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Cytogenetic Resource of FISH-mapped, Sequence-tagged Clones

FISH chr: FISH data source:
Clone distributor:
Sequence tag: Show details on sequence-tag:
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Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
13 RP11-420H1 C 13q11(FHCRC)
chr13 24Mb AC018739.4   AQ549908.1 SP6,
AQ549911.1 T7
13 RP11-124N19 S 13q11~12.2(SC)
chr13 22Mb AL157931.17   AQ344140.1 T7,
AQ344137.1 SP6
13 RP11-347L8 S 13q11~12.2(SC)
chr13 21Mb AL137250.17   AQ543000.1 SP6,
AQ543002.1 T7
13 RP11-61K9 S 13q11~12.2(SC)
chr13 19Mb AL355001.20   AQ200713.1 ,
AQ237401.1 SP6
13 RP11-111G7 S 13q11~12.3(SC)
chr13 25Mb AL136438.10   AQ321249.1 T7,
AQ321247.1 SP6
13 RP11-144H23 RS 13q11~12.3(SC)
chr13 26Mb AL158062.22 SHGC-6462 CL423297.1 T7,
AQ389551.1 T7,
CL423291.1 SP6
13 RP11-18F22 C 13q12.1(FHCRC)
chr13 24Mb   SHGC-3690 B82870.1 T7  
13 RP11-204D11 C 13q12.1(FHCRC)
chr13 24Mb   SHGC-7158 AQ417654.1 SP6,
AQ417657.1 T7
13 RP11-89D16 C 13q12.1(FHCRC)
chr13 20Mb     AQ285759.1 T7,
AQ285757.1*u SP6
13 RP11-8C15 C 13q12.1(FHCRC)
chr13 20Mb   SHGC-37580 B72296.1 SP6  
13 CTD-2052F6 C 13q12(FHCRC)
chr13 25Mb     AQ231422.1 SP6,
AQ234491.1 T7
13 RP11-110K18 S 13q12.1~12.3(SC)
chr13 19Mb AL137119.26   AQ350185.1 SP6,
AQ323952.1 T7
13 RP11-110K8 C 13q12(FHCRC)
chr13 20Mb AL138680.15 SHGC-37580 AQ323940.1 T7,
AQ350181.1 SP6
13 RP11-165I9 S 13q12.11~12.3(SC)
chr13 24Mb AL359757.21   AQ414468.1 T7  
13 RP11-300N13 S 13q12.11~12.3(SC)
chr13 23Mb AL136963.17   AQ509066.1 SP6,
AQ509069.1 T7
13 RP11-316G23 S 13q12.1~12.3(SC)
chr13 21Mb AL137248.21   AQ506132.1 SP6,
AQ506135.1 T7
13 RP11-31H2 C 13q12(FHCRC)
chr13 23Mb AL157364.15 SHGC-12920 AQ046180.1  
13 RP11-35M5 C 13q12(FHCRC)
chr13 27Mb   SHGC-9475 AQ046528.1 ,
13 RP11-520L19 RS 13q12.11~12.3(SC)
chr13 23Mb AL157368.7   CL423260.1 SP6,
CL423264.1 T7
13 RP11-79G11 13q12(FHCRC)
chr13 23Mb     AQ283476.1 T7,
AQ283472.1 SP6,
AZ519036.1*u SP6
13 RP11-7G2 C 13q12(FHCRC)
chr13 26Mb   SHGC-6462 B71295.1 T7  
13 RP11-80J14 C 13q12(FHCRC)
chr13 24Mb AC016688.5 SHGC-12920, SHGC-7158 AQ317764.1 SP6,
AQ284125.1 T7
13 RP11-88J11 C 13q12(FHCRC)
chr13 25Mb AL159159.21 R59697 AQ285988.1 T7  
13 RP11-89P22 C 13q12(FHCRC)
chr13 27Mb   SHGC-9475 AQ286774.1 T7,
AQ286771.1*u SP6
13 RP11-91C24 C 13q12(FHCRC)
chr13 26Mb     AQ318743.1 SP6,
AQ318744.1 T7
13 RP11-91N5 C 13q12(FHCRC)
chr13 29Mb     AQ284187.1 SP6,
AZ519350.1 T7,
AQ284199.1 T7
13 RP11-94A1 C 13q12(FHCRC)
chr13 18Mb AC015873.4   AQ312937.1 T7  
13 RP11-125I23 C 13q12~13(FHCRC)
chr13 26Mb AL137059.20 RH53406 AQ346779.1 T7,
AQ346776.1 SP6
13 RP11-90M5 CS 13q12.11~12.3(SC)
chr13 29Mb AL139188.14   AQ283729.1 SP6,
AQ283733.1 T7
13 RP11-88F2 C 13q12.2(FHCRC)
chr13 22Mb     AQ286677.1 SP6,
AZ516165.1 T7,
AQ286680.1 T7
13 RP11-89J10 C 13q12.2(FHCRC)
chr13 26Mb AL354799.12   AQ286551.1 T7,
AQ286545.1*u SP6
13 RP11-90M15 C 13q12.2(FHCRC)
chr13 24Mb     AQ284383.1 SP6,
AQ284386.1 T7
13 RP11-87G1 RS 13q12.2~13.2(SC)
chr13 32Mb AL139383.14   AQ284066.1 T7  
13 RP11-173P16 S 13q12.2~13.3(SC)
chr13 30Mb AL137142.20   AQ417555.1 T7,
AQ417552.1 SP6
13 RP11-367C11 RS 13q12.2~13.3(SC)
chr13 30Mb AL138965.10   AQ547931.1 T7,
CL423329.1 T7,
CL423324.1 SP6
13 CTD-2037D17 C 13q12.3(FHCRC)
chr13 31Mb     AQ229970.1 SP6,
AQ245563.1 T7
13 RP11-14O22 RS 13q12.3~13.3(SC)
chr13 36Mb AL136220.14   B76332.1 T7  
13 RP11-16L6 S 13q12.3~13.3(SC)
chr13 36Mb AL136160.18   B85406.1 SP6,
B81754.1 T7
13 RP11-63C16 C 13q12.3~13(FHCRC)
chr13 30Mb   SHGC-11972, SHGC-2180 AQ201876.1  
13 RP11-64C21 C 13q12.3~13(FHCRC)
chr13 30Mb   SHGC-2180 AQ238650.1 SP6  
13 RP11-89L15 CRS 13q12.3~14.12(SC)
chr13 39Mb AL133318.11 D13S1162 AQ284837.1 SP6,
AQ284840.1 T7
13 RP11-117I13 S 13q12.3~14.13(SC)
chr13 42Mb AL137138.13   AQ347975.1 SP6,
AQ347978.1 T7
13 RP11-141M1 S 13q12.3~14.13(SC)
chr13 32Mb AL138999.13   AQ385233.1 SP6,
AQ385245.1 T7
13 RP11-186J16 S 13q12.3~14.13(SC)
chr13 38Mb AL138685.21   AQ413408.1 T7  
13 RP11-121O19 RS 13q12.3~14.3(SC)
chr13 29Mb AL138681.17 SHGC-11972, SHGC-2180 AQ343487.1 SP6,
AQ343491.1 T7
13 CTD-2010P19 R 13q13(UCSF)
chr13 31Mb     B57925.1 SP6,
B57924.1 ,
AQ223107.1 T7,
AQ223296.1*u SP6
13 RP11-11K16 C 13q13(FHCRC)
chr13 31Mb AL353665.13   B75605.1 T7,
B73167.1 SP6
13 RP11-179A7 C 13q13(FHCRC)
chr13 33Mb AL139081.21   AQ414539.1 SP6,
AQ414542.1 T7
13 RP11-197L7 S 13q13.1~13.3(SC)
chr13 36Mb AL159973.16   AQ416746.1*d SP6,
AQ416748.1*d T7
13 RP11-197L7 S 13q13.1~13.3(SC)
chr3 178Mb AL159973.16*d   AQ416748.1 T7,
AQ416746.1 SP6
13 RP11-269G10 S 13q13.1~13.3(SC)
chr13 33Mb AL138961.17   AZ521806.1 SP6,
AQ478888.1 T7
13 RP11-37E23 C 13q13(FHCRC)
chr13 31Mb AL445212.9   AQ029747.1  
13 RP11-53F19 C 13q13(FHCRC)
chr13 39Mb   D13S1162 AQ053097.1 ,
13 RP11-81F11 C 13q13(FHCRC)
chr13 32Mb AL139187.19   AZ521562.1 SP6,
AQ281097.1 SP6,
AZ521564.1 T7,
AQ281098.1 T7
13 RP11-90F5 C 13q13(FHCRC)
chr13 34Mb     AZ518427.1 T7,
AQ283661.1 T7,
AQ283659.1 SP6
13 RP11-91K18 C 13q13(FHCRC)
chr13 35Mb     AQ282655.1 T7,
AQ282652.1 SP6
13 RP11-97E23 C 13q13(FHCRC)
chr13 28Mb AL359454.7   AQ316760.1 SP6  
13 RP11-14A4 C 13q13~14.1(FHCRC)
chr13 39Mb   SHGC-34363 B81624.1 SP6  
13 RP11-88N4 C 13q13~14.1(FHCRC)
chr13 40Mb   SHGC-16596 AQ281528.1 SP6,
AZ516863.1 SP6,
AZ516866.1 T7,
AQ281531.1 T7
13 RP11-9F13 C 13q13~14.1(FHCRC)
chr13 40Mb   SHGC-35896 B72536.1 T7,
B72535.1*u SP6
13 RP11-429E17 RS 13q13.1~14.2(SC)
chr13 38Mb AL158194.16   AQ550295.1 SP6,
AQ550297.1 T7
13 RP11-17I11 C 13q13~14(FHCRC)
chr13 42Mb AC016270.4 SHGC-6450 B82714.1 T7,
B82713.1 SP6
13 RP11-98D3 R 13q13.3a(NCI)
chr13 34Mb AL390071.9   AQ320547.1 SP6,
AQ320551.1*u T7
13 RP11-160G19 S 13q13.3~14.2(SC)
chr13 42Mb AL136959.9   AQ374904.1 SP6,
AQ374907.1 T7
13 RP11-71C5 S 13q13.3~14.2(SC)
chr13 43Mb AL139184.8   AQ238659.1 T7,
AQ267004.1 SP6
13 RP11-94N9 S 13q13.3~14.3(SC)
chr13 46Mb AL354814.19   AQ281751.1 SP6,
AQ315991.1 T7
13 RP11-96M12 S 13q13.3~14.3(SC)
chr13 44Mb AL136966.27   AQ313577.1 T7,
AQ313576.1 SP6
13 RP11-139H14 C 13q14.1~14.2(FHCRC)
chr13 45Mb AL137141.10   AQ384250.1 T7  
13 RP11-13I8 C 13q14(FHCRC)
chr13 41Mb   SHGC-11502 B82219.1 SP6,
B75128.1 T7
13 RP11-165D7 C 13q14(FHCRC)
chr13 47Mb AL157813.11 AA495766 AQ382284.1 T7,
AQ415289.1 SP6
13 RP11-20K19 C 13q14(FHCRC)
chr13 44Mb   SHGC-11937, SHGC-194 AQ008123.1 SP6,
B83071.1 SP6,
B85704.1*u T7
13 RP11-21H9 CR 13q14(FHCRC)
chr13 41Mb AC023297.3 SHGC-4151 B83994.1 T7,
B83993.1 SP6
13 RP11-278A16 RS 13q14.1~14.3(SC)
chr13 48Mb AL139182.24   AQ506199.1 T7,
AQ506198.1 SP6
13 RP11-30N18 C 13q14(FHCRC)
chr13 44Mb   SHGC-8160 B87908.1 T7  
13 RP11-54G17 C 13q14(FHCRC)
chr13 48Mb   SHGC-902 AQ082004.1  
13 RP11-34F20 C 13q14~21(FHCRC)
chr13 49Mb AL137060.13 AA425755 AQ045609.1 ,
AZ516651.1 T7
13 RP11-432M24 C 13q14~21(FHCRC)
chr13 49Mb AL135901.23   AQ551213.1 T7  
13 RP11-90K7 C 13q14~21(FHCRC)
chr13 48Mb     AQ283481.1 SP6,
AQ283484.1 T7
13 RP11-484D5 R 13q14.11e(NCI)
chr13 43Mb AL356107.21   AQ630687.1 SP6,
AQ630689.1 T7
13 RP11-108P5 S 13q14.12~21.1(SC)
chr13 48Mb AL137118.20   AQ348814.1 SP6  
13 RP11-417C20 R 13q14.12b~14.13b(NCI)
chr13 46Mb AL138704.12   AQ553703.1 T7  
13 CTD-2202J2 C 13q14.2(UCSF)
chr13 39Mb     AQ151331.1 SP6,
AQ210489.1*u T7
13 RP11-120G8 C 13q14.2(FHCRC)
chr13 47Mb   SHGC-16168 AQ350340.1 SP6,
AQ350341.1 T7
13 RP11-58C16 C 13q14.2(FHCRC)
chr13 50Mb AL159157.3*u SHGC-33510 AQ202447.1  
13 CTD-2173J2 C 13q14.2~14.3(FHCRC)
chr13 47Mb     B94340.1 ,
B94349.1 SP6
13 RP11-24B19 S 13q14.2~14.3(SC)
chr13 50Mb AL137780.10   AQ013342.1 ,
B86558.1 T7
13 RP11-91H15 C 13q14.2~14.3(FHCRC)
        AZ519317.1*u T7  
13 RP11-103K9 S 13q14.2~21.1(SC)
chr13 52Mb AL136523.20   AQ323818.1 T7,
AQ323817.1 SP6
13 RP11-185C18 S 13q14.2~21.1(SC)
chr13 48Mb AL139321.28   AQ418216.1 T7,
AQ418212.1 SP6
13 RP11-457D13 S 13q14.2~21.1(SC)
chr13 50Mb AL157817.13   AQ581218.1 SP6,
AQ581221.1 T7
13 RP11-64P12 S 13q14.2~21.2(SC)
chr13 51Mb AL158066.12 SHGC-20819*u AQ237110.1 T7,
AQ237109.1 SP6
13 RP11-16F6 C 13q14.3(FHCRC)
chr13 52Mb AC012239.3 SHGC-20819 B81737.1 SP6,
B82497.1*u T7
13 RP11-52B21 C 13q14.3(FHCRC)
chr13 46Mb   SHGC-3572 AQ115706.1 ,
13 RP11-248G5 S 13q14.3~21.1(SC)
chr13 51Mb AL139082.18   AQ491293.1 T7,
AZ516588.1 SP6
13 RP11-80H2 C 13q14.3~21.1(FHCRC)
chr13 49Mb     AQ284046.1 SP6,
AQ284051.1 T7
13 RP11-91J7 C 13q14.3~21.1(FHCRC)
chr13 52Mb     AZ519331.1 T7,
AQ283530.1 T7,
AQ283527.1 SP6
13 RP11-93H24 C 13q14.3~21.1(FHCRC)
chr13 52Mb AL139089.13 SHGC-31236*u AQ312163.1 SP6,
AQ312594.1 T7
13 RP11-100C24 RS 13q14.3~21.2(SC)
chr13 56Mb AL353657.26   AQ322007.1 SP6,
AQ322009.1 T7
13 RP11-245D16 S 13q14.3~21.2(SC)
chr13 51Mb AL359513.12   AQ488402.1 T7  
13 RP11-59A15 S 13q14.3~21.2(SC)
chr13 53Mb AL354998.15   AQ194628.1*u  
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
13 RP11-142D16 S 13q14.3~21.31(SC)
chr13 58Mb AL157362.10   AQ387298.1 SP6  
13 RP11-98F3 S 13q14.3~21.31(SC)
chr13 57Mb AL157772.10   AQ321682.1 SP6,
AQ321685.1*u T7
13 RP11-48H1 R 13q14.3c(NCI)
chr13 49Mb AL158195.11   AQ199561.1 ,
CL423295.1 SP6,
CL423296.1 T7,
13 RP11-431O22 C 13q21.1(FHCRC)
chr13 52Mb AL139085.13 RH53180 AQ547429.1 SP6,
AZ916640.1 SP6,
AQ547431.1 T7,
AZ916639.1 T7
13 RP11-81D19 C 13q21.1(FHCRC)
chr13 57Mb     AZ521542.1 SP6,
AQ281065.1 SP6,
AZ521544.1 T7,
AQ281066.1 T7
13 CTD-2206K15 R 13q21(UCSF)
        AQ299107.1*u T7  
13 RP11-138D23 S 13q21.1~21.33(SC)
chr13 66Mb AL138682.13   AQ384403.1 T7,
AQ384401.1 SP6
13 RP11-14B2 S 13q21.1~21.3(SC)
chr13 71Mb AL157812.5   B81627.1 T7,
AZ521185.1 SP6
13 RP11-204N9 C 13q21(FHCRC)
chr13 57Mb AL445216.6   AQ418632.1 T7,
AQ418630.1*u SP6
13 RP11-326B4 RS 13q21.1~21.33(SC)
chr13 66Mb AL139325.13   CL423271.1 T7,
CL423266.1 SP6,
AQ544235.1 SP6
13 RP11-79D3 C 13q21(FHCRC)
chr13 62Mb     AQ284064.1 T7  
13 RP11-91F3 C 13q21(FHCRC)
chr13 62Mb     AQ283319.1 T7,
AQ283316.1 SP6
13 RP11-100I7 S 13q21.1~22.1(SC)
chr13 67Mb AL357043.9   AQ320620.1 T7,
AQ320617.1 SP6
13 RP11-9P22 C 13q21~22(FHCRC)
chr13 73Mb AC011050.4*u SHGC-2167 B72677.1 SP6,
B72678.1 T7
13 RP11-14O16 R 13q21.1d(NCI)
chr13 56Mb AC018395.4   B82359.1 SP6,
B87995.1 T7,
B76327.1 T7
13 RP11-16M6 R 13q21.2a(NCI)
chr13 58Mb AC024276.2   B75508.1 SP6,
B75509.1 T7
13 RP11-23B16 RS 13q21.2~22.1(SC)
chr13 67Mb AL161894.12   AQ013276.1 ,
CL423303.1 T7,
CL423298.1 SP6,
13 RP11-248N6 S 13q21.2~22.1(SC)
chr13 67Mb AL353580.7   AQ484755.1 T7,
AQ484752.1*u SP6
13 RP11-282D7 RS 13q21.2~22.1(SC)
chr13 62Mb AL355609.9   AZ519615.1 SP6,
AQ505208.1 T7
13 RP11-430I3 R 13q21.2b(NCI)
chr13 59Mb AL356502.21 RH44715 AZ916637.1 T7,
AQ552415.1 T7,
AQ552413.1 SP6,
AZ916638.1 SP6
13 RP11-11C5 C 13q21.3(FHCRC)
chr13 72Mb AL356754.18 SHGC-14953 B71838.1 SP6,
B71839.1 T7
13 RP11-205C23 C 13q21.3(FHCRC)
chr13 72Mb   SHGC-8155 AQ419216.1 T7  
13 RP11-37I8 C 13q21.3(FHCRC)
chr13 64Mb   SHGC-20821 AQ029890.1 SP6  
13 RP11-451E2 C 13q21.3(FHCRC)
chr13 71Mb     AQ583130.1 SP6,
AQ583134.1 T7
13 RP11-451O10 C 13q21.3(FHCRC)
chr13 69Mb     AQ584130.1 SP6,
AQ584134.1 T7
13 RP11-81D9 C 13q21.3(FHCRC)
chr13 72Mb     AQ281029.1 SP6,
AZ521530.1 T7,
AQ281031.1 T7
13 RP11-165L1 RS 13q21.31~22.2(SC)
chr13 72Mb AL139181.6 SHGC-8155, SHGC-665 AQ415440.1 SP6,
AQ382553.1 T7
13 RP11-1G3 S 13q21.31~22.2(SC)
chr13 70Mb AL139001.14, AC015453.2*u   B48369.1 T7,
AQ312674.1 SP6
13 RP11-30C8 S 13q21.31~22.2(SC)
chr13 72Mb AL138964.11 SHGC-9424 B85105.1 SP6  
13 RP11-122N18 C 13q21.3~22(FHCRC)
chr13 77Mb   SHGC-12417 AQ345069.1 SP6,
AZ520312.1 T7
13 RP11-46L3 C 13q21.3~22(FHCRC)
chr13 73Mb   SHGC-3408 AQ195363.1 ,
13 RP11-79I4 C 13q21.3~22(FHCRC)
chr13 73Mb   SHGC-4027 AQ283096.1 T7,
AQ629635.1 T7,
AZ519175.1 SP6,
AQ283095.1 SP6,
AQ581403.1 SP6
13 RP11-138N13 S 13q21.33~22.3(SC)
chr13 74Mb AL139375.18   AQ384782.1 T7  
13 RP11-417I19 S 13q21.33~31.1(SC)
chr13 83Mb AL162494.10   AQ552729.1 T7  
13 RP11-137M6 CS 13q21.33~22.3(SC)
chr13 76Mb AL137140.12 SHGC-6449 AQ381060.1 SP6,
AQ348407.1 T7
13 RP11-19D22 S 13q22.1~22.3(SC)
chr13 75Mb AL136441.16   B82966.1 T7,
B82965.1 SP6
13 RP11-285E18 RS 13q22.1~22.3(SC)
chr13 73Mb AL157814.14   CL423194.1 SP6,
CL423199.1 T7
13 RP11-43P9 C 13q22(FHCRC)
chr13 75Mb   SHGC-30014 AQ202945.1 ,
13 RP11-94F7 C 13q22(FHCRC)
chr13 72Mb   SHGC-8155, SHGC-665 AQ315807.1 T7,
AQ282121.1 SP6
13 RP11-29G8 RS 13q22.1~31.1(SC)
chr13 75Mb AL137782.9   B85013.1 SP6,
B85014.1 T7
13 RP11-30E17 S 13q22.1~31.1(SC)
chr13 78Mb AL139006.13   B87742.1 T7,
B87741.1 SP6
13 RP11-318G21 CS 13q22.2~31.1(SC)
chr13 77Mb AL139002.18   AQ535765.1 SP6  
13 RP11-600P1 CS 13q22.1~31.1(SC)
chr13 78Mb AL354869.11   AQ340919.1*u T7  
13 RP11-753M10 S 13q22.3~31.1(SC)
chr13 86Mb AL355003.10   AQ619007.1 T7  
13 RP11-134J6 S 13q22.3~31.3(SC)
chr13 80Mb AL136121.12   AQ389067.1 SP6,
AQ389068.1 T7
13 RP11-25J23 S 13q22.3~31.3(SC)
chr13 78Mb AL136442.12   AQ013632.1  
13 RP11-29C8 RS 13q22.3~32.1(SC)
chr13 85Mb AL161428.16   B84980.1 SP6,
B84981.1 T7
13 RP11-142F6 RS 13q22.3~32.2(SC)
chr13 81Mb AL353628.7   AQ387338.1 T7  
13 RP11-454P4 R 13q31.1a(NCI)
chr13 80Mb AL157696.27   AQ586037.1 SP6,
AQ586040.1 T7
13 RP11-118K20 C 13q31.1(FHCRC)
chr13 83Mb   SHGC-20831 AQ347731.1 SP6  
13 RP11-89A14 C 13q31.1(FHCRC)
chr13 82Mb AL445255.8   AQ286846.1 T7,
AZ516955.1 SP6,
AQ286845.1 SP6
13 RP11-89E14 13q31.1(FHCRC)
chr14 40Mb     AZ517018.1 T7,
AQ282750.1 SP6
13 RP11-93G2 C 13q31.1(FHCRC)
chr13 77Mb   SHGC-14656 AQ322654.1 SP6  
13 RP11-100A3 C 13q31(FHCRC)
chr13 93Mb   SHGC-11720 AQ319422.1 SP6,
AQ319425.1 T7
13 RP11-120L14 RS 13q31.1~31.3(SC)
chr13 83Mb AL162493.21 SHGC-20831 AQ341738.1 SP6,
AQ341740.1 T7
13 RP11-143O10 S 13q31.1~31.3(SC)
chr13 88Mb AL353635.17   AQ371724.1 SP6,
AQ371727.1 T7
13 RP11-29P20 S 13q31.1~31.3(SC)
chr13 86Mb AL355578.4   B87657.1 T7,
AQ003177.1 SP6
13 RP11-30L8 S 13q31.1~31.3(SC)
chr13 85Mb AL354994.8   B85217.1 SP6,
B85218.1 T7
13 RP11-315A9 RS 13q31.1~31.3(SC)
chr13 87Mb AL162498.12   CL423336.1 T7,
CL423331.1 SP6
13 RP11-51C8 C 13q31(FHCRC)
chr13 86Mb   AFMC012YF1 AQ053545.1 ,
13 RP11-75E6 RS 13q31.1~31.3(SC)
chr13 89Mb AL139185.9   AQ267195.1 T7,
AQ267191.1 SP6
13 RP11-79H7 C 13q31(FHCRC)
chr13 89Mb     AQ284215.1 SP6,
AQ284218.1 T7
13 RP11-80N10 C 13q31(FHCRC)
chr13 80Mb     AQ317826.1 SP6,
AQ284186.1 T7
13 RP11-80P22 C 13q31(FHCRC)
chr13 86Mb     AQ319870.1 SP6,
AQ284221.1 T7
13 RP11-91O15 C 13q31(FHCRC)
chr13 83Mb     AQ282545.1 T7  
13 RP11-124B17 C 13q31~32(FHCRC)
chr13 93Mb AL139318.9   AQ343406.1 SP6,
AQ343408.1 T7
13 RP11-164B1 S 13q31.1~32.3(SC)
chr13 83Mb AL354835.8   AQ379374.1 SP6  
13 RP11-86C3 C 13q31~32(FHCRC)
chr13 89Mb AL158067.18 SHGC-2163 AQ283029.1 T7  
13 RP11-91O1 C 13q31~32(FHCRC)
chr13 89Mb     AQ282488.1 SP6  
13 RP11-165N12 CRS 13q31(FHCRC)
chr13 91Mb AL159152.11 SHGC-37261 AQ418312.1 SP6,
AQ418313.1 T7
13 RP11-121J7 S 13q31.2~32.1(SC)
chr13 90Mb AL138714.9   AQ351029.1 SP6,
AQ351032.1*u T7
13 RP11-27D9 S 13q31.2~32.1(SC)
chr13 88Mb AL157763.6   B82169.1 T7,
AQ003492.1 SP6
13 RP11-74A12 S 13q31.2~32.2(SC)
chr13 94Mb AL139381.24 SHGC-13746 AQ269084.1 SP6,
AQ238147.1*u T7
13 RP11-80B16 C 13q31.3(FHCRC)
chr13 92Mb     AQ283258.1 T7,
AQ283255.1 SP6
13 RP11-31K22 S 13q31.3~32.3(SC)
chr13 95Mb AL136104.8   AQ045923.1 ,
13 RP11-114G1 S 13q31.3~33.1(SC)
chr13 88Mb AL163533.14   AQ344761.1 T7,
AQ344758.1 SP6
13 RP11-195A5 RS 13q31.3~33.1(SC)
chr13 96Mb AL160393.13   AQ422258.1 SP6,
AQ422262.1 T7
13 RP11-632L2 R 13q31.3c(NCI)
chr13 92Mb AL354811.13   AQ493472.1 SP6,
AQ441472.1 T7
13 RP11-10E18 C 13q32(FHCRC)
chr13 95Mb AL138955.14   B72783.1 SP6,
B72784.1 T7
13 RP11-113F15 C 13q32(FHCRC)
chr13 99Mb   SHGC-17234 AQ341944.1 SP6,
AQ341946.1 T7
13 RP11-122A8 C 13q32(FHCRC)
chr13 98Mb AL391122.9 SHGC-9437 AQ342984.1 SP6  
13 RP11-14B13 C 13q32(FHCRC)
chr13 97Mb   SHGC-10171 B82247.1 SP6  
13 RP11-79A16 C 13q32(FHCRC)
chr13 95Mb     AQ282395.1 T7,
AQ628782.1 T7,
AZ519139.1 SP6,
AQ282392.1 SP6
13 RP11-23E3 C 13q32~33(FHCRC)
chr13 94Mb AL139376.17   AQ009023.1 T7,
B84300.1 SP6
13 RP11-7B23 C 13q32~33(FHCRC)
chr13 101Mb   SHGC-8465 B71965.1 SP6,
AZ517226.1 T7
13 RP11-318G11 RS 13q32.2~33.1(SC)
chr13 98Mb AL139084.9   AQ535737.1 T7,
AQ535735.1*u SP6
13 RP11-151A6 RS 13q32.2~33.3(SC)
chr13 99Mb AL136526.27   AQ377445.1 T7,
AQ377444.1*u SP6
13 RP11-366N24 S 13q32.2~33.3(SC)
chr13 101Mb AL136965.11   AQ547265.1 T7,
AQ527529.1 SP6
13 RP11-23M9 C 13q32.3~33.1(FHCRC)
chr13 98Mb AC016189.3 SHGC-31753 B84340.1 SP6,
AQ009371.1 T7,
B84341.1 T7
13 RP11-484I6 CS 13q32.3~33.3(SC)
chr13 102Mb AL157769.12   AQ630596.1 SP6,
AQ630598.1 T7
13 RP11-118F16 S 13q32.3~34(SC)
chr13 100Mb AL139374.18   AQ349321.1 SP6,
AQ349324.1 T7
13 RP11-100K21 S 13q33.1~33.3(SC)
chr13 104Mb AL138954.16   AQ321260.1 SP6,
AQ321263.1 T7
13 RP11-111L17 C 13q33(FHCRC)
chr13 101Mb   SHGC-4718 AQ341465.1 SP6,
AQ341466.1 T7
13 RP11-183A20 C 13q33(FHCRC)
chr13 107Mb   SHGC-36171 AQ416057.1 SP6,
AQ416060.1 T7
13 RP11-25E13 C 13q33(FHCRC)
chr13 105Mb   SHGC-2178 AQ014015.1 ,
B83193.1 SP6,
B83194.1 T7
13 RP11-36L18 C 13q33(FHCRC)
chr13 102Mb   SHGC-2173 AQ045753.1 SP6,
AQ045756.1 T7
13 RP11-45E4 C 13q33(FHCRC)
chr13 104Mb AC008024.2 SHGC-20838 AQ201119.1 ,
13 RP11-90C11 C 13q33(FHCRC)
chr13 100Mb     AQ281442.1 SP6,
AQ281450.1 T7
13 RP11-91E24 C 13q33(FHCRC)
chr13 104Mb     AQ285553.1 T7,
AQ285550.1 SP6
13 RP11-107H21 C 13q33~34(FHCRC)
chr13 108Mb   SHGC-10588 AQ322687.1 T7,
AQ322686.1*u SP6
Chr clone name Distributor1 FISH Placement on genome2 Placement summary3 Insert sequence4 STS4 BAC-ends4 Flag
13 RP11-141M24 S 13q33.1~34(SC)
chr13 108Mb AL136132.15   AQ386523.1 T7,
AQ386521.1 SP6
13 RP11-153I24 S 13q33.1~34(SC)
chr13 107Mb AL157762.13   AQ387318.1 SP6,
AQ387319.1 T7
13 RP11-207D10 S 13q33.1~34(SC)
chr13 106Mb AL163534.9   AQ415910.1 SP6,
AQ415911.1 T7
13 RP11-22O7 C 13q33~34(FHCRC)
chr13 110Mb AC013713.5 N49419 AQ008943.1 SP6,
B84262.1 SP6,
B84263.1 T7
13 RP11-29B2 C 13q33~34(FHCRC)
chr13 102Mb AL158063.12 T77959, SHGC-12524 B84968.1 T7  
13 RP11-313L9 CS 13q33.1~34(SC)
chr13 109Mb AL162497.20   AQ537697.1 T7,
AQ506841.1 SP6
13 RP11-346C4 S 13q33.1~34(SC)
chr13 107Mb AL136964.8   AQ541788.1 T7,
AQ541785.1 SP6
13 RP11-474D23 S 13q33.1~34(SC)
chr13 110Mb AL160395.24   AQ634626.1 T7  
13 RP11-61I17 C 13q33~34(FHCRC)
chr13 108Mb   SHGC-1474, SHGC-1474*u AQ237650.1 SP6  
13 RP11-46I10 R 13q33.1c(NCI)
chr13 101Mb AL159155.8   AQ201102.1 ,
CL423228.1 SP6,
CL423229.1 T7,
13 RP11-713K6 R 13q33.2a~33.2b(NCI)
chr13 105Mb AC021993.2   AQ437662.1 SP6,
CL423259.1 SP6,
CL423263.1 T7
13 RP11-265C7 S 13q33.3~34(SC)
chr13 112Mb AL162454.23   AQ489055.1 T7  
13 RP11-98F14 CRS 13q33.3~34(SC)
chr13 112Mb AL137002.19 H28922 AQ319420.1 T7,
AQ319417.1 SP6
13 RP11-94F16 R 13q33.3b(NCI)
chr13 107Mb AL139189.14   AQ323593.1 SP6,
AQ323595.1 T7
13 RP11-165M6 S 13q34(SC)
chr13 105Mb AL136159.11   AQ382060.1 T7,
AQ382057.1 SP6
13 RP11-19O15 C 13q34(FHCRC)
chr13 112Mb   SHGC-35218 B83029.1 T7  
13 RP11-3P8 C 13q34(FHCRC)
chr13 111Mb AC012129.2*u SHGC-2177 AQ316876.1 SP6,
B47994.1 T7
13 RP11-75F3 S 13q34(SC)
chr13 111Mb AL136302.16   AQ268332.1 T7  
13 RP11-8D7 C 13q34(FHCRC)
chr13 110Mb AL157820.27   B71414.1 SP6  
13 RP11-90L1 CR 13q34(FHCRC)
chr13 109Mb AL139385.12   AQ284465.1 SP6,
AZ518557.1 T7,
AQ284477.1 T7
13 RP11-91C11 C 13q34(FHCRC)
chr13 110Mb     AQ286354.1 SP6,
AQ286355.1*u T7
total220C:118 R:42 S:95220218 14673220 

1 Distributor: C, Children's hospical Oakland research institute; R, Research Genetics; S, Sanger Center

2 Placement of clones on the genome. Only clones that are localiized to one or two places on the same chromosome on the draft sequence are included

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.

4 Sequence-tag

  *d indicates sequences that disagree with placement on the genome.

  *u indicates seqeunces that didn't align to the genome or were not used for annotation because the clone was placed to multiple locations on the human genome.