Mb   SHGC-20908 B85180.1 T7  
15 RP11-313H3 R 15q21.3(FHCRC)
chr15 56Mb AC025918.7,
  AQ506292.1 SP6,
AQ528042.1 T7
15 RP11-323F24 R 15q21.3(FHCRC)
chr15 54Mb AC010999.6 RH36930 AQ544228.1 SP6,
AZ301784.2 SP6,
AZ301783.2 T7
15 RP11-355N15 R 15q21.3(FHCRC)
chr15 56Mb AC084781.2   AQ534391.1 SP6  
15 RP11-361D15 C 15q21.3(FHCRC)
chr15 57Mb AC092755.4, AC087523.1*u   AQ542076.1*u SP6,
AQ542078.1*u T7
15 RP11-390M11 R 15q21.3(FHCRC)
chr15 52Mb AC010867.8,
15 RP11-47P5 C 15q21.3(FHCRC)
chr15 52Mb   SHGC-14929 AQ202835.1 ,
15 RP11-521C23 R 15q21.3(FHCRC)
chr15 55Mb AC016971.6,
15 RP11-566D24 R 15q21.3(FHCRC)
chr15 54Mb AC090518.2      
15 RP11-5N19 R 15q21.3(FHCRC)
chr15 54Mb AC084783.2   B49306.1 T7  
15 RP11-61K4 C 15q21.3(FHCRC)
chr15 53Mb AC009799.5 SHGC-10979 AQ194236.1 ,
15 RP11-86K22 R 15q21.3(FHCRC)
chr15 55Mb AC012653.8   AQ283936.1 SP6  
15 RP11-89A6 C 15q21.3(FHCRC)
chr15 54Mb     AQ286122.1 T7,
AQ286121.1 SP6
15 RP11-93I17 R 15q21.3(FHCRC)
chr15 56Mb AC016050.4 SHGC-717 AQ321746.1 SP6  
15 RP11-44G18 R 15q21.3~22.1(FHCRC)
chr15 55Mb AC015579.3   AQ201756.1 ,
15 RP11-203F9 C 15q21.3~22(FHCRC)
chr15 58Mb   SHGC-14783 AQ419241.1 SP6  
15 RP11-30K9 CR 15q21.3~22(FHCRC)
chr15 56Mb AC019299.4,
SHGC-10546 B85205.1 SP6,
B85206.1 T7
15 RP11-460A24 R 15q21.3b~21.3c(NCI)
chr15 53Mb AC016527.2 RH65629 AZ301264.2 SP6,
AZ301263.2 T7
15 CTA-394C7 R 15q22.1(CSMC)
chr15 64Mb   D15S1213    
15 RP11-120O11 C 15q22.1(FHCRC)
chr15 57Mb   SHGC-11890 AQ349761.1 T7,
AQ349760.1 SP6
15 RP11-353J8 R 15q22.1a~22.1b(NCI)
chr15 55Mb   RH54291 AZ301252.2 SP6,
AZ301251.2 T7,
AQ530325.1*u T7
15 CTB-41I12 R 15q22(CSMC)
chr15 62Mb   AFMA349WC5    
15 CTB-53C21 R 15q22(CSMC)
chr15 68Mb   D15S131    
15 CTB-8P11 R 15q22(CSMC)
chr15 70Mb   D15S197    
15 RP11-101C13 C 15q22(FHCRC)
chr15 67Mb   SHGC-3861 AQ311834.1 T7,
AQ346272.1 SP6
15 RP11-107I6 C 15q22(FHCRC)
chr15 62Mb   SHGC-13832 AQ321763.1 T7  
15 RP11-209D15 C 15q22(FHCRC)
chr15 61Mb   SHGC-13744    
15 RP11-349H15 C 15q22(FHCRC)
chr15 63Mb AC068507.2   AQ527731.1 SP6,
AQ527734.1 T7
15 RP11-42F24 C 15q22(FHCRC)
chr15 61Mb   SHGC-2194    
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
15 RP11-50N10 C 15q22(FHCRC)
chr15 62Mb   SHGC-10485 AQ052173.1 ,
15 RP11-537K8 C 15q22(FHCRC)
chr15 62Mb AC017098.2,
AC124793.2, AC090601.3*u
15 RP11-53H4 C 15q22(FHCRC)
chr15 62Mb   SHGC-33583 AQ052969.1  
15 RP11-54P3 C 15q22(FHCRC)
chr15 64Mb   SHGC-2189 AQ115285.1 ,
15 RP11-67N18 C 15q22(FHCRC)
chr15 63Mb AC015714.6 N25550 AZ519018.1 T7,
15 RP11-79J15 C 15q22(FHCRC)
chr15 58Mb     AQ284300.1 SP6,
AQ284303.1 T7
15 RP11-91E13 C 15q22(FHCRC)
chr15 61Mb AC009685.3*u SHGC-13744 AQ281309.1 T7,
AQ281306.1 SP6
15 RP11-100A11 C 15q22~23(FHCRC)
chr15 64Mb AC090461.4 AA007518 AQ320176.1 T7,
AQ320174.1 SP6
15 RP11-34F13 C 15q22~23(FHCRC)
chr15 65Mb AC009292.11 SHGC-34905, AA250966 AQ046404.1  
15 RP11-13J23 C 15q22.2(FHCRC)
chr15 58Mb   SHGC-34398 B83398.1 SP6  
15 RP11-306H6 R 15q22.2a~22.2b(NCI)
chr15 57Mb   RH54362*u AZ301280.2 SP6,
AZ301279.2 T7
15 RP11-30M4 C 15q22.2(FHCRC)
chr15 63Mb   SHGC-14524    
15 RP11-344A16 R 15q22.2(FHCRC)
chr15 55Mb AC090651.3 RH54291 AQ540343.1 T7,
AQ540341.1 SP6
15 RP11-69G7 C 15q22.2(FHCRC)
chr15 61Mb AC087612.6 AA490777 AQ267625.1 T7,
AQ267623.1 SP6
15 RP11-74K1 C 15q22.2(FHCRC)
chr15 58Mb   SHGC-34807 AQ268496.1 SP6  
15 RP11-448B5 R 15q22.31b(NCI)
chr15 64Mb   RH44449 AZ301321.2 T7,
AZ301322.2 SP6
15 CTD-2022G15 R 15q23(UCSF)
chr15 72Mb     B65591.1 ,
AQ269505.1 T7,
B65592.1 SP6,
AQ227590.1 SP6
15 CTD-2024G1 R 15q23(UCSF)
chr15 76Mb     AQ229401.1 T7  
15 RP11-106M3 C 15q23(FHCRC)
chr15 70Mb AC009690.17 SHGC-34981 AQ315234.1 SP6  
15 RP11-207J8 C 15q23(FHCRC)
chr15 65Mb   SHGC-34905 AQ417725.1 T7,
AQ417722.1 SP6
15 RP11-221P9 C 15q23(FHCRC)
chr15 66Mb   SHGC-14096, 77169*u, AFM317TC9*u, 62982*u    
15 RP11-28D6 C 15q23(FHCRC)
chr15 67Mb   SHGC-10795 B84795.1 T7  
15 RP11-29N12 C 15q23(FHCRC)
chr15 69Mb AC016385.4*u   AQ003170.1 SP6,
B87626.1 T7
15 RP11-2I17 C 15q23(FHCRC)
chr15 70Mb AC020779.10 SHGC-2187 B48560.1 SP6,
B48561.1 T7
15 RP11-33B6 C 15q23(FHCRC)
chr15 70Mb   SHGC-36787 AQ044950.1  
15 RP11-368G21 C 15q23(FHCRC)
chr15 67Mb AC018949.4*u   AQ543720.1 T7,
AQ543719.1 SP6
15 RP11-424J10 C 15q23(FHCRC)
chr15 71Mb AC009660.15      
15 RP11-492D5 C 15q23(FHCRC)
chr15 71Mb AC022889.8 AA447658    
15 RP11-60L3 C 15q23(FHCRC)
chr15 72Mb AC023300.19      
15 RP11-64K10 C 15q23(FHCRC)
chr15 68Mb AC010076.5,
SHGC-13439 AQ237001.1 SP6,
AQ237002.1 T7
15 RP11-70A7 C 15q23(FHCRC)
chr15 64Mb   SHGC-2209 AQ238922.1 SP6,
AZ519631.1 T7
15 RP11-79O6 C 15q23(FHCRC)
chr15 68Mb     AQ283301.1 T7,
AQ283299.1*u SP6
15 RP11-85E15 C 15q23(FHCRC)
chr15 65Mb   SHGC-3228 AQ281911.1 T7  
15 RP11-89L11 C 15q23(FHCRC)
chr13 71Mb     AQ284825.1 SP6,
AQ284828.1 T7
15 RP11-89L21 C 15q23(FHCRC)
chr15 69Mb     AQ284863.1 T7,
AQ284860.1 SP6
15 RP11-91O13 C 15q23(FHCRC)
chr15 0Mb     AZ518715.1 T7,
AQ282543.1 T7,
AQ282541.1*d SP6
15 RP11-91O13 C 15q23(FHCRC)
chr15 80Mb     AQ282543.1 T7,
AQ282541.1 SP6,
AZ518715.1*d T7
15 RP11-46C10 C 15q23~24(FHCRC)
chr15 72Mb   SHGC-2195 AQ199870.1*u  
15 RP11-500O23 R 15q24.1a~24.1b(NCI)
chr15 70Mb   RH47216, RH26696 AZ301222.2 SP6,
AZ301221.2 T7
15 CTB-10N4 R 15q24(CSMC)
chr15 70Mb   D15S124    
15 CTB-53L8 R 15q24(CSMC)
chr15 82Mb   D15S205    
15 RP11-72A16 C 15q24(FHCRC)
chr15 39Mb   SHGC-11895    
15 RP11-79J21 C 15q24(FHCRC)
chr15 74Mb AC024059.2,
  AQ284316.1 T7,
AQ284315.1 SP6
15 RP11-10K12 C 15q24~25(FHCRC)
chr15 76Mb   SHGC-12481 B72912.1 T7,
B72911.1 SP6
15 RP11-239O2 C 15q24~25(FHCRC)
chr15 39Mb   SHGC-11895    
15 RP11-762M18 C 15q24~25(FHCRC)
chr15 74Mb AC066607.2,
15 RP11-91J9 C 15q24~25(FHCRC)
chr15 75Mb AC104567.1*u   AQ283536.1 T7,
AQ283533.1 SP6
15 RP11-91M4 C 15q24~25(FHCRC)
chr15 77Mb     AQ282685.1 T7,
AQ282682.1 SP6
15 RP11-289H7 R 15q24.2a(NCI)
chr15 74Mb   RH17222 AZ301213.2 T7,
AZ301214.2 SP6
15 RP11-338C8 R 15q24.3a(NCI)
chr15 75Mb   RH39460*u AZ301215.2 T7,
AZ301216.2 SP6
15 RP11-558F16 R 15q25.1a~25.1b(NCI)
chr15 79Mb   RH69578 AZ301230.2 SP6,
AZ301229.2 T7
15 CTB-19N10 R 15q25(CSMC)
chr15 84Mb   D15S201    
15 CTB-45C17 R 15q25(CSMC)
chr15 79Mb   AFMA031XF5    
15 CTD-2110H9 R 15q25(UCSF)
chr15 81Mb     AQ567271.1 T7,
AQ624583.1*u SP6
15 RP11-116L7 C 15q25(FHCRC)
chr15 83Mb   SHGC-5341 AQ345509.1 SP6,
AQ345511.1 T7
15 RP11-119O22 C 15q25(FHCRC)
chr15 78Mb AC012337.8 R07897 AQ351088.1 T7,
AQ351086.1 SP6
15 RP11-131K19 C 15q25(FHCRC)
chr15 85Mb   SHGC-20927    
15 RP11-152F13 C 15q25(FHCRC)
chr15 80Mb AC010724.6   AQ384499.1 SP6,
AQ384500.1 T7
15 RP11-282P15 C 15q25(FHCRC)
chr15 77Mb AC010672.6,
  AQ505812.1 T7  
15 RP11-285A1 C 15q25(FHCRC)
chr15 76Mb AC015557.6,
15 RP11-429B14 C 15q25(FHCRC)
chr15 87Mb AC013391.12      
15 RP11-43K17 C 15q25(FHCRC)
chr15 83Mb   SHGC-35120 AQ195467.1  
15 RP11-535P8 C 15q25(FHCRC)
chr15 83Mb AC023140.4,
15 RP11-565O12 C 15q25(FHCRC)
chr15 82Mb AC016771.5,
15 RP11-58C20 C 15q25(FHCRC)
chr15 82Mb   SHGC-30592 AQ202456.1 ,
15 RP11-60J21 C 15q25(FHCRC)
chr15 78Mb   SHGC-17611 AQ202295.1 ,
15 RP11-60P2 C 15q25(FHCRC)
chr15 85Mb AC105120.1 SHGC-2186 AQ199900.1 ,
15 RP11-68P22 15q25(FHCRC)
chr15 82Mb   SHGC-9771 AQ241268.1 SP6,
AQ241270.1 T7
15 RP11-7P8 C 15q25(FHCRC)
chr15 77Mb   SHGC-11766    
15 RP11-81A1 C 15q25(FHCRC)
chr15 77Mb AC015871.7 SHGC-35552 AQ319872.1 T7,
AQ284225.1 SP6
15 RP11-81L17 C 15q25(FHCRC)
chr15 82Mb AC015715.4 SHGC-30592 AZ516047.1 T7,
AQ281859.1 T7,
AQ281857.1 SP6,
AZ516045.1 SP6
15 RP11-90B9 C 15q25(FHCRC)
chr15 81Mb AC022558.9, AC022175.1*u   AZ517977.1 T7,
AQ283519.1 T7,
AQ283516.1 SP6
15 RP11-91E10 C 15q25(FHCRC)
chr15 86Mb     AQ284426.1 T7,
AQ284423.1 SP6
15 RP11-91F21 C 15q25(FHCRC)
chr15 80Mb     AZ519296.1 T7,
AQ283359.1 T7,
AQ283356.1*u SP6
15 RP11-528N4 C 15q25~26.1(FHCRC)
chr15 88Mb AC013281.5,
15 RP11-80J8 C 15q25~26.1(FHCRC)
chr15 85Mb AC105122.1*u   AQ317761.1 SP6,
AQ284116.1 T7
15 RP11-285I14 C 15q25~26(FHCRC)
chr15 86Mb AC011966.7      
15 RP11-559G12 R 15q25.2a~25.2b(NCI)
chr15 80Mb   RH54250 AZ301275.2 T7,
AZ301276.2*u SP6
15 RP11-402J23 R 15q25.2b(NCI)
chr15 82Mb   RH54081 AZ301219.2 T7,
AZ301220.2 SP6
15 RP11-296P8 R 15q25.3a(NCI)
chr15 83Mb   RH54181 AZ301212.2 SP6,
AZ301211.2 T7
15 RP11-533L13 R 15q26.1a(NCI)
chr15 86Mb   RH39486, RH44907 AZ301223.2 T7,
AZ301224.2 SP6
15 RP11-538D2 R 15q26.1a(NCI)
chr15 86Mb   RH44907 AZ301225.2 T7,
AZ301226.2 SP6
15 CTB-55D8 R 15q26.1(CSMC)
chr15 79Mb   D15S206, D15S115    
15 CTB-9O7 R 15q26.1(CSMC)
chr15 79Mb   D15S206    
15 CTD-2272E1 C 15q26.1(FHCRC)
chr15 89Mb     AQ745726.1 T7  
15 RP11-345O16 C 15q26.1(FHCRC)
chr15 89Mb AC012198.3*u   AQ539369.1 SP6,
AQ539370.1 T7
15 RP11-79A7 C 15q26.1(FHCRC)
chr15 90Mb AC116167.2*u   AQ282177.1 T7,
AZ520662.1 SP6,
AQ282175.1 SP6
15 RP11-91B15 15q26.1(FHCRC)
chr15 88Mb     AZ518762.1 T7  
15 CTB-60B21 R 15q26(CSMC)
chr15 87Mb   D15S116    
15 RP11-277L10 C 15q26(FHCRC)
chr15 99Mb     AQ505599.1 SP6,
AQ505600.1 T7
15 RP11-79C10 C 15q26(FHCRC)
chr15 94Mb     AQ282449.1 SP6,
AZ519147.1 SP6,
AQ581274.1 SP6,
AQ581275.1 T7,
AQ282452.1 T7
15 RP11-360F18 R 15q26.1b(NCI)
chr15 88Mb   RH54255 AZ301289.2 T7,
AZ301290.2 SP6,
AZ519600.1 SP6
15 RP11-378B5 R 15q26.1c(NCI)
chr15 89Mb   RH39554 AZ301319.2 T7,
AQ534334.1 SP6,
AZ301320.2 SP6
15 RP11-304N14 R 15q26.1d(NCI)
chr15 90Mb AC020563.8,
RH47406 AZ301309.2 T7,
15 RP11-369O17 R 15q26.1e(NCI)
chr15 91Mb   RH26599 AZ301318.2 SP6,
AZ301317.2 T7
15 RP11-337N12 R 15q26.2a~26.2b(NCI)
chr15 94Mb   RH45711 AZ301950.2 SP6,
AZ301949.2 T7
15 RP11-120N1 C 15q26.2(FHCRC)
chr15 95Mb   SHGC-2208 AQ341084.1 T7,
AQ341081.1*u SP6
15 RP11-185D5 C 15q26.2(FHCRC)
chr15 92Mb   SHGC-14718 AQ419529.1 T7  
15 RP11-405A15 C 15q26.2(FHCRC)
chr15 89Mb AC067986.24 RH54255    
15 RP11-57P19 C 15q26.2(FHCRC)
chr15 92Mb AC009432.7 SHGC-15361 AQ116082.1 ,
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
15 RP11-66B24 C 15q26.2(FHCRC)
chr15 99Mb AC015712.10 AA455235 AQ196025.1  
15 RP11-654A16 C 15q26.2~26.3(FHCRC)
chr15 97Mb AC069029.9      
15 RP11-80F4 C 15q26.2~26.3(FHCRC)
chr15 96Mb   SHGC-34997 AQ284000.1 T7,
AQ283999.1 SP6
15 RP11-90E5 C 15q26.2~26.3(FHCRC)
chr15 98Mb AC022710.10   AQ281493.1 SP6,
AQ281496.1 T7
15 RP11-9B21 C 15q26.2~26.3(FHCRC)
chr15 96Mb   SHGC-34997 B72496.1 T7  
15 RP11-308P12 R 15q26.2c(NCI)
chr15 96Mb   RH47884 AZ301245.2 T7,
AZ301246.2 SP6
15 RP11-397C10 R 15q26.3a(NCI)
chr15 97Mb   RH70207 AZ301293.2 T7,
AZ301294.2 SP6
15 RP11-530H6 R 15q26.3d(NCI)
chr15 99Mb   RH44112 AZ301328.2 SP6,
AZ301327.2 T7
total303C:157 R:151 S:1303303 155164218 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.