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    LOC657024 glutamate receptor ionotropic, kainate 2 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657024, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC657024
    Gene description
    glutamate receptor ionotropic, kainate 2
    Locus tag
    TcasGA2_TC014487
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (4462209..4780246, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (11103363..11112521)

    Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene sodium/potassium/calcium exchanger 4 Neighboring gene sodium/potassium/calcium exchanger 4 Neighboring gene calcitonin gene-related peptide type 1 receptor Neighboring gene zinc finger protein 99 Neighboring gene uncharacterized LOC656853 Neighboring gene venom protease Neighboring gene general odorant-binding protein 69a Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene sodium channel protein Nach Neighboring gene SAP domain containing ribonucleoprotein Neighboring gene Ribosomal protein L8 Neighboring gene belle Neighboring gene aristaless Neighboring gene uncharacterized LOC103313164 Neighboring gene transcription initiation factor TFIID subunit 6-like Neighboring gene Cell division cycle 23 Neighboring gene NADH-quinone oxidoreductase subunit B 2-like Neighboring gene uncharacterized LOC107397980 Neighboring gene uncharacterized LOC135266341 Neighboring gene ultraviolet-B receptor UVR8 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene heat shock factor-binding protein 1 Neighboring gene TBC1 domain family member 20 Neighboring gene phospholipase A2 group XV Neighboring gene uncharacterized LOC103312913 Neighboring gene Fam92 Neighboring gene EGF-domain O-GlcNAc transferase Neighboring gene Aminolevulinate synthase Neighboring gene escargot Neighboring gene U5 spliceosomal RNA Neighboring gene slowmo Neighboring gene midway Neighboring gene crinkled

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutamate receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modulation of chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, glutamatergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamate receptor ionotropic, kainate 2
    Names
    AUGUSTUS-3.0.2_33172
    AUGUSTUS-3.0.2_33173
    GLEAN_14487
    Glutamate receptor 1-like Protein
    Glutamate receptor ionotropic, kainate 1-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

      Range
      4462209..4780246 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008195697.3 → XP_008193919.2  glutamate receptor ionotropic, kainate 2

    Nucleotide Protein Strain
    Heading Accession and Version

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