Schizosaccharomyces japonicus
Representative genome: Schizosaccharomyces japonicus yFS275 (assembly SJ5)
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BLAST against Schizosaccharomyces japonicus genome

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ID: 445
Organism ImageSchizosaccharomyces japonicus

Genome used in a comparative analysis to elucidate fission yeast evolution

Lineage: Eukaryota[1540]; Fungi[590]; Dikarya[531]; Ascomycota[393]; Taphrinomycotina[11]; Schizosaccharomycetes[4]; Schizosaccharomycetales[4]; Schizosaccharomycetaceae[4]; Schizosaccharomyces[4]; Schizosaccharomyces japonicus[1]
A dimorphic fission yeast, capable of alternating between unicellular yeast form and multicellular true mycelium. Within the fission yeast clade, S. japonicus is an early diverging species and compared to S. pombe all 1:1 orthologs have an average amino acid identity of 55%. This fungus contain 10 families of gypsy-type retrotransposons, More...


Submitter: Broad Institute
Assembly level: Scaffold
Assembly: GCA_000149845.2 SJ5 scaffolds: 32 contigs: 87 N50: 1,768,158 L50: 3
BioProjects: PRJNA32667, PRJNA13640
Whole Genome Shotgun (WGS): INSDC: AATM00000000.2
Statistics: total length (Mb): 11.7332
 protein count: 4878
 GC%: 44.1


Genome Assembly Annotation

Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Gene Pseudogene
master WGS-AATM00000000.211.7343.84,878153315,2249

Other BioProjects

Genome Sequencing, no data1
Transcriptome or Gene expression3

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