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    YPT31 Rab family GTPase YPT31 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856753, updated on 13-Apr-2024

    Summary

    Gene symbol
    YPT31
    Gene description
    Rab family GTPase YPT31
    Primary source
    SGD:S000000833
    Locus tag
    YER031C
    See related
    AllianceGenome:SGD:S000000833
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    YPT8
    Summary
    Enables GTPase activity. Involved in early endosome to Golgi transport and exocytosis. Located in endosome and trans-Golgi network. Orthologous to several human genes including RAB11A (RAB11A, member RAS oncogene family). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_001137.3 (214076..214747, complement)

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene mRNA splicing protein SMB1 Neighboring gene Chz1p Neighboring gene Fir1p Neighboring gene Zrg8p

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in early endosome to Golgi transport IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in exocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in exocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in vesicle-mediated transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane HDA PubMed 
    located_in mitochondrion HDA PubMed 
    is_active_in recycling endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in trans-Golgi network IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Rab family GTPase YPT31
    NP_010948.1
    • Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3 Reference assembly

      Range
      214076..214747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178922.1NP_010948.1  TPA: Rab family GTPase YPT31 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010948.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DLT0, P38555
      UniProtKB/TrEMBL
      A0A6A5Q0Y6, A6ZQY0, B3LS44, B5VHG6, C7GSH8, C8Z733, G2WCR4, N1P4S1
      Conserved Domains (1) summary
      cd01868
      Location:11175
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25