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    Acn Acinus [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 658123, updated on 12-Apr-2024

    Summary

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    Gene symbol
    Acn
    Gene description
    Acinus
    Locus tag
    TcasGA2_TC014271
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See Acn in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (7339216..7343080, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (8257039..8260893)

    Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135266362 Neighboring gene Tetratricopeptide repeat protein 2 Neighboring gene hypothetical protein Neighboring gene mitochondrial ribosomal protein L10 Neighboring gene uncharacterized protein Neighboring gene Transmembrane 9 superfamily protein member 2 Neighboring gene Methylcrotonoyl-CoA carboxylase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ASAP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    apoptotic chromatin condensation inducer in the nucleus
    Names
    GLEAN_14271
    apoptotic chromatin condensation inducer

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

      Range
      7339216..7343080 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008195431.3 → XP_008193653.1  apoptotic chromatin condensation inducer in the nucleus

      See identical proteins and their annotated locations for XP_008193653.1

      UniProtKB/TrEMBL
      D6WKZ2
      Conserved Domains (2) summary
      cd12432
      Location:594 → 680
      RRM_ACINU; RNA recognition motif in apoptotic chromatin condensation inducer in the nucleus (acinus) and similar proteins
      pfam16294
      Location:760 → 808
      RSB_motif; RNSP1-SAP18 binding (RSB) motif
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases