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    scaf scarface [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35505, updated on 4-Apr-2024

    Summary

    Official Symbol
    scafprovided by FlyBase
    Official Full Name
    scarfaceprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033033
    Locus tag
    Dmel_CG11066
    See related
    AllianceGenome:FB:FBgn0033033
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11066; CG15900; cSPH142; Dmel\CG11066; Scaf; scarf; SPH142
    Summary
    Involved in establishment or maintenance of epithelial cell apical/basal polarity; germ-band shortening; and morphogenesis of an epithelium. Located in cytoplasm and extracellular space. Colocalizes with apical plasma membrane and endosome. Is expressed in adult head; embryonic epidermis; embryonic/larval pericardial cell; extended germ band embryo; and ventral ectoderm. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See scaf in Genome Data Viewer
    Location:
    41F6-41F8; 2-55 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (5676750..5691723, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (1564255..1579228, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene kune-kune Neighboring gene Cytosolic non-specific dipeptidase 2 Neighboring gene vulcan

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    mobile_element

    • Loc: c5678202-5678146 mobile_element_type = transposon:baggins{}5698
    • Loc: c5679027-5678594 mobile_element_type = transposon:INE-1{}5088

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables peptidase activity IKR
    Inferred from Key Residues
    more info
     
    NOT enables serine-type endopeptidase activity IKR
    Inferred from Key Residues
    more info
    PubMed 
    Component Evidence Code Pubs
    colocalizes_with apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with early endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with late endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with recycling endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    scarface
    Names
    CG11066-PA
    CG11066-PB
    scaf-PA
    scaf-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      5676750..5691723 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136336.3NP_610180.1  scarface, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610180.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7K5M0
      Related
      FBpp0085396
      Conserved Domains (2) summary
      cd00190
      Location:428616
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      cl28087
      Location:198334
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
    2. NM_165441.2NP_724424.1  scarface, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724424.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7K5M0
      Related
      FBpp0085397
      Conserved Domains (2) summary
      cd00190
      Location:428616
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      cl28087
      Location:198334
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]